Search common motifs in selected sequences


  
Motifs : pf:ABC2_membrane_7
 pf:ADP_ribosyl_GHADP-ribosylglycohydrolase
 pf:ANAPC3Anaphase-promoting complex, cyclosome, subunit 3
 pf:Acetyltransf_2N-acetyltransferase
 pf:ApeCC-terminal domain of apextrin
 pf:CAT_RBDCAT RNA binding domain
 pf:CMASMycolic acid cyclopropane synthetase
 pf:CSD'Cold-shock' DNA-binding domain
 pf:Caud_bapl16_3rd
 pf:DNA_pol_B_exo1DNA polymerase family B, exonuclease domain
 pf:DNA_pol_B_exo2Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
 pf:DUF1266Protein of unknown function (DUF1266)
 pf:DUF1389Protein of unknown function (DUF1389)
 pf:DUF3871Domain of unknown function, B. Theta Gene description (DUF3871)
 pf:DUF5625
 pf:DUF6340
 pf:Desmo_NViral Desmoplakin N-terminus
 pf:EpmCElongation factor P hydroxylase
 pf:Lipoprotein_16Uncharacterized lipoprotein
 pf:PPRPPR repeat
 pf:PPR_1PPR repeat
 pf:PPR_2PPR repeat family
 pf:ProfilinProfilin
 pf:RNase_H_2RNase_H superfamily
 pf:RNase_TExonuclease
 pf:Rrn7_cyclin_C
 pf:SLATT_5
 pf:Sel1Sel1 repeat
 pf:Sugar_trSugar (and other) transporter
 pf:TPR-S
 pf:TPR_1Tetratricopeptide repeat
 pf:TPR_10Tetratricopeptide repeat
 pf:TPR_12Tetratricopeptide repeat
 pf:TPR_14Tetratricopeptide repeat
 pf:TPR_16Tetratricopeptide repeat
 pf:TPR_18Tetratricopeptide repeat
 pf:TPR_19Tetratricopeptide repeat
 pf:TPR_2Tetratricopeptide repeat
 pf:TPR_20Tetratricopeptide repeat
 pf:TPR_6Tetratricopeptide repeat
 pf:TPR_7Tetratricopeptide repeat
 pf:TPR_8Tetratricopeptide repeat
 pf:TaxilinMyosin-like coiled-coil protein
 pf:Wyosine_formWyosine base formation

balt:CFN77_10500 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

bpum:BW16_10675 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

baer:BAE_17665 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

bxi:BK049_17175 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:DUF5625 pf:DUF6340

bsaf:BSL056_10950 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Acetyltransf_2 pf:DUF6340

bacw:QR42_09910 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:DUF6340

bpu:BPUM_1953 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

bpus:UP12_09955 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:DUF5625 pf:TPR_6 pf:DUF6340

bson:S101395_02248 pf:RNase_H_2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:DUF6340

blh:BaLi_c24450 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

bld:BLi02357 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

bli:BL02735 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

bgy:BGLY_2615 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:ABC2_membrane_7

bae:BATR1942_08965 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DUF3871 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_18 pf:TPR_2

bmoj:HC660_21010 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:ANAPC3

bht:DIC78_20370 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_10

bcab:EFK13_11265 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:ANAPC3 pf:TPR_10 pf:TPR-S

bsl:A7A1_2910 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:TPR_10 pf:TPR-S

bteq:G4P54_11645 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_19

bsr:I33_2281 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10

balm:BsLM_2164 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_14 pf:TPR_6 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10 pf:TPR-S

bsn:BSn5_01580 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_14 pf:TPR_6 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10 pf:TPR-S

bsus:Q433_12115 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_14 pf:TPR_6 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10 pf:TPR-S

bsx:C663_2094 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:TPR_10

bsy:I653_10585 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:TPR_10

bry:M0696_10965 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19

bjs:MY9_2226 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:TPR_10 pf:TPR-S

bso:BSNT_08615 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_14 pf:TPR_6 pf:TPR_19 pf:TPR_10 pf:TPR-S

bacy:QF06_09305 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10 pf:TPR-S

biq:AN935_10810 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_10

bacl:BS34A_24490 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10

bit:BIS30_00750 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_10

bsh:BSU6051_22210 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10

bsp:U712_10750 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10

bsq:B657_22210 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10

bss:BSUW23_10890 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_10

bstr:QI003_11025 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_6 pf:TPR_16 pf:TPR_19 pf:TPR_10 pf:TPR-S

bsu:BSU22210 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10

bsul:BSUA_02388 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10

bsut:BSUB_02388 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_20 pf:TPR_6 pf:TPR_14 pf:TPR_16 pf:TPR_19 pf:ANAPC3 pf:TPR_10

bst:GYO_2447 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19

bamb:BAPNAU_1551 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bao:BAMF_2121 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:ADP_ribosyl_GH pf:TPR_19 pf:TPR_12 pf:TPR_2 pf:TPR_6 pf:TPR_7 pf:TPR_16 pf:TPR_10

