Search common motifs in selected sequences


  
Motifs : pf:AHHA nuclease family of the HNH/ENDO VII superfamily with conserved AHH
 pf:ApoLApolipoprotein L
 pf:ApoLp-IIIApolipophorin-III precursor (apoLp-III)
 pf:ApolipoproteinApolipoprotein A1/A4/E domain
 pf:Arm-DNA-bind_4
 pf:ArsRArsR transcriptional regulator
 pf:AsmA_1AsmA-like C-terminal region
 pf:CA_like
 pf:CHASE3CHASE3 domain
 pf:CI-B14_5aNADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a)
 pf:COG3_N
 pf:CYAA_C
 pf:CdvA
 pf:Col-Pyo_DNase
 pf:Colicin-DNaseDNase/tRNase domain of colicin-like bacteriocin
 pf:DLP_helical
 pf:DNA_gyraseA_CDNA gyrase C-terminal domain, beta-propeller
 pf:DUF1129Protein of unknown function (DUF1129)
 pf:DUF1487Protein of unknown function (DUF1487)
 pf:DUF1993Domain of unknown function (DUF1993)
 pf:DUF2076Uncharacterized protein conserved in bacteria (DUF2076)
 pf:DUF2203Uncharacterized conserved protein (DUF2203)
 pf:DUF2380Predicted lipoprotein of unknown function (DUF2380)
 pf:DUF2408Protein of unknown function (DUF2408)
 pf:DUF2937Protein of unknown function (DUF2937)
 pf:DUF3106Protein of unknown function (DUF3106)
 pf:DUF3450Protein of unknown function (DUF3450)
 pf:DUF3592Protein of unknown function (DUF3592)
 pf:DUF3683Protein of unknown function (DUF3683)
 pf:DUF4085Protein of unknown function (DUF4085)
 pf:DUF4381Domain of unknown function (DUF4381)
 pf:DUF4419Domain of unknown function (DUF4419)
 pf:DUF4473Domain of unknown function (DUF4473)
 pf:DUF4749Domain of unknown function (DUF4749)
 pf:DUF4945Domain of unknown function (DUF4945)
 pf:DUF5319
 pf:DUF5340
 pf:DUF5563
 pf:DUF6006
 pf:DUF6165
 pf:DUF6674
 pf:DUF6779
 pf:DUF6838
 pf:EndoU_bacteriaBacterial EndoU nuclease
 pf:Endonuclea_NS_2DNA/RNA non-specific endonuclease
 pf:Endonuclease_NSDNA/RNA non-specific endonuclease
 pf:FadAAdhesion protein FadA
 pf:Fib_alphaFibrinogen alpha/beta chain family
 pf:FlgMAnti-sigma-28 factor, FlgM
 pf:FliG_NFliG N-terminal domain
 pf:G1_gp67_C
 pf:Glutaredoxin2_CGlutaredoxin 2, C terminal domain
 pf:Gp6-like_1st
 pf:GrpEGrpE
 pf:HNHHNH endonuclease
 pf:HalXHalX domain
 pf:HrpB7Bacterial type III secretion protein (HrpB7)
 pf:IL5Interleukin 5
 pf:LHHA nuclease of the HNH/ENDO VII superfamily with conserved LHH
 pf:LXGLXG domain of WXG superfamily
 pf:Lipase_GDSLGDSL-like Lipase/Acylhydrolase
 pf:MAP70Microtubule-associated protein 70
 pf:MICSWaPSpore wall protein
 pf:MRPMitochondrial RNA binding protein MRP
 pf:MazG-likeMazG-like family
 pf:Mce4_CUP1Cholesterol uptake porter CUP1 of Mce4, putative
 pf:MitofilinMitochondrial inner membrane protein
 pf:Mlf1IPMyelodysplasia-myeloid leukemia factor 1-interacting protein
 pf:Nif11Nitrogen fixation protein of unknown function
 pf:Ntox30Bacterial toxin 30
 pf:Nuc_NNuclease N terminal
 pf:PKD_3PKD-like domain
 pf:PPEPPE family
 pf:PT-TGPre-toxin TG
 pf:Peptidase_M16Insulinase (Peptidase family M16)
 pf:Phage_GPDPhage late control gene D protein (GPD)
 pf:Phage_base_VType VI secretion system, phage-baseplate injector
 pf:PhasinPoly(hydroxyalcanoate) granule associated protein (phasin)
 pf:Plasmo_rep
 pf:Pox_A_type_incViral A-type inclusion protein repeat
 pf:PromininProminin
 pf:QRPTase_CQuinolinate phosphoribosyl transferase, C-terminal domain
 pf:RNA_pol_I_A49A49-like RNA polymerase I associated factor
 pf:RasGAP_CRasGAP C-terminus
 pf:Rossmann-likeRossmann-like domain
 pf:Rx_N
 pf:SR_plectin_7
 pf:SWIRM-assoc_1SWIRM-associated region 1
 pf:Sde2_N_Ubi
 pf:SidC_lipid-bd
 pf:SopASopA-like central domain
 pf:SpectrinSpectrin repeat
 pf:Spidroin_N
 pf:SseCSecretion system effector C (SseC) like family
 pf:Syntaxin_2Syntaxin-like protein
 pf:TBCC_NTubulin-specific chaperone C N-terminal domain
 pf:TIP120TATA-binding protein interacting (TIP20)
 pf:TNT
 pf:Tlp
 pf:Tox-HNH-HHHHNH/Endo VII superfamily nuclease toxin with a HHH motif
 pf:Tox-SHHHNH/Endo VII superfamily toxin with a SHH signature
 pf:UN_NPL4Nuclear pore localisation protein NPL4
 pf:WHHA nuclease of the HNH/ENDO VII superfamily with conserved WHH
 pf:WXG100Proteins of 100 residues with WXG
 pf:WipA_N
 pf:Xpo1Exportin 1-like protein
 pf:dsRBD2
 pf:zinc_ribbon_11Probable zinc-ribbon

