Search common motifs in selected sequences


  
Motifs : pf:3HCDH_RFF
 pf:B12-bindingB12 binding domain
 pf:BATSBiotin and Thiamin Synthesis associated domain
 pf:BMFPMembrane fusogenic activity
 pf:CBP_BcsFCellulose biosynthesis protein BcsF
 pf:CENP-B_NCENP-B N-terminal DNA-binding domain
 pf:CMV_1aCucumber mosaic virus 1a protein family
 pf:CbiCPrecorrin-8X methylmutase
 pf:ComA(2R)-phospho-3-sulfolactate synthase (ComA)
 pf:DBD_HTH
 pf:DHQS3-dehydroquinate synthase (EC 4.6.1.3)
 pf:DMAP1_likePutative DMAP1-like
 pf:DUF134Protein of unknown function DUF134
 pf:DUF2089Protein of unknown function (DUF2089)
 pf:DUF3071Protein of unknown function (DUF3071)
 pf:DUF433Protein of unknown function (DUF433)
 pf:DUF5631
 pf:DUF5736
 pf:DUF6362
 pf:DUF742Protein of unknown function (DUF742)
 pf:EFG_III
 pf:EutK_CEthanolamine utilization protein EutK C-terminus
 pf:GerEBacterial regulatory proteins, luxR family
 pf:Glycos_transf_N3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
 pf:HTH_1Bacterial regulatory helix-turn-helix protein, lysR family
 pf:HTH_10HTH DNA binding domain
 pf:HTH_11HTH domain
 pf:HTH_20Helix-turn-helix domain
 pf:HTH_22HTH domain
 pf:HTH_23Homeodomain-like domain
 pf:HTH_24Winged helix-turn-helix DNA-binding
 pf:HTH_28Helix-turn-helix domain
 pf:HTH_29Winged helix-turn helix
 pf:HTH_30PucR C-terminal helix-turn-helix domain
 pf:HTH_36Helix-turn-helix domain
 pf:HTH_38Helix-turn-helix domain
 pf:HTH_40Helix-turn-helix domain
 pf:HTH_5Bacterial regulatory protein, arsR family
 pf:HTH_7Helix-turn-helix domain of resolvase
 pf:HTH_AsnC-typeAsnC-type helix-turn-helix domain
 pf:HTH_IclRIclR helix-turn-helix domain
 pf:HTH_Tnp_1Transposase
 pf:HTH_Tnp_ISL3Helix-turn-helix domain of transposase family ISL3
 pf:HemY_NHemY protein N-terminus
 pf:Lipase_GDSL_2GDSL-like Lipase/Acylhydrolase family
 pf:MarRMarR family
 pf:MarR_2MarR family
 pf:PIN_9
 pf:Peripla_BP_4Periplasmic binding protein domain
 pf:PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin system
 pf:Reductase_CReductase C-terminal
 pf:RepBRepB plasmid partitioning protein
 pf:Response_regResponse regulator receiver domain
 pf:Response_reg_2
 pf:Ribosomal_S19Ribosomal protein S19
 pf:SATase_NSerine acetyltransferase, N-terminal
 pf:Sigma70_ECFECF sigma factor
 pf:Sigma70_r4Sigma-70, region 4
 pf:Sigma70_r4_2Sigma-70, region 4
 pf:TadZ_NPilus assembly protein TadZ N-terminal
 pf:Terminase_5Putative ATPase subunit of terminase (gpP-like)
 pf:TetR_C_28
 pf:Trans_reg_CTranscriptional regulatory protein, C terminal
 pf:TranspeptidasePenicillin binding protein transpeptidase domain
 pf:Trp_repressorTrp repressor protein
 pf:WavEWavE lipopolysaccharide synthesis
 pf:Xre-like-HTH
 pf:YAcAr
 pf:pRN1_helicalPrimase helical domain

ava:Ava_C0116 pf:Response_reg pf:Sigma70_ECF pf:EutK_C pf:GerE pf:Sigma70_r4 pf:HTH_38 pf:HTH_24 pf:HTH_23 pf:HTH_28 pf:HTH_IclR pf:Sigma70_r4_2 pf:HTH_29 pf:Xre-like-HTH pf:HTH_40

