Search common motifs in selected sequences


  
Motifs : pf:2-Hacid_dhD-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
 pf:2-Hacid_dh_CD-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
 pf:3HCDH_N3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
 pf:ATP-graspATP-grasp domain
 pf:ATP-grasp_3ATP-grasp domain
 pf:ATP-grasp_4ATP-grasp domain
 pf:ATPgrasp_STSugar-transfer associated ATP-grasp
 pf:Acetyltransf_6Acetyltransferase (GNAT) domain
 pf:BRCTBRCA1 C Terminus (BRCT) domain
 pf:Bac_luciferaseLuciferase-like monooxygenase
 pf:CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domain
 pf:Cas3-like_C
 pf:CbiACobQ/CobB/MinD/ParA nucleotide binding domain
 pf:DELLATranscriptional regulator DELLA protein N terminal
 pf:DUF2000Protein of unknown function (DUF2000)
 pf:DUF4441Domain of unknown function (DUF4441)
 pf:DUF4494Domain of unknown function (DUF4494)
 pf:DUF4661Domain of unknown function (DUF4661)
 pf:Dala_Dala_lig_CD-ala D-ala ligase C-terminus
 pf:Dala_Dala_lig_ND-ala D-ala ligase N-terminus
 pf:F420_oxidoredNADP oxidoreductase coenzyme F420-dependent
 pf:FakA-like_C
 pf:GARS_APhosphoribosylglycinamide synthetase, ATP-grasp (A) domain
 pf:GGDEF_2
 pf:Glyco_trans_4_5Glycosyl-transferase family 4
 pf:Glyco_transf_90Glycosyl transferase family 90
 pf:ILEIInterleukin-like EMT inducer
 pf:KinesinKinesin motor domain
 pf:LpxKTetraacyldisaccharide-1-P 4'-kinase
 pf:MAS20MAS20 protein import receptor
 pf:MctBCopper transport outer membrane protein, MctB
 pf:Meth_synt_2Cobalamin-independent synthase, Catalytic domain
 pf:MurD-like_N
 pf:Mur_ligaseMur ligase family, catalytic domain
 pf:Mur_ligase_CMur ligase family, glutamate ligase domain
 pf:Mur_ligase_MMur ligase middle domain
 pf:NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenase
 pf:PDDEXK_10PD-(D/E)XK nuclease superfamily
 pf:PGA_capBacterial capsule synthesis protein PGA_cap
 pf:PHO4Phosphate transporter family
 pf:Peptidase_C11Clostripain family
 pf:Peripla_BP_4Periplasmic binding protein domain
 pf:Phage_TAC_7Phage tail assembly chaperone proteins, E, or 41 or 14
 pf:RNase_TExonuclease
 pf:RimKRimK-like ATP-grasp domain
 pf:TTLTubulin-tyrosine ligase family
 pf:Terpene_synth_CTerpene synthase family, metal binding domain
 pf:UPF0180Uncharacterised protein family (UPF0180)

dca:Desca_2341 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

dru:Desru_3346 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

dfg:B0537_03800 pf:Mur_ligase pf:MurD-like_N pf:BRCT pf:Mur_ligase_M pf:Kinesin pf:Mur_ligase_C

drm:Dred_0676 pf:Mur_ligase pf:MurD-like_N pf:BRCT pf:Meth_synt_2 pf:Mur_ligase_M pf:Mur_ligase_C

pth:PTH_1860 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C pf:FakA-like_C

dku:Desku_1156 pf:Mur_ligase pf:MurD-like_N pf:DUF4661 pf:Mur_ligase_M pf:Glyco_transf_90 pf:Mur_ligase_C

dae:Dtox_1056 pf:MurD-like_N pf:Mur_ligase pf:F420_oxidored pf:Mur_ligase_M pf:ILEI pf:Mur_ligase_C

dgi:Desgi_3656 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:RNase_T pf:Mur_ligase_C

tfr:BR63_02340 pf:Mur_ligase pf:MurD-like_N pf:3HCDH_N pf:DELLA pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

tjr:TherJR_2159 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

dau:Daud_1435 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gek:kuro4_14640 pf:Mur_ligase pf:MurD-like_N pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

sgbi:P3F81_05070 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:ILEI pf:Mur_ligase_C

