Search common motifs in selected sequences


  
Motifs : pf:2-Hacid_dh_CD-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
 pf:60KD_IMP60Kd inner membrane protein
 pf:ACR_tranAcrB/AcrD/AcrF family
 pf:ADH_zinc_NZinc-binding dehydrogenase
 pf:AlaDh_PNT_CAlanine dehydrogenase/PNT, C-terminal domain
 pf:AsmA_2AsmA-like C-terminal region
 pf:Biotin_lipoylBiotin-requiring enzyme
 pf:Biotin_lipoyl_2Biotin-lipoyl like
 pf:Bys1Blastomyces yeast-phase-specific protein
 pf:C1qC1q domain
 pf:CSD2
 pf:Cation_effluxCation efflux family
 pf:Colicin_VColicin V production protein
 pf:CollagenCollagen triple helix repeat (20 copies)
 pf:Cu2_monoox_CCopper type II ascorbate-dependent monooxygenase, C-terminal domain
 pf:CusB_dom_1
 pf:CwsACell wall synthesis protein CwsA
 pf:DUF1409Protein of unknown function (DUF1409)
 pf:DUF2062Uncharacterized protein conserved in bacteria (DUF2062)
 pf:DUF2140Uncharacterized protein conserved in bacteria (DUF2140)
 pf:DUF2633Protein of unknown function (DUF2633)
 pf:DUF2999Protein of unknown function (DUF2999)
 pf:DUF3071Protein of unknown function (DUF3071)
 pf:DUF3458Domain of unknown function (DUF3458)
 pf:DUF374Domain of unknown function (DUF374)
 pf:DUF4457Domain of unknown function (DUF4457)
 pf:DUF4834Domain of unknown function (DUF4834)
 pf:DUF6377
 pf:DUF956Domain of unknown function (DUF956)
 pf:DamDNA N-6-adenine-methyltransferase (Dam)
 pf:EALEAL domain
 pf:EpimeraseNAD dependent epimerase/dehydratase family
 pf:FAM70FAM70 protein
 pf:Fe_bilin_redFerredoxin-dependent bilin reductase
 pf:Flg_bb_rodFlagella basal body rod protein
 pf:Form-deh_transFormate dehydrogenase N, transmembrane
 pf:FtsXFtsX-like permease family
 pf:GDP_Man_DehydGDP-mannose 4,6 dehydratase
 pf:GGDEFDiguanylate cyclase, GGDEF domain
 pf:GGDEF_2
 pf:GRAMGRAM domain
 pf:GtrAGtrA-like protein
 pf:HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:HATPase_c_3Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:HPTransfaseHistidine phosphotransferase
 pf:HTH_18Helix-turn-helix domain
 pf:HTH_AraCBacterial regulatory helix-turn-helix proteins, AraC family
 pf:HisKAHis Kinase A (phospho-acceptor) domain
 pf:HlyD_3HlyD family secretion protein
 pf:HlyD_D23Barrel-sandwich domain of CusB or HlyD membrane-fusion
 pf:HupE_UreJ_2HupE / UreJ protein
 pf:InhA-like_MAM
 pf:KRKR domain
 pf:LAT2Linker for activation of T-cells family member 2
 pf:Lactamase_B_2Beta-lactamase superfamily domain
 pf:Lactamase_B_3Beta-lactamase superfamily domain
 pf:LppALipoprotein confined to pathogenic Mycobacterium
 pf:LysELysE type translocator
 pf:LysMLysM domain
 pf:MFS_1Major Facilitator Superfamily
 pf:MLTD_NMltD lipid attachment motif
 pf:MMM1Maintenance of mitochondrial morphology protein 1
 pf:MMPLMMPL family
 pf:MacB_PCDMacB-like periplasmic core domain
 pf:NAD_binding_10NAD(P)H-binding
 pf:OapAOpacity-associated protein A LysM-like domain
 pf:PAP_PilOPilin accessory protein (PilO)
 pf:PASPAS fold
 pf:PAS_3PAS fold
 pf:PAS_4PAS fold
 pf:PAS_8PAS domain
 pf:PAS_9PAS domain
 pf:PBP_NPenicillin-binding protein N-terminus
 pf:PD-C2-AF1POU domain, class 2, associating factor 1
 pf:PDR_CDRCDR ABC transporter
 pf:PNP_UDP_1Phosphorylase superfamily
 pf:PatchedPatched family
 pf:Phage_GPLPhage head completion protein (GPL)
 pf:Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductase
 pf:Response_regResponse regulator receiver domain
 pf:Response_reg_2
 pf:Rieske
 pf:RmlD_sub_bindRmlD substrate binding domain
 pf:SLTTransglycosylase SLT domain
 pf:SLT_4
 pf:SNARESNARE domain
 pf:SQHop_cyclase_NSqualene-hopene cyclase N-terminal domain
 pf:SRTM1Serine-rich and transmembrane domain-containing protein 1
 pf:SWIMSWIM zinc finger
 pf:SecD_SecFProtein export membrane protein
 pf:SfLAPSap, sulfolipid-1-addressing protein
 pf:Stress-antifungSalt stress response/antifungal
 pf:T4SS_pilin
 pf:TNFTNF(Tumour Necrosis Factor) family
 pf:TPR_10Tetratricopeptide repeat
 pf:TPR_14Tetratricopeptide repeat
 pf:TPR_19Tetratricopeptide repeat
 pf:TPR_2Tetratricopeptide repeat
 pf:TPR_20Tetratricopeptide repeat
 pf:TPR_6Tetratricopeptide repeat
 pf:TamBTamB, inner membrane protein subunit of TAM complex
 pf:Urb2Urb2/Npa2 family
 pf:VIT1VIT family
 pf:VP4_2Viral protein VP4 subunit
 pf:YniBYniB-like protein
 pf:ZSWIM1-3_RNaseH-like
 pf:adh_shortshort chain dehydrogenase
 pf:adh_short_C2Enoyl-(Acyl carrier protein) reductase
 pf:m04gp34like