ann:EH233_09420 pf:Response_reg pf:Sigma70_ECF pf:EutK_C pf:GerE pf:Sigma70_r4 pf:HTH_38 pf:HTH_24 pf:HTH_23 pf:HTH_28 pf:HTH_IclR pf:Sigma70_r4_2 pf:HTH_29 pf:Xre-like-HTH pf:HTH_40

oni:Osc7112_6613 pf:Response_reg pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_24 pf:HTH_23 pf:HTH_28 pf:HTH_IclR pf:HTH_40 pf:Xre-like-HTH

ana:alr2138 pf:Response_reg pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_24 pf:HTH_23 pf:HTH_IclR pf:HTH_28 pf:HTH_40 pf:Xre-like-HTH

nfl:COO91_10730 pf:EFG_III pf:Response_reg pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_23 pf:HTH_IclR pf:HTH_28 pf:Sigma70_r4_2 pf:HTH_40 pf:HTH_24

mic:Mic7113_1727 pf:Response_reg pf:EutK_C pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_24 pf:Sigma70_ECF pf:HTH_23 pf:HTH_28 pf:HTH_IclR pf:HTH_29 pf:HTH_40 pf:Xre-like-HTH

nsh:GXM_07660 pf:EFG_III pf:Response_reg pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_24 pf:HTH_23 pf:HTH_28 pf:HTH_IclR pf:HTH_29 pf:HTH_40 pf:Xre-like-HTH

gdu:P0S91_26860 pf:Response_reg pf:EutK_C pf:GerE pf:Sigma70_r4 pf:HTH_38 pf:HTH_24 pf:HTH_23 pf:HTH_28 pf:Sigma70_r4_2 pf:Xre-like-HTH pf:HTH_40

syn:slr0312 pf:Response_reg pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_23 pf:HTH_28 pf:Sigma70_r4_2 pf:HTH_40 pf:HTH_24

syo:C7I86_14225 pf:Response_reg pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_23 pf:HTH_28 pf:Sigma70_r4_2 pf:HTH_40 pf:HTH_24

syq:SYNPCCP_2717 pf:Response_reg pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_23 pf:HTH_28 pf:Sigma70_r4_2 pf:HTH_40 pf:HTH_24

sys:SYNPCCN_2717 pf:Response_reg pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_23 pf:HTH_28 pf:Sigma70_r4_2 pf:HTH_40 pf:HTH_24

syt:SYNGTI_2718 pf:Response_reg pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_23 pf:HTH_28 pf:Sigma70_r4_2 pf:HTH_40 pf:HTH_24

syy:SYNGTS_2719 pf:Response_reg pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_23 pf:HTH_28 pf:Sigma70_r4_2 pf:HTH_40 pf:HTH_24

syz:MYO_127450 pf:Response_reg pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_23 pf:HTH_28 pf:Sigma70_r4_2 pf:HTH_40 pf:HTH_24

len:LEP3755_59320 pf:Response_reg pf:EutK_C pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_23 pf:HTH_28 pf:Sigma70_ECF pf:Sigma70_r4_2 pf:HTH_40 pf:HTH_36 pf:HTH_24

kov:K9N68_20125 pf:Response_reg pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:RepB pf:HTH_24 pf:Sigma70_ECF pf:HTH_23 pf:HTH_28 pf:HTH_IclR pf:HTH_40 pf:Xre-like-HTH

gei:GEI7407_1857 pf:Response_reg pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_38 pf:HTH_24 pf:HTH_23 pf:HTH_28 pf:HTH_IclR pf:HTH_40 pf:Xre-like-HTH

lbo:LBWT_56710 pf:Response_reg pf:DUF742 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:Sigma70_ECF pf:HTH_24 pf:RepB pf:HTH_38 pf:HTH_23 pf:HTH_7 pf:HTH_28 pf:HTH_40 pf:HTH_29 pf:Xre-like-HTH pf:Terminase_5

cthe:Chro_3921 pf:DHQS pf:Response_reg pf:Sigma70_ECF pf:EutK_C pf:GerE pf:Sigma70_r4 pf:HTH_38 pf:HTH_24 pf:HTH_23 pf:HTH_28 pf:HTH_IclR pf:Sigma70_r4_2 pf:HTH_29 pf:HTH_40

hbq:QI031_29515 pf:Response_reg pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_23 pf:HTH_7 pf:HTH_28 pf:HTH_40 pf:HTH_24