baer:BAE_16145 pf:LXG pf:Endonuclea_NS_2

balt:CFN77_09070 pf:LXG pf:Endonuclea_NS_2

baei:RE735_11130 pf:LXG pf:Endonuclea_NS_2

bpum:BW16_09120 pf:LXG pf:Pox_A_type_inc pf:Endonuclea_NS_2

bxi:BK049_18380 pf:LXG pf:Endonuclea_NS_2

bpu:BPUM_1652 pf:LXG pf:Endonuclea_NS_2

bacw:QR42_08480 pf:LXG pf:DUF1129 pf:Endonuclea_NS_2 pf:Endonuclease_NS

bsaf:BSL056_08510 pf:LXG pf:DUF4473 pf:Endonuclea_NS_2

bpus:UP12_08520 pf:LXG pf:RNA_pol_I_A49 pf:zinc_ribbon_11

bteq:G4P54_03710 pf:LXG pf:Endonuclea_NS_2

bama:RBAU_2161 pf:LXG pf:Endonuclea_NS_2

bry:M0696_03915 pf:LXG pf:Endonuclea_NS_2

bgi:BGM20_18555 pf:LXG pf:SseC pf:Endonuclea_NS_2

bht:DIC78_06415 pf:LXG pf:Endonuclea_NS_2

bacl:BS34A_07790 pf:LXG pf:Endonuclea_NS_2

bsh:BSU6051_06812 pf:LXG pf:Endonuclea_NS_2

bsp:U712_03445 pf:LXG pf:Endonuclea_NS_2

bsq:B657_06812 pf:LXG pf:Endonuclea_NS_2

bsu:BSU06812 pf:LXG pf:Endonuclea_NS_2

bsul:BSUA_00753 pf:LXG pf:Endonuclea_NS_2

bsut:BSUB_00753 pf:LXG pf:Endonuclea_NS_2

baml:BAM5036_0639 pf:LXG pf:Mlf1IP pf:DUF4945 pf:CYAA_C pf:Endonuclea_NS_2

bacy:QF06_02305 pf:LXG pf:SseC pf:Endonuclea_NS_2

bit:BIS30_14015 pf:LXG pf:SseC pf:Endonuclea_NS_2

bss:BSUW23_03455 pf:LXG pf:SseC pf:Endonuclea_NS_2

balm:BsLM_0715 pf:LXG pf:Endonuclea_NS_2

bamt:AJ82_04010 pf:LXG pf:Mlf1IP pf:DUF4945 pf:Endonuclea_NS_2

bacp:SB24_06250 pf:LXG pf:Mlf1IP pf:DUF4945 pf:CYAA_C pf:Endonuclea_NS_2

bsr:I33_0769 pf:LXG pf:Endonuclea_NS_2

bsy:I653_03425 pf:LXG pf:Endonuclea_NS_2

bsx:C663_0707 pf:LXG pf:Endonuclea_NS_2

bamc:U471_06970 pf:LXG pf:Mlf1IP pf:DUF4945 pf:Endonuclea_NS_2

bay:RBAM_007220 pf:LXG pf:Mlf1IP pf:DUF4945 pf:Endonuclea_NS_2

bamp:B938_03400 pf:LXG pf:Mlf1IP pf:DUF4945 pf:Endonuclea_NS_2

baq:BACAU_0688 pf:LXG pf:Mlf1IP pf:DUF4945 pf:Endonuclea_NS_2

bmoj:HC660_07250 pf:LXG pf:Endonuclea_NS_2

bso:BSNT_07059 pf:LXG pf:DUF4945 pf:Endonuclea_NS_2

bvm:B9C48_03595 pf:LXG pf:DUF4945 pf:SWIRM-assoc_1 pf:Endonuclea_NS_2 pf:SidC_lipid-bd