hsa:7124 pf:TNF

pps:100977674 pf:TNF


ptr:494186 pf:TNF

pon:100447558 pf:TNF

nle:100583968 pf:TNF

mcc:715467 pf:TNF

rro:104661913 pf:TNF

mcf:102139631 pf:TNF

umr:103682322 pf:TNF

ptg:102958919 pf:TNF

aml:100471563 pf:TNF

cfa:403922 pf:TNF

fca:493755 pf:TNF

pale:102887632 pf:TNF

cjc:100397484 pf:TNF

ecb:100033834 pf:TNF

bacu:103005897 pf:TNF

lve:103083231 pf:TNF

ssc:397086 pf:TNF

ngi:103724452 pf:TNF pf:DUF956

cfr:102510424 pf:TNF

myb:102246703 pf:TNF

myd:102758774 pf:TNF

chx:100861232 pf:TNF

bom:102277911 pf:TNF

bta:280943 pf:TNF

ocu:100009088 pf:TNF

tup:102497973 pf:TNF

phd:102321354 pf:TNF

oas:443540 pf:TNF

cge:100764780 pf:TNF


hgl:101718432 pf:PD-C2-AF1 pf:TNF

mmu:21926 pf:TNF pf:DUF956

shr:100921875 pf:Form-deh_trans pf:TNF

mdo:100023069 pf:Form-deh_trans pf:InhA-like_MAM pf:TNF

pss:102449532 pf:TNF

cmy:102936332 pf:TNF

acs:100561101 pf:TNF

pbi:103052729 pf:TNF

oaa:100085643 pf:TNF

amj:102569751 pf:TNF

asn:102378738 pf:TNF

lcm:102357196 pf:DUF2633 pf:DUF2140 pf:TNF

xla:100137625 pf:TNF

xtr:100134991 pf:TNF

tru:654303 pf:SNARE pf:Dam pf:T4SS_pilin pf:TNF

dre:405785 pf:PDR_CDR pf:Bys1 pf:TNF

xma:102225449 pf:TNF

ola:101159531 pf:PBP_N pf:TNF

mze:101469924 pf:MFS_1 pf:TNF

cmk:103189288 pf:TNF pf:C1q

fab:101821879 pf:Urb2 pf:LAT2 pf:TNF pf:DUF4457

mgp:100538700 pf:TNF pf:LAT2

ccw:104688239 pf:LAT2 pf:TNF pf:DUF4457

clv:102098274 pf:LAT2 pf:TNF pf:DUF4457

phi:102108039 pf:Urb2 pf:SRTM1 pf:LppA pf:TNF pf:DUF4457

tgu:100231136 pf:LAT2 pf:TNF

gga:429064 pf:YniB pf:PAP_PilO pf:TNF

apla:101789486 pf:TNF

gfr:102044299 pf:LAT2 pf:LppA pf:TNF

fch:102056618 pf:LAT2 pf:TNF

fpg:101916678 pf:LAT2 pf:TNF


lgi:LOTGIDRAFT_237341 pf:TNF

crg:105344743 pf:TNF