aft:BBF96_06265 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

fwa:DCMF_09940 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

mana:MAMMFC1_03972 pf:Mur_ligase pf:MurD-like_N pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

gbz:JZM60_07745 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

adg:Adeg_1563 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:LpxK pf:Mur_ligase_C

hmo:HM1_2060 pf:Mur_ligase pf:NAD_binding_2 pf:MurD-like_N pf:Mur_ligase_M pf:RNase_T pf:Mur_ligase_C

pft:JBW_02027 pf:MurD-like_N pf:Mur_ligase pf:F420_oxidored pf:Mur_ligase_M pf:Mur_ligase_C

pca:Pcar_2201 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C pf:Phage_TAC_7

gsk:KN400_3007 pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

gsu:GSU3068 pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

gme:Gmet_0413 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

bacg:D2962_06730 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gpi:GPICK_02365 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gef:FO488_01605 pf:Mur_ligase pf:F420_oxidored pf:2-Hacid_dh_C pf:MurD-like_N pf:PDDEXK_10 pf:Mur_ligase_M pf:Mur_ligase_C

ppd:Ppro_3288 pf:Mur_ligase pf:2-Hacid_dh_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

kme:H0A61_02118 pf:Mur_ligase pf:MurD-like_N pf:F420_oxidored pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

sat:SYN_01747 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

geo:Geob_0781 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:DELLA pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

puf:UFO1_2514 pf:MurD-like_N pf:Mur_ligase pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

toc:Toce_0953 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

pace:A6070_04290 pf:2-Hacid_dh_C pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

tamm:GEAMG1_2415 pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

geb:GM18_3886 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:MctB pf:DELLA pf:Mur_ligase_M pf:Mur_ligase_C

ssg:Selsp_1819 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

deu:DBW_2799 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:3HCDH_N pf:Mur_ligase_M pf:Mur_ligase_C pf:Acetyltransf_6

gnt:KP003_01325 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:MctB pf:DELLA pf:Mur_ligase_M pf:Mur_ligase_C

gur:Gura_3973 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:DELLA pf:Mur_ligase_M pf:Mur_ligase_C

mfun:GXM21_04290 pf:Mur_ligase pf:MurD-like_N pf:NAD_binding_2 pf:Mur_ligase_M pf:Terpene_synth_C pf:DUF4441 pf:Mur_ligase_C

gbn:GEOBRER4_04900 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:DELLA pf:Mur_ligase_M pf:Mur_ligase_C

ger:KP004_01670 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:MctB pf:DELLA pf:Mur_ligase_M pf:Mur_ligase_C

gsub:KP001_13810 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:MctB pf:DELLA pf:Mur_ligase_M pf:Mur_ligase_C

gbm:Gbem_0492 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:DELLA pf:Mur_ligase_M pf:Mur_ligase_C

glo:Glov_0669 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gpl:M1B72_19275 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:MctB pf:DELLA pf:Mur_ligase_M pf:Mur_ligase_C

mta:Moth_0844 pf:Mur_ligase pf:NAD_binding_2 pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

mtho:MOTHE_c07900 pf:Mur_ligase pf:NAD_binding_2 pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

mthz:MOTHA_c08840 pf:Mur_ligase pf:NAD_binding_2 pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

pmw:B2K_30815 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:2-Hacid_dh_C pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C pf:MAS20

pef:A7E78_14185 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

hcv:FTV88_1756 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

dve:DESUT3_10320 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

pmq:PM3016_6068 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:2-Hacid_dh_C pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C pf:MAS20

pms:KNP414_06455 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:2-Hacid_dh_C pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C pf:MAS20

mox:DAMO_2296 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:Mur_ligase_M pf:CbiA pf:Mur_ligase_C

aaco:K1I37_12515 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

afx:JZ786_15415 pf:Mur_ligase pf:MurD-like_N pf:UPF0180 pf:2-Hacid_dh pf:Mur_ligase_M pf:Mur_ligase_C

gem:GM21_0509 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:DELLA pf:Mur_ligase_M pf:Mur_ligase_C

dep:AOP6_2311 pf:Mur_ligase pf:2-Hacid_dh_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gsb:GSUB_12985 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

paun:MJA45_08040 pf:Mur_ligase pf:Glyco_trans_4_5 pf:PGA_cap pf:Mur_ligase_M pf:Mur_ligase_C pf:GGDEF_2

