Search common motifs in selected sequences


  
Motifs : pf:Arabinose_bdArabinose-binding domain of AraC transcription regulator, N-term
 pf:CMS1U3-containing 90S pre-ribosomal complex subunit
 pf:DnaG_DnaB_bindDNA primase DnaG DnaB-binding
 pf:HTH_11HTH domain
 pf:HTH_18Helix-turn-helix domain
 pf:HTH_20Helix-turn-helix domain
 pf:HTH_23Homeodomain-like domain
 pf:HTH_29Winged helix-turn helix
 pf:HTH_33Winged helix-turn helix
 pf:HTH_36Helix-turn-helix domain
 pf:HTH_38Helix-turn-helix domain
 pf:HTH_7Helix-turn-helix domain of resolvase
 pf:HTH_AraCBacterial regulatory helix-turn-helix proteins, AraC family
 pf:HTH_MgaM protein trans-acting positive regulator (MGA) HTH domain
 pf:HTH_Tnp_ISL3Helix-turn-helix domain of transposase family ISL3
 pf:MSG_insertion
 pf:PI3K_P85_iSH2Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
 pf:SGNH
 pf:Sigma70_r4_2Sigma-70, region 4
 pf:SurA_NSurA N-terminal domain

palk:PSAKL28_52050 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_23

palv:KSS97_00540 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

panh:HU763_024280 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

panr:A7J50_5797 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_AraC

parh:I5S86_01370 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_20 pf:HTH_18 pf:HTH_38 pf:HTH_7 pf:HTH_23 pf:HTH_AraC

pasi:LG197_04545 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

pata:JWU58_01000 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_AraC

paze:KSS91_00355 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_AraC

pazo:AYR47_06465 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Tnp_ISL3 pf:HTH_AraC

pba:PSEBR_a106 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_20 pf:HTH_AraC

pbc:CD58_29415 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pbz:GN234_17670 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_AraC

pcas:LOY40_28845 pf:Arabinose_bd pf:HTH_36 pf:SurA_N pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pcg:AXG94_14975 pf:Arabinose_bd pf:HTH_36 pf:SurA_N pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pch:EY04_29965 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pchp:C4K32_6214 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pcp:JM49_00650 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pcuc:PSH97_27980 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

pcz:PCL1606_00780 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pdw:BV82_2231 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_Mga pf:HTH_23

pfb:VO64_2960 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_11 pf:HTH_33 pf:HTH_AraC

pfc:PflA506_5358 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_11 pf:HTH_23 pf:HTH_AraC

pfe:PSF113_0101 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_AraC

pff:PFLUOLIPICF708645 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_AraC

pfit:KJY40_00540 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_29 pf:HTH_AraC

pfk:PFAS1_11495 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_20 pf:HTH_AraC

pfl:PFL_6142 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_AraC

pfn:HZ99_17210 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_29 pf:HTH_11 pf:HTH_20 pf:HTH_33 pf:HTH_AraC

pfo:Pfl01_5630 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_29 pf:HTH_AraC

pfs:PFLU_6060 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_11 pf:HTH_29 pf:HTH_AraC

pfw:PF1751_v1c54700 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_AraC

pfx:A7318_26990 pf:Arabinose_bd pf:HTH_36 pf:SurA_N pf:HTH_18 pf:HTH_11 pf:HTH_29 pf:HTH_Mga pf:HTH_23 pf:HTH_AraC

pfz:AV641_22510 pf:Arabinose_bd pf:MSG_insertion pf:HTH_36 pf:HTH_18 pf:HTH_AraC

pgf:J0G10_00550 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_AraC

pgg:FX982_03904 pf:Arabinose_bd pf:HTH_36 pf:HTH_29 pf:HTH_18 pf:HTH_11 pf:HTH_23 pf:HTH_AraC

pgy:AWU82_06815 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_29 pf:HTH_AraC

phom:KJF94_26190 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:PI3K_P85_iSH2 pf:HTH_AraC