acy:Anacy_1153 pf:Response_reg pf:ComA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_24 pf:HTH_23

caln:NIES2098_31250 pf:DHQS pf:Response_reg pf:Sigma70_r4_2 pf:Sigma70_r4 pf:DUF2089 pf:GerE pf:HTH_23 pf:HTH_28

noe:CLI64_16615 pf:Response_reg pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:DUF2089 pf:HTH_23 pf:HTH_28 pf:HTH_29 pf:HTH_5 pf:HTH_40 pf:HTH_38 pf:HTH_20 pf:HTH_11 pf:HTH_24 pf:HTH_10

calo:Cal7507_3662 pf:Response_reg pf:Sigma70_r4_2 pf:GerE pf:Sigma70_r4 pf:HTH_23 pf:HTH_28 pf:HTH_24 pf:HTH_10

non:NOS3756_21000 pf:Response_reg pf:Sigma70_r4_2 pf:GerE pf:Sigma70_r4 pf:DUF2089 pf:HTH_23 pf:HTH_28 pf:HTH_38 pf:HTH_24

nos:Nos7107_4298 pf:Response_reg pf:Sigma70_r4_2 pf:GerE pf:Sigma70_r4 pf:Sigma70_ECF pf:DUF2089 pf:HTH_23 pf:HTH_28 pf:HTH_29 pf:HTH_5 pf:HTH_40 pf:HTH_38 pf:HTH_20 pf:HTH_24 pf:HTH_10

npu:Npun_R2407 pf:Response_reg pf:3HCDH_RFF pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_23 pf:HTH_28 pf:HTH_29 pf:HTH_38

synp:Syn7502_03195 pf:Response_reg pf:HTH_7 pf:GerE pf:HTH_38 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:Sigma70_ECF pf:HTH_40 pf:HTH_28 pf:HTH_23 pf:HTH_20 pf:HTH_29 pf:HTH_24 pf:DUF433 pf:Xre-like-HTH pf:HTH_30 pf:HTH_10

cyj:Cyan7822_4830 pf:Response_reg pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_24 pf:HTH_23 pf:HTH_5 pf:HTH_20 pf:CENP-B_N pf:HTH_40 pf:HTH_38 pf:HTH_10

gml:ISF26_04590 pf:Response_reg pf:SATase_N pf:Sigma70_r4 pf:Sigma70_r4_2 pf:DUF2089 pf:GerE pf:HTH_23 pf:HTH_24

amr:AM1_6313 pf:Response_reg pf:Sigma70_r4 pf:GerE pf:Sigma70_r4_2 pf:DUF2089 pf:HTH_24 pf:HTH_38 pf:HTH_23 pf:HTH_11 pf:HTH_28 pf:HTH_5 pf:HTH_7 pf:HTH_40 pf:HTH_20 pf:HTH_29 pf:HTH_10

gvi:gll1683 pf:Response_reg pf:Sigma70_r4 pf:Sigma70_r4_2 pf:DUF2089 pf:GerE pf:HTH_23 pf:HTH_24

glj:GKIL_4456 pf:Response_reg pf:YAcAr pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_23

cyn:Cyan7425_1929 pf:Response_reg pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38 pf:HTH_23 pf:HTH_40

aca:ACP_2113 pf:Response_reg pf:TadZ_N pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:DUF2089 pf:CENP-B_N pf:HTH_23 pf:HTH_11 pf:HTH_28 pf:HTH_24 pf:HTH_40 pf:HTH_38 pf:HTH_20 pf:HTH_AsnC-type pf:HTH_5 pf:HTH_36 pf:HTH_10

ccot:CCAX7_61570 pf:Response_reg pf:Sigma70_r4_2 pf:GerE pf:Sigma70_r4 pf:HTH_23 pf:HTH_28 pf:HTH_38 pf:HTH_24

adin:H7849_19095 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2 pf:HTH_24 pf:DUF2089

abas:ACPOL_2007 pf:Response_reg pf:Sigma70_r4 pf:GerE pf:HTH_23 pf:Sigma70_r4_2 pf:HTH_24

gba:J421_5698 pf:Response_reg pf:3HCDH_RFF pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_23 pf:HTH_28 pf:HTH_38

uru:DSM104443_04000 pf:Response_reg pf:YAcAr pf:YAcAr pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2 pf:HTH_23 pf:HTH_28 pf:HTH_36

