Search common motifs in selected sequences


  
Motifs : pf:Big_4Bacterial Ig-like domain (group 4)
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_C
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DNA_primase_SDNA primase small subunit
 pf:DUF1999Protein of unknown function (DUF1999)
 pf:DUF6052
 pf:DUF6643
 pf:GAAD
 pf:GH3GH3 auxin-responsive promoter
 pf:GlypicanGlypican
 pf:LigD_NDNA polymerase Ligase (LigD)
 pf:LigD_Prim-Pol
 pf:MucinMucin-like glycoprotein
 pf:NRIP1_repr_1Nuclear receptor-interacting protein 1 repression 1
 pf:PI_PP_I
 pf:RNA_ligaseRNA ligase
 pf:Read-throughRead-through domain
 pf:RecombinaseRecombinase
 pf:RipplyTranscription Regulator
 pf:Stealth_CR3Stealth protein CR3, conserved region 3
 pf:TGT_C1C1 domain of tRNA-guanine transglycosylase dimerisation
 pf:Thr_synth_NThreonine synthase N terminus
 pf:Top1B_N_bact
 pf:TropomodulinTropomodulin
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

dru:Desru_1852 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

dca:Desca_1165 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

drm:Dred_2002 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

dku:Desku_0983 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mta:Moth_1488 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:DNA_ligase_C

pth:PTH_1243 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

dgi:Desgi_1818 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

tbi:Tbis_2338 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

puf:UFO1_2618 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:GAAD pf:DNA_ligase_A_C pf:DNA_ligase_OB_2


ave:Arcve_0209 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_C pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

fal:FRAAL4382 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sesp:BN6_42910 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

afg:AFULGI_00019760 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_C pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

cfi:Celf_0800 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

tmr:Tmar_1128 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_C

svi:Svir_34920 pf:LigD_N pf:Recombinase pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ast:Asulf_01568 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

chu:CHU_2837 pf:LigD_N pf:Tropomodulin pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:Glypican pf:Mucin pf:LigD_Prim-Pol pf:DNA_primase_S

gfo:GFO_0300 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:GH3

pft:JBW_01943 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

tid:Thein_1426 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mph:MLP_04810 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

gob:Gobs_2120 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cai:Caci_5248 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF6643 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

bsd:BLASA_3098 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ams:AMIS_3570 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

fri:FraEuI1c_4744 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

dfe:Dfer_0365 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C pf:LigD_Prim-Pol pf:DNA_primase_S

alu:BB31_21455 pf:DNA_ligase_A_M pf:RNA_ligase pf:Top1B_N_bact pf:DNA_ligase_A_C

zpr:ZPR_3654 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

aau:AAur_0283 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

tcu:Tcur_1208 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

tit:Thit_1868 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

tmt:Tmath_1843 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

twi:Thewi_2144 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

nko:Niako_4922 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol

phe:Phep_1702 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

afw:Anae109_0939 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

dti:Desti_0132 pf:LigD_N pf:NRIP1_repr_1 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

tbo:Thebr_0487 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:PI_PP_I pf:DNA_ligase_A_C

tpd:Teth39_0475 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:PI_PP_I pf:DNA_ligase_A_C

geb:GM18_0111 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

tex:Teth514_0952 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:PI_PP_I pf:DNA_ligase_A_C

thx:Thet_1965 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:PI_PP_I pf:DNA_ligase_A_C

tki:TKV_c19040 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

csh:Closa_3638 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

fba:FIC_00895 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

kfl:Kfla_4705 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

arr:ARUE_c02810 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mmar:MODMU_2075 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mil:ML5_0458 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

msa:Mycsm_05316 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Stealth_CR3 pf:Big_4 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Thr_synth_N pf:DNA_ligase_A_C

shg:Sph21_2578 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Ripply pf:LigD_Prim-Pol pf:TGT_C1 pf:DNA_primase_S

mcj:MCON_3253 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

aja:AJAP_30105 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Read-through

mau:Micau_0484 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

mne:D174_22685 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Big_4 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

arm:ART_3548 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mts:MTES_3162 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

maf:MAF_09470 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbb:BCG_0992 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbk:K60_010050 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbm:BCGMEX_0963 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C


mbt:JTY_0962 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbx:BCGT_0751 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbz:LH58_05110 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mra:MRA_0946 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtb:TBMG_03051 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtc:MT0965 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtd:UDA_0938 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mte:CCDC5079_0867 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtj:J112_05060 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtk:TBSG_03071 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtl:CCDC5180_0858 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtn:ERDMAN_1039 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mto:MTCTRI2_0962 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtq:HKBS1_0986 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtu:Rv0938 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtub:MT7199_0957 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtuc:J113_06570 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtul:TBHG_00923 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtur:CFBS_0986 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtut:HKBT1_0986 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtuu:HKBT2_0987 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtv:RVBD_0938 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtx:M943_04915 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtz:TBXG_003031 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C


mce:MCAN_09381 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mcq:BN44_11030 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mcx:BN42_20748 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mcz:BN45_20239 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

actn:L083_1682 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

aoi:AORI_1870 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Read-through

cpi:Cpin_6404 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:GH3

cwo:Cwoe_4716 pf:LigD_N pf:DUF1999 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

mtf:TBFG_10956 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mcv:BN43_20408 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

msb:LJ00_27545 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF6052 pf:Thr_synth_N pf:DNA_ligase_A_C