Search common motifs in selected sequences


  
Motifs : pf:AAA_14AAA domain
 pf:AAA_16AAA ATPase domain
 pf:AAA_22AAA domain
 pf:ATPase_2ATPase domain predominantly from Archaea
 pf:Acyl-CoA_ox_NAcyl-coenzyme A oxidase N-terminal
 pf:Aminotran_3Aminotransferase class-III
 pf:ArmArmadillo/beta-catenin-like repeat
 pf:BATSBiotin and Thiamin Synthesis associated domain
 pf:BORCS6
 pf:BTBBTB/POZ domain
 pf:Beta-lactamaseBeta-lactamase
 pf:Beta-lactamase2Beta-lactamase enzyme family
 pf:Beta_elim_lyaseBeta-eliminating lyase
 pf:Binary_toxB_3
 pf:CBM-likePolysaccharide lyase family 4, domain III
 pf:CFSR
 pf:CNOT1_HEAT_NCCR4-NOT transcription complex subunit 1 HEAT repeat
 pf:COLFIFibrillar collagen C-terminal domain
 pf:CTNNBLCatenin-beta-like, Arm-motif containing nuclear
 pf:Calx-betaCalx-beta domain
 pf:Cas_Cas4Domain of unknown function DUF83
 pf:ClathrinRegion in Clathrin and VPS
 pf:DNAPKcs_CC1-2
 pf:DNA_pol_B_3DNA polymerase family B viral insert
 pf:DSPcDual specificity phosphatase, catalytic domain
 pf:DUF1151Protein of unknown function (DUF1151)
 pf:DUF3298Protein of unknown function (DUF3298)
 pf:DUF3922Protein of unknown function (DUF3992)
 pf:DUF4322Domain of unknown function (DUF4322)
 pf:DUF4371Domain of unknown function (DUF4371)
 pf:DUF5122Domain of unknown function (DUF5122) beta-propeller
 pf:DUF6119
 pf:DUF6179
 pf:DUF6556
 pf:DUF6817
 pf:DUF6873
 pf:Dcc1
 pf:EF1GElongation factor 1 gamma, conserved domain
 pf:Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domain
 pf:FlavokinaseRiboflavin kinase
 pf:FtsXFtsX-like permease family
 pf:GARIL_Rab2_bd
 pf:GGDEF_2
 pf:GIY-YIGGIY-YIG catalytic domain
 pf:Gcw_chpBacterial protein of unknown function (Gcw_chp)
 pf:Gemini_AL1_MGeminivirus rep protein central domain
 pf:GlucosaminidaseMannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
 pf:HDHD domain
 pf:HD_4HD domain
 pf:HTH_18Helix-turn-helix domain
 pf:HTH_19Helix-turn-helix domain
 pf:HTH_22HTH domain
 pf:HTH_7Helix-turn-helix domain of resolvase
 pf:HTH_AraCBacterial regulatory helix-turn-helix proteins, AraC family
 pf:HTH_Tnp_1_2Helix-turn-helix of insertion element transposase
 pf:HTH_Tnp_4Helix-turn-helix of DDE superfamily endonuclease
 pf:Init_tRNA_PTRit1 DUSP-like domain
 pf:LPAM_1Prokaryotic membrane lipoprotein lipid attachment site
 pf:Lipin_midLipin/Ned1/Smp2 multi-domain protein middle domain
 pf:LysC-type lysozyme/alpha-lactalbumin family
 pf:MacoilinTransmembrane protein
 pf:Med2Mediator complex subunit 2