bamn:BASU_0680 pf:LXG pf:Mlf1IP pf:DUF4945 pf:SWIRM-assoc_1 pf:Endonuclea_NS_2 pf:SidC_lipid-bd

bamf:U722_03575 pf:LXG pf:Mlf1IP pf:DUF4945 pf:Endonuclea_NS_2

bacs:AUL54_07195 pf:LXG pf:Spidroin_N pf:Mlf1IP pf:DUF4945 pf:Endonuclea_NS_2

bsia:CWD84_18415 pf:LXG pf:Spidroin_N pf:Mlf1IP pf:DUF4945 pf:Endonuclea_NS_2

bami:KSO_016180 pf:LXG pf:Mlf1IP pf:DUF4945 pf:Endonuclea_NS_2

bsl:A7A1_1722 pf:LXG pf:Endonuclea_NS_2

bamb:BAPNAU_1157 pf:LXG pf:SR_plectin_7 pf:DUF6779 pf:HalX pf:Colicin-DNase pf:WHH

bmp:NG74_02528 pf:LXG pf:SR_plectin_7 pf:DUF6779 pf:HalX pf:Colicin-DNase pf:WHH

bamy:V529_19080 pf:LXG pf:LHH

bacb:OY17_11860 pf:LXG pf:DUF5340 pf:MazG-like pf:LHH

bya:BANAU_1869 pf:LXG pf:DUF5340 pf:MazG-like pf:LHH

bao:BAMF_1821 pf:LXG pf:LHH

vg:1261322 pf:LXG pf:Tox-SHH pf:DUF3106 pf:FliG_N

bql:LL3_02389 pf:DUF5340 pf:LXG pf:QRPTase_C pf:Colicin-DNase pf:DUF4419 pf:Arm-DNA-bind_4 pf:WHH

bae:BATR1942_06570 pf:LXG pf:Rossmann-like pf:LHH

bld:BLi01315 pf:LXG pf:DUF2408 pf:DUF1993 pf:Nif11 pf:Endonuclea_NS_2 pf:Endonuclease_NS

bxh:BAXH7_00668 pf:SWIRM-assoc_1 pf:Endonuclea_NS_2

pfri:L8956_20670 pf:LXG pf:Nif11 pf:LHH

pbut:DTO10_06660 pf:LXG pf:Nif11 pf:EndoU_bacteria

bstr:QI003_02735 pf:LXG pf:Nif11 pf:LHH

bcao:LC087_11750 pf:LXG pf:PT-TG pf:Endonuclea_NS_2

bsj:UP17_20100 pf:LXG pf:Nif11 pf:EndoU_bacteria

ntx:NQZ71_20970 pf:LXG pf:PT-TG pf:Endonuclea_NS_2

bmur:ABE28_018745 pf:LXG pf:Nif11 pf:FlgM pf:AHH

bst:GYO_0939 pf:LXG pf:DUF5340

bjs:MY9_0538 pf:LXG pf:LHH

bsn:BSn5_15295 pf:LXG

bsus:Q433_03835 pf:LXG

baz:BAMTA208_05950 pf:LXG pf:HNH

bqy:MUS_0706 pf:LXG pf:Col-Pyo_DNase pf:Tox-HNH-HHH

bcab:EFK13_13500 pf:LXG pf:DUF4945 pf:LHH

biq:AN935_13775 pf:LXG pf:DUF4945 pf:LHH

bzh:NF868_07995 pf:WXG100 pf:LXG pf:PT-TG pf:PT-TG pf:EndoU_bacteria

stea:C0679_02580 pf:LXG

fpn:ABE65_018940 pf:LXG pf:Xpo1 pf:PT-TG pf:CA_like pf:Endonuclea_NS_2

rmf:D5E69_04680 pf:LXG pf:FadA pf:MAP70 pf:Glutaredoxin2_C pf:Fib_alpha pf:Endonuclea_NS_2 pf:Endonuclease_NS