gau:GAU_3314 pf:Response_reg pf:GerE pf:Sigma70_r4_2 pf:HTH_23 pf:HTH_38

sus:Acid_2188 pf:Response_reg pf:GerE pf:Sigma70_r4_2

grb:GOB94_04060 pf:Response_reg pf:YAcAr pf:GerE pf:Sigma70_r4 pf:HTH_23 pf:HTH_28

aba:Acid345_2443 pf:Response_reg pf:WavE pf:Sigma70_r4 pf:GerE pf:Sigma70_r4_2

orp:MOP44_07280 pf:Response_reg pf:CbiC pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:DUF2089 pf:HTH_11 pf:HTH_28 pf:Sigma70_ECF pf:HTH_23 pf:HTH_40 pf:HTH_24 pf:HTH_36 pf:HTH_10 pf:HTH_5 pf:HTH_20

trs:Terro_2912 pf:Response_reg pf:GerE pf:HTH_23 pf:CENP-B_N pf:HTH_24 pf:Sigma70_r4_2 pf:Sigma70_r4

age:AA314_03968 pf:Response_reg pf:DUF5736 pf:BATS pf:MarR_2 pf:Sigma70_ECF pf:DUF134 pf:Sigma70_r4 pf:GerE pf:HTH_23 pf:HTH_29 pf:HTH_28 pf:DUF2089 pf:Sigma70_r4_2 pf:HTH_24 pf:HTH_10 pf:HTH_Tnp_ISL3

pfer:IRI77_22360 pf:Response_reg pf:YAcAr pf:GerE pf:Sigma70_r4 pf:HTH_23 pf:HTH_28 pf:HTH_24 pf:Sigma70_r4_2 pf:Trans_reg_C

abac:LuPra_00573 pf:Response_reg pf:Trp_repressor pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_23 pf:HTH_28 pf:HTH_38 pf:HTH_24 pf:HemY_N

cfus:CYFUS_007438 pf:Response_reg pf:Peripla_BP_4 pf:BATS pf:MarR_2 pf:pRN1_helical pf:Sigma70_ECF pf:Sigma70_r4 pf:GerE pf:Sigma70_r4_2 pf:HTH_23 pf:HTH_28 pf:HTH_7 pf:HTH_Tnp_ISL3 pf:HTH_24 pf:DUF2089 pf:HTH_10

avm:JQX13_45735 pf:Response_reg pf:BATS pf:MarR_2 pf:DUF3071 pf:Sigma70_ECF pf:Sigma70_r4 pf:GerE pf:Sigma70_r4_2 pf:DUF6362 pf:HTH_28 pf:HTH_23 pf:HTH_24 pf:DUF2089 pf:HTH_10

glp:Glo7428_5038 pf:Response_reg pf:YAcAr pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38 pf:GerE pf:DUF2089 pf:HTH_11 pf:HTH_23 pf:HTH_28 pf:HTH_40 pf:HTH_24 pf:HTH_AsnC-type pf:HTH_10

dji:CH75_12730 pf:Response_reg pf:Sigma70_r4_2 pf:GerE pf:Sigma70_r4 pf:HTH_23 pf:HTH_28 pf:HTH_7

xbc:ELE36_08675 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2 pf:HTH_24

acm:AciX9_0567 pf:Response_reg pf:CbiC pf:GerE pf:Sigma70_r4_2 pf:DUF2089 pf:HTH_24

dtl:H8F01_20730 pf:Response_reg pf:GerE pf:DUF6362 pf:Sigma70_r4 pf:Sigma70_r4_2 pf:HTH_23 pf:HTH_28 pf:DUF2089 pf:HTH_7 pf:HTH_29 pf:HTH_40 pf:Sigma70_ECF pf:HTH_10 pf:Terminase_5 pf:HTH_24 pf:HTH_36 pf:HTH_11

gma:AciX8_3107 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:HTH_28 pf:DUF2089 pf:HTH_10 pf:HTH_11

ote:Oter_1284 pf:Response_reg pf:Sigma70_ECF pf:DUF2089 pf:Sigma70_r4 pf:GerE pf:HTH_23 pf:HTH_28 pf:Sigma70_r4_2 pf:HTH_10