 pf:Methyltransf_11Methyltransferase domain
 pf:Methyltransf_12Methyltransferase domain
 pf:Methyltransf_23Methyltransferase domain
 pf:Methyltransf_25Methyltransferase domain
 pf:Methyltransf_31Methyltransferase domain
 pf:NACHTNACHT domain
 pf:NB-ARCNB-ARC domain
 pf:Na_Ca_exSodium/calcium exchanger protein
 pf:Na_Ca_ex_CC-terminal extension of sodium/calcium exchanger domain
 pf:Nore1-SARAHNovel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
 pf:Not1CCR4-Not complex component, Not1
 pf:PBP5_CPenicillin-binding protein 5, C-terminal domain
 pf:PDDEXK_1PD-(D/E)XK nuclease superfamily
 pf:PEP-utilizersPEP-utilising enzyme, mobile domain
 pf:PEPcasePhosphoenolpyruvate carboxylase
 pf:PEPcase_2Phosphoenolpyruvate carboxylase
 pf:PPDK_NPyruvate phosphate dikinase, PEP/pyruvate binding domain
 pf:PPL4
 pf:PTPlike_phytaseInositol hexakisphosphate
 pf:PTS_EIIA_2Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
 pf:PdaC
 pf:Peptidase_S11D-alanyl-D-alanine carboxypeptidase
 pf:Phage_lysozyme2
 pf:Proteasom_PSMBProteasome non-ATPase 26S subunit
 pf:RSTRCD1-SRO-TAF4 (RST) plant domain
 pf:RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)
 pf:Radical_SAMRadical SAM superfamily
 pf:RelA_SpoTRegion found in RelA / SpoT proteins
 pf:Reovirus_bridge
 pf:Response_regResponse regulator receiver domain
 pf:RloBRloB-like protein
 pf:RsgA_GTPase
 pf:Rx_N
 pf:SIL1Nucleotide exchange factor SIL1
 pf:SLTTransglycosylase SLT domain
 pf:SLT_3
 pf:TED_complement
 pf:TRA-1_regulatedTRA-1 regulated protein R03H10.4
 pf:Terminase_5Putative ATPase subunit of terminase (gpP-like)
 pf:TetR_C_10Tetracycline repressor, C-terminal all-alpha domain
 pf:TetR_NBacterial regulatory proteins, tetR family
 pf:ThiSThiS family
 pf:UDPG_MGDP_dhUDP-glucose/GDP-mannose dehydrogenase family, central domain
 pf:UTRAUTRA domain
 pf:Ubie_methyltranubiE/COQ5 methyltransferase family
 pf:V-ATPase_H_CV-ATPase subunit H
 pf:V-ATPase_H_NV-ATPase subunit H
 pf:Vitellogenin_NLipoprotein amino terminal region
 pf:Vps16_CVps16, C-terminal region
 pf:Y_phosphataseProtein-tyrosine phosphatase
 pf:YabA
 pf:Zn-ribbon_8Zinc ribbon domain
 pf:nSTAND3
 pf:zf-C2H2Zinc finger, C2H2 type
 pf:zf-C2H2_11zinc-finger C2H2-type
 pf:zf-C2H2_4C2H2-type zinc finger
 pf:zf-C2H2_6C2H2-type zinc finger
 pf:zf-C2H2_jazZinc-finger double-stranded RNA-binding
 pf:zf-H2C2_2Zinc-finger double domain
 pf:zf-H2C2_5C2H2-type zinc-finger domain
 pf:zf-Sec23_Sec24Sec23/Sec24 zinc finger
 pf:zf-metZinc-finger of C2H2 type
 pf:zf_C2H2_ZHX
 pf:zf_UBZ