phv:HU739_018115 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

phyg:JTY93_27070 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_11 pf:HTH_Tnp_ISL3 pf:HTH_23 pf:HTH_AraC

pie:HU724_000590 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_AraC

pix:RIN61_11560 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

piz:LAB08_R59750 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_AraC

pju:L1P09_24925 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

pke:DLD99_28570 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_29 pf:HTH_AraC

pkj:Q1W70_10680 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pkk:QQ992_27705 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

pkr:AYO71_00465 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_AraC

plg:NCTC10937_03045 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_11 pf:HTH_23 pf:HTH_AraC

plq:AA042_10710 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_29 pf:HTH_Mga pf:HTH_33 pf:HTH_AraC

pman:OU5_3535 pf:Arabinose_bd pf:HTH_11 pf:HTH_18 pf:HTH_AraC

pmed:E3Z27_28015 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:SurA_N pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pmoe:HV782_000595 pf:Arabinose_bd pf:SGNH pf:SurA_N pf:HTH_36 pf:HTH_18 pf:HTH_AraC

pmon:X969_25650 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

pmot:X970_25285 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

pmud:NCTC8068_05362 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_Mga pf:HTH_AraC

pnb:NK667_27885 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_20 pf:HTH_AraC

poi:BOP93_25970 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_Mga pf:HTH_AraC

ppae:LDL65_10745 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_11 pf:HTH_33 pf:HTH_38 pf:HTH_AraC

ppb:PPUBIRD1_0009 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

ppeg:KUA23_29655 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11

ppf:Pput_5248 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

ppg:PputGB1_5388 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

ppi:YSA_04915 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

ppii:QL104_31120 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_11 pf:HTH_AraC

ppj:RK21_04977 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

pprc:PFLCHA0_c61030 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_AraC

ppro:PPC_6095 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_AraC

ppsh:G5J76_02680 pf:Arabinose_bd pf:MSG_insertion pf:HTH_23 pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_29 pf:HTH_Mga pf:HTH_AraC

ppsy:AOC04_19960 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_33 pf:HTH_23 pf:HTH_AraC

ppt:PPS_5188 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

ppud:DW66_5759 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

ppuh:B479_26430 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

pput:L483_31830 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

ppuu:PputUW4_05376 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_AraC

ppw:PputW619_0134 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:SurA_N pf:HTH_20 pf:HTH_18 pf:Sigma70_r4_2 pf:HTH_23 pf:HTH_AraC

ppx:T1E_3973 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

prhz:CRX69_25890 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_Mga pf:HTH_23 pf:HTH_AraC

prx:HRH33_00515 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_11 pf:HTH_18 pf:HTH_AraC

psam:HU731_015705 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_AraC

psem:TO66_31185 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

psep:C4K39_3519 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pshh:HU773_000625 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_11 pf:HTH_29 pf:HTH_23 pf:HTH_AraC

psii:NF676_27130 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_AraC

psil:PMA3_29750 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_Mga pf:HTH_20 pf:Sigma70_r4_2 pf:HTH_23 pf:HTH_AraC

psjy:AA098_00280 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

psk:U771_31320 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_23 pf:HTH_AraC

psos:POS17_6103 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_AraC

ptae:NCTC10697_04439 pf:CMS1 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_29 pf:HTH_Mga pf:HTH_AraC

ptai:ICN73_06725 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

ptk:EXN22_01195 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_Mga pf:HTH_23

ptol:I7845_28585 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

ptrt:HU722_0000490 pf:Arabinose_bd pf:HTH_36 pf:HTH_18

ptv:AA957_14835 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_AraC

ptz:HU718_000590 pf:Arabinose_bd pf:MSG_insertion pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_AraC

pum:HGP31_10815 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:Sigma70_r4_2 pf:HTH_23 pf:HTH_AraC

pvk:EPZ47_29515 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pvr:PverR02_30995 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pvw:HU752_000600 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_23 pf:HTH_AraC

pym:AK972_6017 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_AraC

pza:HU749_001425 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_20 pf:HTH_AraC

pze:HU754_000595 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_AraC