hmg:101238716 pf:FAM70 pf:MMM1 pf:DUF4834 pf:Collagen pf:TNF

obi:106873185 pf:DUF6377 pf:m04gp34like pf:TNF

psq:PUNSTDRAFT_116518 pf:PNP_UDP_1

aja:AJAP_10300 pf:CwsA

ahi:VU14_16235 pf:HTH_18 pf:HTH_AraC

pvu:PHAVU_007G050800g pf:Stress-antifung pf:Stress-antifung

scu:SCE1572_39585 pf:Cu2_monoox_C

tmz:Tmz1t_3478 pf:MacB_PCD pf:FtsX

rta:Rta_25430 pf:AsmA_2 pf:TamB

aha:AHA_1294 pf:HTH_18 pf:HTH_AraC

syw:SYNW2021 pf:Fe_bilin_red

bdi:100828484 pf:ZSWIM1-3_RNaseH-like pf:SWIM

mrd:Mrad2831_4432 pf:PAS_3 pf:PAS_4 pf:DUF374 pf:PAS_8 pf:PAS_4 pf:PAS_3 pf:HisKA pf:HATPase_c pf:HATPase_c_3 pf:HPTransfase pf:Response_reg

pfo:Pfl01_4086 pf:PAS pf:PAS_4 pf:PAS_8 pf:PAS_9 pf:GGDEF pf:GGDEF_2 pf:EAL

pses:PSCI_3601 pf:MLTD_N pf:SLT pf:OapA pf:LysM pf:DUF3071 pf:LysM pf:LysM

rge:RGE_30570 pf:HupE_UreJ_2 pf:Cation_efflux pf:GtrA

bna:106406931 pf:GRAM




cti:RALTA_A2115 pf:LysM pf:TPR_14 pf:TPR_19 pf:Response_reg_2 pf:TPR_20 pf:TPR_19 pf:TPR_14 pf:TPR_2 pf:TPR_6 pf:TPR_10

kphy:AOZ06_41045 pf:SQHop_cyclase_N


smz:SMD_3373 pf:CusB_dom_1 pf:HlyD_D23 pf:HlyD_3 pf:Biotin_lipoyl_2 pf:Biotin_lipoyl pf:HlyD_3 pf:Biotin_lipoyl_2 pf:CSD2

sye:Syncc9902_1623 pf:KR pf:adh_short pf:RmlD_sub_bind pf:Epimerase pf:GDP_Man_Dehyd pf:NAD_binding_10 pf:adh_short_C2 pf:ADH_zinc_N pf:DUF2999

dds:Ddes_2079 pf:SLT_4 pf:SLT

gtr:GLOTRDRAFT_56098 pf:PNP_UDP_1

oto:ADJ79_11830 pf:ACR_tran pf:MMPL pf:SecD_SecF pf:Patched pf:Phage_GPL pf:MMPL pf:SecD_SecF

pca:Pcar_1195 pf:Flg_bb_rod pf:DUF3458

tpr:Tpau_0021 pf:CwsA

vsa:VSAL_I1213 pf:SfLAP pf:LysE pf:VIT1 pf:Colicin_V

aym:YM304_02440 pf:Lactamase_B_3 pf:Lactamase_B_2 pf:DUF1409 pf:Rieske

gmx:100815190 pf:VP4_2 pf:60KD_IMP pf:DUF2062

ssm:Spirs_4023 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:Pyr_redox_2