heq:HPF32_0502 pf:TED_complement pf:DUF4322 pf:SLT pf:Binary_toxB_3 pf:Na_Ca_ex_C

hpyu:K751_03235 pf:DUF4322 pf:SLT pf:Binary_toxB_3

hem:K748_07925 pf:DUF4322 pf:SLT pf:Binary_toxB_3

hpym:K749_01315 pf:DUF4322 pf:SLT pf:Binary_toxB_3

hpyr:K747_06675 pf:DUF4322 pf:SLT pf:Binary_toxB_3

hpx:HMPREF0462_0898 pf:DUF4322 pf:SLT pf:Binary_toxB_3

hex:HPF57_0553 pf:DUF4322 pf:SLT pf:Binary_toxB_3

hef:HPF16_0832 pf:DUF4322 pf:SLT pf:Binary_toxB_3

hpf:HPF30_0801 pf:DUF4322 pf:SLT pf:Na_Ca_ex_C

hpyc:HPOKI112_04450 pf:DUF4322 pf:SLT pf:Binary_toxB_3

hpyl:HPOK310_0806 pf:RloB pf:DUF4322 pf:SLT pf:Na_Ca_ex_C

hpd:KHP_0796 pf:RloB pf:DUF4322 pf:SLT pf:Na_Ca_ex_C

hpu:HPCU_02850 pf:DUF4322 pf:SLT

hey:MWE_1001 pf:RloB pf:DUF4322 pf:SLT pf:Binary_toxB_3 pf:Na_Ca_ex_C

hpo:HMPREF4655_21082 pf:RloB pf:DUF4322 pf:SLT pf:Binary_toxB_3 pf:Na_Ca_ex_C

hpyo:HPOK113_0544 pf:RloB pf:DUF4322 pf:SLT

hhp:HPSH112_04435 pf:TED_complement pf:DUF4322 pf:SLT

hpt:HPSAT_04165 pf:TED_complement pf:DUF4322 pf:SLT pf:Binary_toxB_3

hep:HPPN120_02535 pf:TED_complement pf:DUF4322 pf:SLT pf:Binary_toxB_3

hpv:HPV225_0518 pf:DUF4322 pf:SLT pf:Binary_toxB_3

hhq:HPSH169_02675 pf:TED_complement pf:DUF4322 pf:SLT pf:Binary_toxB_3

hhr:HPSH417_02490 pf:TED_complement pf:DUF4322 pf:SLT

hcn:HPB14_04050 pf:RloB pf:DUF4322 pf:SLT pf:Na_Ca_ex_C

heu:HPPN135_02560 pf:DUF4322 pf:SLT pf:Binary_toxB_3

hpc:HPPC_02570 pf:RloB pf:DUF4322 pf:SLT pf:Na_Ca_ex_C pf:Binary_toxB_3

hei:C730_02695 pf:RloB pf:SLT

heo:C694_02695 pf:RloB pf:SLT

her:C695_02695 pf:RloB pf:SLT

hpy:HP_0523 pf:RloB pf:SLT

hpyb:HPOKI102_04410 pf:DUF4322 pf:SLT pf:PPL4

hpyf:HPOKI422_04420 pf:DUF4322 pf:SLT pf:PPL4

hpyj:HPOKI898_04425 pf:DUF4322 pf:SLT pf:PPL4

hpg:HPG27_482 pf:RloB pf:DUF4322 pf:SLT

heb:U063_0831 pf:DUF4322 pf:SLT

hez:U064_0834 pf:DUF4322 pf:SLT

heg:HPGAM_02670 pf:DUF4322 pf:SLT

hpyi:K750_04165 pf:DUF4322 pf:SLT

hpi:hp908_0522 pf:RloB pf:DUF4322 pf:SLT

hpq:hp2017_0504 pf:RloB pf:DUF4322 pf:SLT

hpw:hp2018_0506 pf:RloB pf:DUF4322 pf:SLT

hpm:HPSJM_02670 pf:RloB pf:SLT pf:GARIL_Rab2_bd

hpp:HPP12_0530 pf:DUF4322 pf:SLT

hpe:HPELS_03950 pf:SLT pf:GARIL_Rab2_bd

hph:HPLT_02590 pf:DUF4322 pf:SLT

hen:HPSNT_02695 pf:TRA-1_regulated pf:SLT

hpj:jhp_0472 pf:DUF4322 pf:SLT

hca:HPPC18_02500 pf:DUF4322 pf:SLT

hpl:HPB8_722 pf:DUF4322 pf:SLT

hpz:HPKB_0819 pf:DUF4322 pf:SLT

hpa:HPAG1_0498 pf:DUF4322 pf:SLT

hps:HPSH_04310 pf:SLT pf:Binary_toxB_3

hpn:HPIN_04285 pf:SLT

vg:30310348 pf:SLT pf:DUF1151

apai:APAC_2467 pf:SLT pf:Glucosaminidase

sulg:FJR48_04615 pf:SLT pf:SLT_3

zro:ZYRO0C14388g pf:Ubie_methyltran pf:Methyltransf_23 pf:Methyltransf_31 pf:Methyltransf_25 pf:Methyltransf_12 pf:Methyltransf_11 pf:Methyltransf_11 pf:Ubie_methyltran

bfe:K6V30_20470 pf:Radical_SAM pf:BATS pf:Aminotran_3 pf:Beta_elim_lyase

aly:9322739 pf:Rx_N pf:RsgA_GTPase pf:AAA_16 pf:NB-ARC pf:ATPase_2 pf:nSTAND3 pf:AAA_22 pf:AAA_14 pf:NACHT pf:EF1G

ccha:ELD05_11025 pf:DNA_pol_B_3 pf:DUF3922

nsy:104242241 pf:HD_4 pf:DUF6817 pf:HD pf:RelA_SpoT pf:ThiS

nta:107761649 pf:HD_4 pf:DUF6817 pf:HD pf:RelA_SpoT pf:ThiS

panh:HU763_013165 pf:Gcw_chp

soc:105207574 pf:SIL1 pf:Arm pf:V-ATPase_H_C pf:PTS_EIIA_2 pf:BTB

coj:CORN_0388 pf:PDDEXK_1 pf:Cas_Cas4

csc:Csac_2518 pf:Response_reg pf:GGDEF_2 pf:Lipin_mid pf:HTH_AraC pf:HTH_18 pf:HTH_AraC

