Search common motifs in selected sequences


  
Motifs : pf:2_5_RNA_ligase22'-5' RNA ligase superfamily
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_A_NDNA ligase N terminus
 pf:DUF1846Domain of unknown function (DUF1846)
 pf:DUF2332Uncharacterized protein conserved in bacteria (DUF2332)
 pf:DUF2399Protein of unknown function C-terminus (DUF2399)
 pf:DUF4262Domain of unknown function (DUF4262)
 pf:DUF746Domain of Unknown Function (DUF746)
 pf:DimerisationDimerisation domain
 pf:IcmF_CType VI secretion protein IcmF C-terminal
 pf:PXPX domain
 pf:RNA_ligaseRNA ligase
 pf:SnoaL_4SnoaL-like domain
 pf:VMAP-M19
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

eli:ELI_13165 pf:DNA_ligase_A_N pf:DUF746 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

egn:BMF35_a0712 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

aep:AMC99_02576 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

anh:A6F65_00396 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cij:WG74_02845 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

ado:A6F68_00448 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

amx:AM2010_2214 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ery:CP97_02255 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

aay:WYH_02326 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cna:AB433_16495 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

nre:BES08_13800 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

pns:A9D12_04360 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

porl:BG023_11458 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

elq:Ga0102493_11971 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

nar:Saro_0068 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

sphk:SKP52_16435 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sphm:G432_05335 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

smag:AN936_16120 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

smaz:LH19_02065 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

sphp:LH20_15425 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ster:AOA14_04065 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

skr:BRX40_17310 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sgi:SGRAN_1120 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sal:Sala_0290 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

ssan:NX02_23555 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

stax:MC45_07985 pf:DNA_ligase_A_N pf:DUF2399 pf:DNA_ligase_A_M pf:DUF1846 pf:DNA_ligase_A_C

span:AWL63_02625 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sphg:AZE99_14415 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

smy:BJP26_05135 pf:DNA_ligase_A_N pf:DUF2399 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sphi:TS85_01875 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

syb:TZ53_19125 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

snj:A7E77_09225 pf:DNA_ligase_A_N pf:DUF2399 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

splm:BXU08_15640 pf:DNA_ligase_A_N pf:Dimerisation pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sjp:SJA_C1-17220 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sphr:BSY17_223 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

blas:BSY18_990 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sphb:EP837_00153 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:SnoaL_4 pf:DNA_ligase_A_C

sinb:SIDU_05735 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

swi:Swit_3979 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

sch:Sphch_0779 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

spmi:K663_07850 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rce:RC1_0647 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

abf:AMK58_08375 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

abq:ABAZ39_05835 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

abs:AZOBR_140226 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ali:AZOLI_0133 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

hne:HNE_1670 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

azl:AZL_003120 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ahu:A6A40_00500 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mes:Meso_0032 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pbr:PB2503_01927 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rbm:TEF_01285 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ati:AL072_02840 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ccr:CC_3610 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ccs:CCNA_03725 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rgi:RGI145_13215 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mamo:A6B35_07315 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rhz:RHPLAN_64340 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sno:Snov_0068 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

fil:BN1229_v1_0127 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

fiy:BN1229_v1_0130 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

meso:BSQ44_20695 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mop:Mesop_0077 pf:DNA_ligase_A_N pf:DUF4262 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

psin:CAK95_05645 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

bvv:BHK69_25725 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:PX pf:DNA_ligase_A_C

mln:A9174_00375 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mci:Mesci_0075 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mlo:mll5481 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

aak:AA2016_5337 pf:DNA_ligase_A_N pf:IcmF_C pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mam:Mesau_00078 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

lap:ACP90_21565 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

gbs:GbCGDNIH4_0904 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:2_5_RNA_ligase2 pf:DNA_ligase_A_C

bos:BSY19_1319 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

maqu:Maq22A_c03515 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

lagg:B0E33_05110 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

gbc:GbCGDNIH3_0904 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

gbe:GbCGDNIH1_0904 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:2_5_RNA_ligase2 pf:DNA_ligase_A_C

gbh:GbCGDNIH2_0904 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:2_5_RNA_ligase2 pf:DNA_ligase_A_C

rga:RGR602_CH01084 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rtr:RTCIAT899_CH05080 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

thw:BMG03_11265 pf:DNA_ligase_A_N pf:VMAP-M19 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

chel:AL346_05795 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

brc:BCCGELA001_33925 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

hni:W911_10710 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

met:M446_0628 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

aua:M673_09030 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DUF2332 pf:DNA_ligase_A_C

cdq:BOQ54_15890 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cse:Cseg_4093 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

bop:AXW83_25820 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:PX pf:DNA_ligase_A_C

tmo:TMO_2065 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rei:IE4771_CH01233 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rlg:Rleg_0915 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rel:REMIM1_CH01168 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mno:Mnod_1541 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rlu:RLEG12_15355 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rlb:RLEG3_15010 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ret:RHE_CH01164 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rle:RL1294 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rpha:AMC79_CH01207 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rec:RHECIAT_CH0001250 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rep:IE4803_CH01191 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C