bmq:BMQ_2683 pf:LXG pf:PT-TG pf:Endonuclea_NS_2

vne:CFK40_03940 pf:LXG pf:Gp6-like_1st pf:Endonuclea_NS_2 pf:Endonuclease_NS

blh:BaLi_c23030 pf:LXG pf:DUF5319 pf:LHH

bson:S101395_00952 pf:LXG pf:DUF6006 pf:Nif11

bgy:BGLY_1896 pf:LXG pf:WipA_N pf:HrpB7 pf:DUF3450 pf:LHH

ble:BleG1_0553 pf:LXG pf:Endonuclea_NS_2 pf:Endonuclease_NS

bhk:B4U37_03570 pf:LXG pf:IL5 pf:GrpE pf:Endonuclea_NS_2

pks:IE339_07700 pf:LXG pf:DUF5563 pf:UN_NPL4 pf:Ntox30

ptl:AOT13_14835 pf:LXG pf:Mce4_CUP1 pf:Syntaxin_2 pf:CHASE3 pf:TBCC_N pf:DUF2380

baqu:K6959_02880 pf:LXG pf:DUF2203 pf:Rx_N pf:Spectrin pf:Peptidase_M16 pf:ArsR pf:PT-TG

msem:GMB29_26170 pf:LXG pf:DUF3683 pf:PT-TG pf:AHH pf:DNA_gyraseA_C

vir:X953_04445 pf:LXG pf:PT-TG

aamy:GFC30_2899 pf:DLP_helical pf:CdvA pf:Apolipoprotein pf:DUF6674 pf:Mitofilin pf:ApoLp-III pf:Prominin pf:WXG100 pf:Lipase_GDSL pf:MICSWaP pf:Apolipoprotein pf:DUF6674 pf:Phasin pf:MICSWaP pf:ApoLp-III pf:DUF2076 pf:DUF3592 pf:PKD_3 pf:Endonuclea_NS_2

plen:EIM92_22290 pf:Phage_GPD pf:Phage_base_V pf:Endonuclea_NS_2 pf:Endonuclease_NS

tei:QS257_18180 pf:LXG pf:PT-TG pf:Endonuclea_NS_2

bli:BL01823 pf:LXG pf:TIP120 pf:Tlp pf:DUF4381 pf:DUF4749 pf:DUF6165 pf:Plasmo_rep

meku:HUW50_08660 pf:LXG pf:SidC_lipid-bd pf:MRP pf:PT-TG

btf:YBT020_11315 pf:WXG100 pf:SopA pf:DUF6838 pf:PPE pf:dsRBD2 pf:PT-TG pf:Endonuclea_NS_2 pf:Endonuclease_NS

anx:ACH33_11765 pf:Endonuclea_NS_2 pf:Endonuclease_NS

pasa:BAOM_3329 pf:DUF4085 pf:Nif11 pf:FlgM pf:AHH

gmc:GY4MC1_0450 pf:CI-B14_5a pf:Endonuclea_NS_2 pf:Endonuclease_NS

bfx:BC359_15330 pf:LXG pf:AsmA_1 pf:G1_gp67_C

bha:BH3705 pf:LXG pf:DUF1487 pf:PT-TG pf:Endonuclea_NS_2

mdg:K8L98_02605 pf:LXG pf:PT-TG pf:Colicin-DNase pf:Sde2_N_Ubi pf:WHH

caun:CLAUR_021520 pf:LXG pf:COG3_N pf:RasGAP_C pf:ApoL pf:Endonuclea_NS_2

bpac:LMD38_10570 pf:Nuc_N pf:Endonuclea_NS_2

vhl:BME96_03645 pf:LXG pf:DUF2937 pf:PT-TG pf:TNT