baz:BAMTA208_05865 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:ADP_ribosyl_GH pf:TPR_19 pf:TPR_12 pf:TPR_2 pf:TPR_6 pf:TPR_7 pf:TPR_16 pf:TPR_10

bmp:NG74_02134 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bql:LL3_02402 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:ADP_ribosyl_GH pf:TPR_19 pf:TPR_12 pf:TPR_2 pf:TPR_6 pf:TPR_7 pf:TPR_16 pf:TPR_10

bxh:BAXH7_01227 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:ADP_ribosyl_GH pf:TPR_19 pf:TPR_12 pf:TPR_2 pf:TPR_6 pf:TPR_7 pf:TPR_16 pf:TPR_10

bacb:OY17_13460 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bqy:MUS_2465 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bya:BANAU_2187 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bamc:U471_21000 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bay:RBAM_020360 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bvm:B9C48_10355 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bamy:V529_23030 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:DUF1266 pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

baml:BAM5036_1963 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bamp:B938_10525 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bama:RBAU_2175 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_12 pf:TPR_2 pf:TPR_6 pf:TPR_16

bamf:U722_11135 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_2 pf:TPR_6 pf:TPR_16

bami:KSO_009240 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_2 pf:TPR_6 pf:TPR_16

baq:BACAU_2044 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_2 pf:TPR_6 pf:TPR_16

bacp:SB24_18530 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bacs:AUL54_19635 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_2 pf:TPR_6 pf:TPR_16

bamt:AJ82_11575 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_2 pf:TPR_6 pf:TPR_16

bsia:CWD84_10780 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_2 pf:TPR_6 pf:TPR_16

bamn:BASU_1965 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Caud_bapl16_3rd pf:TPR_19 pf:TPR_12 pf:TPR_2 pf:TPR_6 pf:TPR_16

csua:IM538_15405 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:TPR_2 pf:TPR_12

pbut:DTO10_02075 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

cspg:LS684_13040 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

bacq:DOE78_15840 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

baci:B1NLA3E_14560 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

msut:LC048_06735 pf:RNase_H_2 pf:RNase_T pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:DUF6340

bda:FSZ17_14705 pf:RNase_H_2 pf:DNA_pol_B_exo1 pf:CSD pf:DUF6340 pf:Sel1

bcir:C2I06_08035 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:TPR_2 pf:SLATT_5

bmur:ABE28_014000 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

acai:ISX45_07460 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:CMAS pf:TPR_8 pf:TPR_2

meku:HUW50_26030 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:TPR_2 pf:DUF6340

bif:N288_16765 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:TPR_2 pf:TPR_16

bmet:BMMGA3_10510 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:EpmC pf:TPR_12

bsj:UP17_15110 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:CAT_RBD

msem:GMB29_16310 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Taxilin pf:TPR_2

mdg:K8L98_16185 pf:RNase_H_2 pf:DNA_pol_B_exo1 pf:DNA_pol_B_exo2 pf:Profilin

mjo:FOF60_15810 pf:RNase_H_2 pf:DNA_pol_B_exo1 pf:DUF6340

pfri:L8956_15830 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

apak:AP3564_16915 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:PPR pf:PPR_2 pf:PPR_1

bcoh:BC6307_10235 pf:RNase_H_2 pf:DNA_pol_B_exo1 pf:TPR_1 pf:TPR_2 pf:TPR_8 pf:TPR_12

acop:RI196_11445 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:PPR pf:PPR_2 pf:PPR_1

bmh:BMWSH_3801 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:TPR_14

bmeg:BG04_3723 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:TPR_14

bmd:BMD_1410 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:TPR_14

bko:CKF48_19165 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:DUF6340

cfir:NAF01_17305 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:DUF1389 pf:DUF6340 pf:Desmo_N

bbad:K7T73_11385 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Lipoprotein_16

csoa:LIS82_17945 pf:RNase_H_2 pf:RNase_T pf:DNA_pol_B_exo1 pf:DUF6340

bmq:BMQ_1429 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:TPR_14 pf:TPR_12

gwc:GWCH70_1909 pf:RNase_H_2 pf:DNA_pol_B_exo1 pf:TPR-S

ptb:DER53_13990 pf:RNase_H_2 pf:DNA_pol_B_exo1 pf:TPR-S

cgot:J1899_13910 pf:RNase_H_2 pf:DNA_pol_B_exo1 pf:TPR_12 pf:TPR_19 pf:PPR

nmk:CHR53_18620 pf:Wyosine_form pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:TPR_16 pf:TPR_8 pf:TPR_12 pf:TPR_1

ndt:L1999_20055 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:Rrn7_cyclin_C pf:Sugar_tr pf:TPR_1

ntx:NQZ71_09475 pf:ApeC pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1

bfx:BC359_13860 pf:RNase_H_2 pf:DNA_pol_B_exo2 pf:DNA_pol_B_exo1 pf:TPR_2 pf:TPR_12 pf:TPR_7