sted:SPTER_17090 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

des:DSOUD_2923 pf:Mur_ligase pf:F420_oxidored pf:Mur_ligase_M pf:Mur_ligase_C

pchi:PC41400_24465 pf:Mur_ligase pf:MurD-like_N pf:UPF0180 pf:Mur_ligase_M pf:Mur_ligase_C

acur:JZ785_05295 pf:Mur_ligase pf:MurD-like_N pf:2-Hacid_dh pf:Mur_ligase_M pf:Mur_ligase_C

selt:BCS37_02845 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C pf:Dala_Dala_lig_N pf:Dala_Dala_lig_N pf:RimK pf:ATP-grasp_3 pf:GARS_A pf:Dala_Dala_lig_C pf:ATP-grasp pf:CPSase_L_D2 pf:ATP-grasp_4 pf:ATPgrasp_ST

aac:Aaci_1829 pf:Mur_ligase pf:MurD-like_N pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

dbk:DGMP_07050 pf:Mur_ligase pf:MurD-like_N pf:F420_oxidored pf:3HCDH_N pf:DELLA pf:Mur_ligase_M pf:Mur_ligase_C

tae:TepiRe1_1242 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

tep:TepRe1_1141 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

aar:Acear_0747 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

ppsc:EHS13_11065 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

sdia:QU667_03875 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C pf:Dala_Dala_lig_N pf:Dala_Dala_lig_N pf:RimK pf:ATP-grasp_3 pf:GARS_A pf:Dala_Dala_lig_C pf:ATP-grasp pf:CPSase_L_D2 pf:ATP-grasp_4 pf:ATPgrasp_ST pf:TTL

afn:Acfer_1301 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

aad:TC41_1925 pf:Mur_ligase pf:2-Hacid_dh_C pf:MurD-like_N pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

dek:DSLASN_00930 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

slp:Slip_0796 pf:Mur_ligase pf:MurD-like_N pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

plv:ERIC2_c28360 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

pyg:AWM70_13620 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C pf:DUF4494

meg:DKB62_02475 pf:Mur_ligase pf:F420_oxidored pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

chy:CHY_2068 pf:Mur_ligase pf:MurD-like_N pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

selo:AXE86_02750 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C pf:Dala_Dala_lig_N pf:Dala_Dala_lig_N pf:RimK pf:ATP-grasp_3 pf:GARS_A pf:CPSase_L_D2 pf:Dala_Dala_lig_C pf:ATP-grasp pf:ATP-grasp_4 pf:TTL pf:ATPgrasp_ST

acp:A2cp1_3912 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

adau:NZD86_10990 pf:Mur_ligase pf:MurD-like_N pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

ade:Adeh_3772 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

ank:AnaeK_3828 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

dds:Ddes_1114 pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C pf:Bac_luciferase

msil:METEAL_09810 pf:Mur_ligase pf:MurD-like_N pf:DELLA pf:Mur_ligase_M pf:Mur_ligase_C

pbj:VN24_17700 pf:Mur_ligase pf:NAD_binding_2 pf:BRCT pf:Peripla_BP_4 pf:Mur_ligase_M pf:PHO4 pf:Mur_ligase_C

plut:EI981_23125 pf:Mur_ligase pf:MurD-like_N pf:BRCT pf:Mur_ligase_M pf:Mur_ligase_C

palr:HGI30_16140 pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

pjd:Pjdr2_4427 pf:Mur_ligase pf:MctB pf:Mur_ligase_M pf:Mur_ligase_C

ain:Acin_1526 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Peptidase_C11 pf:Mur_ligase_C

afas:NZD89_13190 pf:Mur_ligase pf:BRCT pf:Mur_ligase_M pf:DUF2000 pf:Mur_ligase_C

ccx:COCOR_06094 pf:Mur_ligase pf:F420_oxidored pf:3HCDH_N pf:MurD-like_N pf:Mur_ligase_M pf:Cas3-like_C pf:Mur_ligase_C

pfac:PFJ30894_02054 pf:Mur_ligase pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

pib:BBD41_07270 pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C pf:DUF4494

dal:Dalk_3130 pf:Mur_ligase pf:F420_oxidored pf:3HCDH_N pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

def:CNY67_06715 pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C pf:Bac_luciferase