lav:104845455 pf:zf-C2H2 pf:zf-H2C2_2 pf:zf-C2H2_jaz pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-C2H2_6 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-C2H2_6 pf:zf_UBZ pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-C2H2_6 pf:zf-C2H2_11 pf:zf-H2C2_5 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-C2H2_jaz pf:Zn-ribbon_8 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-met pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-C2H2_6 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-C2H2_jaz pf:zf-met pf:Zn-ribbon_8 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-C2H2_6 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-C2H2_jaz pf:zf-C2H2_6 pf:zf-met pf:Zn-ribbon_8 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-C2H2_jaz pf:zf-met

mgen:117228520 pf:YabA

pdis:D8B20_20180 pf:DUF6119 pf:SLT pf:SLT_3 pf:Phage_lysozyme2 pf:Lys pf:RST

bod:118680291 pf:Gemini_AL1_M pf:UDPG_MGDP_dh


nau:109234028 pf:HD_4 pf:DUF6817 pf:HD pf:RelA_SpoT pf:ThiS

paus:NCTC13651_02093 pf:COLFI pf:Fibrinogen_C pf:DUF5122 pf:CBM-like pf:CBM-like

cel:CELE_C06G1.4 pf:DNAPKcs_CC1-2 pf:Not1

pdul:117615517 pf:UTRA pf:DSPc pf:DUF6873 pf:Init_tRNA_PT pf:Y_phosphatase pf:PTPlike_phytase

pju:L1P09_13760 pf:Gcw_chp

pmae:LMZ02_27225 pf:FtsX pf:DUF6556 pf:FtsX

win:WPG_2373 pf:CNOT1_HEAT_N

amt:Amet_1525 pf:PPDK_N pf:Acyl-CoA_ox_N pf:PEP-utilizers

bcy:Bcer98_1193 pf:Peptidase_S11 pf:Beta-lactamase2 pf:PBP5_C

bpit:BPIT_18540 pf:PEPcase_2 pf:PEPcase

bth:BT_1442 pf:Radical_SAM pf:BATS pf:Aminotran_3 pf:Beta_elim_lyase

btho:Btheta7330_01773 pf:Radical_SAM pf:BATS pf:Aminotran_3 pf:Beta_elim_lyase

clq:UPTC4110_0377 pf:PDDEXK_1 pf:Cas_Cas4

fcu:NOX80_04130 pf:LPAM_1 pf:PdaC pf:DUF3298


pasa:BAOM_3577 pf:Peptidase_S11 pf:Beta-lactamase2 pf:Beta-lactamase pf:PBP5_C

pix:RIN61_00315 pf:Gcw_chp

pki:111833395 pf:Na_Ca_ex pf:CFSR pf:Na_Ca_ex_C pf:Calx-beta pf:Calx-beta pf:Na_Ca_ex

ppy:PPE_04108 pf:FtsX pf:DUF6556 pf:FtsX

prel:PRELSG_1111500 pf:Nore1-SARAH pf:Flavokinase

cqi:110718057 pf:DUF4371 pf:Reovirus_bridge

iel:124164990 pf:Vitellogenin_N

nto:104091367 pf:HD_4 pf:DUF6817 pf:HD pf:Med2 pf:RelA_SpoT pf:ThiS

sgre:126273185 pf:Proteasom_PSMB pf:V-ATPase_H_N pf:Arm pf:Arm pf:CTNNBL pf:DUF6179 pf:BTB

tda:119667819 pf:zf_C2H2_ZHX pf:zf-C2H2 pf:zf-C2H2_jaz pf:zf_C2H2_ZHX pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-Sec23_Sec24 pf:zf-H2C2_2 pf:zf-C2H2_4 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-H2C2_2 pf:zf-C2H2_4


amil:114975698 pf:BORCS6 pf:Macoilin pf:Vps16_C pf:Clathrin pf:Vps16_C pf:Dcc1

beg:INE88_04144 pf:Radical_SAM pf:BATS pf:Aminotran_3 pf:Beta_elim_lyase

cbi:CLJ_B1942 pf:TetR_N pf:Terminase_5 pf:HTH_Tnp_1_2 pf:HTH_19 pf:HTH_Tnp_4 pf:HTH_22 pf:HTH_7 pf:TetR_C_10

cby:CLM_1921 pf:TetR_N pf:Terminase_5 pf:HTH_Tnp_1_2 pf:HTH_19 pf:HTH_Tnp_4 pf:HTH_22 pf:HTH_7 pf:TetR_C_10

cfo:112639614 pf:RVT_1 pf:GIY-YIG