grw:FTO74_09715 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2 pf:HTH_11

sti:Sthe_1552 pf:Response_reg pf:B12-binding pf:PhdYeFM_antitox pf:DUF3071 pf:TetR_C_28 pf:DUF742 pf:GerE pf:CENP-B_N pf:Sigma70_r4 pf:Sigma70_r4_2 pf:MarR pf:Sigma70_ECF pf:HTH_23 pf:HTH_28 pf:HTH_20 pf:HTH_IclR pf:HTH_7 pf:HTH_40 pf:HTH_38 pf:HTH_24 pf:DUF2089 pf:HTH_5 pf:HTH_10

eda:GWR55_09360 pf:Response_reg pf:YAcAr pf:PIN_9 pf:CMV_1a pf:Sigma70_r4 pf:GerE pf:Sigma70_r4_2 pf:Sigma70_ECF pf:HTH_11 pf:DUF433 pf:DUF2089 pf:HTH_23 pf:HTH_28 pf:HTH_20 pf:HTH_38 pf:HTH_40 pf:HTH_24 pf:HTH_36 pf:HTH_AsnC-type pf:HTH_5 pf:HTH_10

ggr:HKW67_19695 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2 pf:Sigma70_ECF pf:HTH_23 pf:HTH_28 pf:HTH_38

dug:HH213_28470 pf:Response_reg pf:3HCDH_RFF pf:GerE

mfb:MFUL124B02_15080 pf:Response_reg pf:DUF3071 pf:Sigma70_r4 pf:GerE pf:Sigma70_r4_2 pf:Sigma70_ECF pf:HTH_28 pf:HTH_23 pf:HTH_Tnp_ISL3 pf:HTH_24 pf:HTH_10 pf:DUF2089

scab:LZK98_00755 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2 pf:HTH_23 pf:HTH_40

hbs:IPV69_12640 pf:Response_reg pf:Response_reg_2 pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:DUF2089 pf:HTH_23 pf:HTH_28 pf:HTH_24 pf:HTH_10

mmar:MODMU_1073 pf:Response_reg pf:GerE pf:HTH_23 pf:Sigma70_r4 pf:Sigma70_r4_2

obg:Verru16b_00993 pf:Response_reg pf:Sigma70_r4_2 pf:Sigma70_r4 pf:DUF742 pf:Sigma70_ECF pf:GerE pf:HTH_38 pf:HTH_23 pf:HTH_28 pf:HTH_40 pf:HTH_24

roo:G5S37_02790 pf:Response_reg pf:Sigma70_ECF pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_10 pf:HTH_5 pf:DUF2089 pf:HTH_23 pf:HTH_24 pf:HTH_28 pf:HTH_40 pf:RepB pf:HTH_7 pf:HTH_38 pf:Terminase_5

sby:H7H31_18140 pf:Response_reg pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:CENP-B_N pf:DBD_HTH pf:HTH_23

pmex:H4W19_07035 pf:Response_reg pf:Peripla_BP_4 pf:MarR_2 pf:Sigma70_ECF pf:GerE pf:Sigma70_r4 pf:DUF2089 pf:HTH_23 pf:HTH_38 pf:HTH_28 pf:HTH_29 pf:Sigma70_r4_2 pf:HTH_24 pf:HTH_10

dvc:Dvina_26865 pf:Response_reg pf:Sigma70_r4_2 pf:GerE pf:Sigma70_r4 pf:HTH_23 pf:HTH_40

aagg:ETAA8_21750 pf:Response_reg pf:Sigma70_ECF pf:DUF742 pf:Sigma70_r4 pf:GerE pf:Sigma70_r4_2 pf:HTH_23 pf:HTH_38

mali:EYF70_28455 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:HTH_28 pf:Sigma70_r4_2

ssan:NX02_12580 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2 pf:Sigma70_ECF pf:HTH_23 pf:HTH_29 pf:HTH_28 pf:HTH_Tnp_ISL3 pf:HTH_40 pf:HTH_38 pf:HTH_24 pf:HTH_AsnC-type pf:HTH_10 pf:DUF2089 pf:HTH_5

sur:STAUR_7505 pf:Response_reg pf:YAcAr pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:DUF2089 pf:HTH_23 pf:HTH_40 pf:HTH_28 pf:HTH_10 pf:HTH_24 pf:HTH_11

kfl:Kfla_2450 pf:Response_reg pf:GerE pf:HTH_23 pf:Sigma70_r4_2 pf:HTH_24

mfla:GO485_03725 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2 pf:HTH_10

