Search common motifs in selected sequences


  
Motifs : pf:Alpha_TIFAlpha trans-inducing protein (Alpha-TIF)
 pf:Caerin_1
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_C
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DNA_primase_SDNA primase small subunit
 pf:DUF4817Domain of unknown function (DUF4817)
 pf:DUF4985Domain of unknown function
 pf:DUF5655
 pf:DUF6259
 pf:Exo_endo_phosEndonuclease/Exonuclease/phosphatase family
 pf:Flavodoxin_3Flavodoxin domain
 pf:GH3GH3 auxin-responsive promoter
 pf:GPAT_C
 pf:GlypicanGlypican
 pf:HDHD domain
 pf:KAsynt_C_assocKetoacyl-synthetase C-terminal extension
 pf:LigD_NDNA polymerase Ligase (LigD)
 pf:LigD_Prim-Pol
 pf:MAGE_NMelanoma associated antigen family N terminal
 pf:MucinMucin-like glycoprotein
 pf:Planc_extracelPlanctomycete extracellular
 pf:RNA_ligaseRNA ligase
 pf:RipplyTranscription Regulator
 pf:TGT_C1C1 domain of tRNA-guanine transglycosylase dimerisation
 pf:TropomodulinTropomodulin
 pf:UvrA_inter
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

cmr:Cycma_1183 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DUF6259

camu:CA2015_1090 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:Flavodoxin_3 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DUF6259

salt:AO058_01020 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

asl:Aeqsu_3115 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

zpr:ZPR_3654 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

gfl:GRFL_2087 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

gfo:GFO_0300 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:GH3

grl:LPB144_07705 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cbal:M667_13175 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

marm:YQ22_16380 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

nia:A8C56_12060 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

nso:NIASO_02455 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

chu:CHU_2837 pf:LigD_N pf:Tropomodulin pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:Glypican pf:Mucin pf:LigD_Prim-Pol pf:DNA_primase_S


cpi:Cpin_0998 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

geo:Geob_0336 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ruf:TH63_03090 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

fjo:Fjoh_3303 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

fjg:BB050_02761 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:Alpha_TIF pf:LigD_Prim-Pol pf:DNA_primase_S pf:DUF4817

flu:CHH17_05575 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

fla:SY85_09220 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DUF5655 pf:LigD_Prim-Pol pf:DNA_primase_S

pcm:AY601_3223 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

cgn:OK18_00335 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

gbm:Gbem_0128 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

phe:Phep_1702 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

gem:GM21_0109 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

sphn:BV902_20470 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

pgs:CPT03_07335 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S pf:GH3

puv:PUV_10690 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

fba:FIC_00895 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

nko:Niako_1577 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

scn:Solca_1673 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

psty:BFS30_17235 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

geb:GM18_0111 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

fpsz:AMR72_15345 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_C pf:LigD_Prim-Pol pf:DNA_primase_S

fln:FLA_6428 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

mup:A0256_05625 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

shg:Sph21_2578 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Ripply pf:LigD_Prim-Pol pf:TGT_C1 pf:DNA_primase_S

cih:ATE47_01435 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

psn:Pedsa_1057 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pep:AQ505_21600 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

muc:MuYL_0888 pf:LigD_N pf:KAsynt_C_assoc pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S pf:GH3

dfe:Dfer_0365 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C pf:LigD_Prim-Pol pf:DNA_primase_S

sht:KO02_10895 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

chry:CEY12_12005 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

cpip:CJF12_16755 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

pnl:PNK_2195 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S pf:GH3

cio:CEQ15_15855 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:HD pf:LigD_Prim-Pol pf:DNA_primase_S

afw:Anae109_0939 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

tmc:LMI_2571 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

gba:J421_5987 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

lha:LHA_0995 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:UvrA_inter pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cbg:CbuG_0044 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cbu:CBU_1934 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cbc:CbuK_0042 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cbs:COXBURSA331_A2135 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

lok:Loa_02538 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:UvrA_inter pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

fgi:OP10G_3151 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

moc:BB934_16235 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

taa:NMY3_00137 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

dor:Desor_2615 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mcg:GL4_0154 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C pf:LigD_Prim-Pol pf:DNA_primase_S

aex:Astex_1372 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:Caerin_1 pf:DNA_primase_S

hoh:Hoch_3330 pf:LigD_N pf:DNA_ligase_A_M pf:GPAT_C pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pht:BLM14_01395 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

oah:DR92_3927 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

oan:Oant_4315 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mei:Msip34_2574 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF4985 pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

hrb:Hrubri_2562 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:MAGE_N pf:LigD_Prim-Pol pf:DNA_primase_S

ccel:CCDG5_0620 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ddh:Desde_0514 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

dmi:Desmer_2946 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cpy:Cphy_1729 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

age:AA314_02665 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

dai:Desaci_2451 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

msc:BN69_1443 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mlo:mll4606 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

hse:Hsero_2271 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

hsz:ACP92_11350 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mln:A9174_03965 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rhy:RD110_14845 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Planc_extracel pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

dts:BI380_23280 pf:Exo_endo_phos pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mbd:MEBOL_004870 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ata:AWN88_02590 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pla:Plav_2977 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mesw:A9K65_004035 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rhz:RHPLAN_34800 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

tsa:AciPR4_1657 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

agr:AGROH133_09757 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

sfd:USDA257_c52060 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

sur:STAUR_6997 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

sino:SS05631_b61200 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mci:Mesci_0783 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mop:Mesop_0815 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

odi:ODI_R4157 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

atf:Ach5_43430 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

nlc:EBAPG3_007500 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

sgy:Sgly_0962 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cfus:CYFUS_001959 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pmy:Pmen_3217 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rbm:TEF_06740 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S