Search common motifs in selected sequences


  
Motifs : pf:Big_4Bacterial Ig-like domain (group 4)
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_C
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DNA_primase_SDNA primase small subunit
 pf:DUF1999Protein of unknown function (DUF1999)
 pf:FAD-oxidase_CFAD linked oxidases, C-terminal domain
 pf:HCV_NS5a_1aHepatitis C virus non-structural 5a zinc finger domain
 pf:HSBP1Heat shock factor binding protein 1
 pf:LigD_NDNA polymerase Ligase (LigD)
 pf:LigD_Prim-Pol
 pf:MAGE_NMelanoma associated antigen family N terminal
 pf:MepB-like
 pf:Myosin_NMyosin N-terminal SH3-like domain
 pf:NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenase
 pf:Planc_extracelPlanctomycete extracellular
 pf:PolyA_pol_RNAbdProbable RNA and SrmB- binding site of polymerase A
 pf:RNA_ligaseRNA ligase
 pf:Radical_SAM_CRadical_SAM C-terminal domain
 pf:Rng_hyd_C
 pf:SPORSporulation related domain
 pf:TetR_C_11Bacterial transcriptional repressor C-terminal
 pf:Urocanase_C
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

aoi:AORI_5517 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C pf:LigD_Prim-Pol

amd:AMED_3255 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

amm:AMES_3220 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

amn:RAM_16560 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

amz:B737_3220 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

aprt:MUY14_19135 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

aacd:LWP59_20600 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

alo:CRK57032 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

ume:RM788_08230 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

sesp:BN6_34290 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

aja:AJAP_07090 pf:DNA_ligase_A_C pf:LigD_Prim-Pol

nhy:JQS43_02725 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

sbae:DSM104329_04323 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

bala:DSM104299_02990 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

led:BBK82_33360 pf:LigD_Prim-Pol

cros:N8J89_20080 pf:LigD_Prim-Pol

dco:SAMEA4475696_1756 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol

pdx:Psed_4989 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

bsol:FSW04_15890 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C pf:LigD_Prim-Pol

cwo:Cwoe_4716 pf:LigD_N pf:DUF1999 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

kphy:AOZ06_37985 pf:LigD_Prim-Pol pf:PolyA_pol_RNAbd

aori:SD37_31830 pf:LigD_Prim-Pol

amyb:BKN51_01545 pf:LigD_Prim-Pol pf:Radical_SAM_C

amq:AMETH_1315 pf:LigD_Prim-Pol pf:DNA_primase_S

pbaj:LRS13_17790 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C pf:LigD_Prim-Pol

amyc:CU254_41245 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

athm:L1857_09145 pf:LigD_Prim-Pol pf:DNA_primase_S pf:HSBP1

aroo:NQK81_13580 pf:LigD_Prim-Pol

sen:SACE_3549 pf:LigD_Prim-Pol pf:Big_4

parn:NBH00_15315 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

kut:JJ691_02400 pf:LigD_N pf:LigD_Prim-Pol

sace:GIY23_11510 pf:LigD_Prim-Pol

now:GBF35_44150 pf:LigD_Prim-Pol pf:MepB-like

svi:Svir_34930 pf:LigD_Prim-Pol pf:NAD_binding_2

arhd:VSH64_15040 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

ngn:LCN96_49260 pf:LigD_Prim-Pol

pmad:BAY61_28610 pf:LigD_Prim-Pol

ncx:Nocox_36390 pf:LigD_Prim-Pol

acta:C1701_04545 pf:LigD_Prim-Pol pf:DNA_primase_S

nfs:OIE67_55075 pf:LigD_Prim-Pol pf:MepB-like

rant:RHODO2019_08180 pf:LigD_Prim-Pol

mhai:OHB01_04335 pf:LigD_Prim-Pol

noa:BKM31_52070 pf:LigD_Prim-Pol pf:MepB-like

sacc:EYD13_19400 pf:LigD_Prim-Pol

acty:OG774_04885 pf:LigD_N pf:LigD_Prim-Pol

blap:MVA48_01920 pf:LigD_Prim-Pol

bsd:BLASA_3097 pf:LigD_Prim-Pol

agra:AGRA3207_005929 pf:LigD_Prim-Pol pf:DNA_primase_S

spiq:OHA34_30835 pf:LigD_Prim-Pol pf:DNA_primase_S

gnt:KP003_20190 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

hcam:I4484_04370 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

tbi:Tbis_2991 pf:LigD_Prim-Pol pf:MepB-like

htx:EKK97_05265 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

tcu:Tcur_1207 pf:LigD_Prim-Pol pf:DNA_primase_S

mmar:MODMU_2076 pf:LigD_Prim-Pol

simp:C6571_07475 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

phh:AFB00_25885 pf:LigD_Prim-Pol pf:DNA_primase_S

actw:F7P10_31565 pf:LigD_Prim-Pol pf:DNA_primase_S

paut:Pdca_34170 pf:LigD_N pf:LigD_Prim-Pol

cazt:LV780_05725 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

amaz:LUW76_36945 pf:LigD_Prim-Pol pf:DNA_primase_S

gob:Gobs_2121 pf:LigD_Prim-Pol

hsx:HNO51_04330 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rhy:RD110_14845 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Planc_extracel pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rsq:Rsph17025_1218 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ade:Adeh_0784 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pecq:AD017_26855 pf:LigD_Prim-Pol

pseq:AD006_19015 pf:LigD_Prim-Pol

gem:GM21_0109 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ppaf:I8N54_04725 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

nmv:NITMOv2_2657 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S pf:FAD-oxidase_C

psea:WY02_02275 pf:LigD_Prim-Pol pf:TetR_C_11

beba:BWI17_11510 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:Urocanase_C pf:LigD_Prim-Pol

lsx:H8B22_07395 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

deq:XM25_14700 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:DNA_ligase_C pf:LigD_Prim-Pol pf:DNA_primase_S

pol:Bpro_3003 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

hco:LOKO_00656 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ccaz:COUCH_37505 pf:LigD_Prim-Pol

lare:HIV01_004680 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

pwi:MWN52_02350 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S pf:SPOR

cfh:C1707_22550 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

uru:DSM104443_03088 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

yti:FNA67_18405 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_C pf:LigD_Prim-Pol pf:DNA_primase_S

mprn:Q3V37_04730 pf:LigD_Prim-Pol

hrb:Hrubri_2562 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:MAGE_N pf:LigD_Prim-Pol pf:DNA_primase_S

amyy:YIM_01445 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

geo:Geob_0336 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

gsub:KP001_16080 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pkg:LW136_12060 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mich:FJK98_02715 pf:LigD_Prim-Pol

afs:AFR_02065 pf:LigD_Prim-Pol

ppel:H6H00_23855 pf:LigD_Prim-Pol

psc:A458_10100 pf:LigD_N pf:Myosin_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pls:VT03_22120 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

auz:Sa4125_04490 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mtem:GCE86_28015 pf:LigD_Prim-Pol

kfl:Kfla_5357 pf:LigD_Prim-Pol pf:DNA_primase_S

llh:I41_37950 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

saq:Sare_4351 pf:LigD_Prim-Pol

scl:sce3523 pf:HCV_NS5a_1a pf:DNA_ligase_A_M pf:RNA_ligase pf:Rng_hyd_C pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

avm:JQX13_02395 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S