cse:Cseg_2097 pf:Response_reg pf:B12-binding pf:Lipase_GDSL_2 pf:CBP_BcsF pf:GerE pf:Sigma70_r4 pf:BMFP pf:HTH_23 pf:HTH_28 pf:Sigma70_r4_2 pf:HTH_40 pf:DUF2089

psul:AU252_16690 pf:Response_reg pf:Sigma70_r4 pf:GerE pf:Sigma70_ECF pf:HTH_23 pf:HTH_28 pf:HTH_38 pf:Sigma70_r4_2 pf:HTH_40 pf:HTH_24

roi:N4261_17285 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:HTH_1 pf:HTH_23 pf:HTH_28 pf:HTH_Tnp_1 pf:HTH_38 pf:DUF2089 pf:Sigma70_r4_2 pf:HTH_Tnp_ISL3 pf:HTH_22 pf:HTH_24 pf:HTH_10 pf:HTH_11

talb:FTW19_19990 pf:Response_reg pf:Reductase_C pf:DUF5631 pf:GerE pf:Sigma70_r4 pf:HTH_23 pf:HTH_11

tsa:AciPR4_1240 pf:Response_reg pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_11 pf:HTH_38 pf:HTH_40 pf:HTH_23 pf:Sigma70_ECF pf:HTH_28 pf:Terminase_5 pf:HTH_24

cak:Caul_0621 pf:Response_reg pf:YAcAr pf:Peripla_BP_4 pf:Sigma70_r4_2 pf:GerE pf:Sigma70_r4 pf:DUF6362 pf:DUF2089 pf:HTH_23 pf:HTH_40

nya:LTV02_08910 pf:Response_reg pf:Glycos_transf_N pf:CENP-B_N pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4

gex:GETHOR_27810 pf:Response_reg pf:DUF6362 pf:DUF2089 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:HTH_5 pf:HTH_IclR pf:HTH_23 pf:HTH_24 pf:HTH_10

sgal:CP966_34125 pf:Response_reg pf:CENP-B_N pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38 pf:HTH_23

snos:K8P63_09390 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:HTH_28 pf:Sigma70_r4_2 pf:HTH_40 pf:HTH_24 pf:HTH_36

blap:MVA48_11385 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2

dja:HY57_13345 pf:Response_reg pf:DMAP1_like pf:Sigma70_r4_2 pf:GerE pf:Sigma70_r4 pf:HTH_23 pf:HTH_28 pf:HTH_Tnp_ISL3 pf:HTH_29 pf:HTH_40 pf:DUF2089 pf:HTH_10

amyc:CU254_35050 pf:Response_reg pf:TadZ_N pf:Sigma70_ECF pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_23 pf:HTH_28 pf:CENP-B_N pf:HTH_38 pf:HTH_40

kbu:Q4V64_53035 pf:Response_reg pf:CENP-B_N pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2 pf:HTH_38 pf:HTH_23

kqi:F1D05_32210 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:Sigma70_ECF pf:HTH_23 pf:Sigma70_r4_2 pf:HTH_24

poq:KZX46_00290 pf:Response_reg pf:Ribosomal_S19 pf:GerE pf:Sigma70_r4

smob:J7W19_15440 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2

amyb:BKN51_29585 pf:Response_reg pf:TadZ_N pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_23 pf:HTH_28 pf:HTH_38 pf:HTH_40 pf:HTH_24 pf:HTH_AsnC-type

strc:AA958_10105 pf:Response_reg pf:GerE pf:Sigma70_r4_2 pf:Sigma70_r4 pf:CENP-B_N pf:HTH_23 pf:HTH_38

noz:DMB37_04690 pf:Response_reg pf:GerE pf:Sigma70_r4 pf:Sigma70_r4_2 pf:HTH_38 pf:HTH_23 pf:HTH_40

splm:BXU08_06530 pf:Response_reg pf:YAcAr pf:Peripla_BP_4 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:GerE pf:DUF6362 pf:HTH_40 pf:HTH_29 pf:Sigma70_ECF pf:HTH_38 pf:HTH_10

amaz:LUW76_31600 pf:Response_reg pf:Transpeptidase pf:CENP-B_N pf:GerE pf:Sigma70_r4 pf:HTH_23 pf:HTH_38 pf:Sigma70_r4_2