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Motifs : | pf:A1_Propeptide | A1 Propeptide
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| pf:ANT | Phage antirepressor protein KilAC domain
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| pf:ATP11 | ATP11 protein
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| pf:AalphaY_MDB | Mating type protein A alpha Y mating type dependent binding region
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| pf:Arg_repressor | Arginine repressor, DNA binding domain
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| pf:DDE_3 | DDE superfamily endonuclease
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| pf:DUF1062 | Protein of unknown function (DUF1062)
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| pf:DUF1450 | Protein of unknown function (DUF1450)
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| pf:DUF1758 | Putative peptidase (DUF1758)
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| pf:DUF1831 | Putative amino acid metabolism
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| pf:DUF4817 | Domain of unknown function (DUF4817)
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| pf:DUF488 | Protein of unknown function, DUF488
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| pf:DUF5641 | |
| pf:Fe_dep_repress | Iron dependent repressor, N-terminal DNA binding domain
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| pf:FeoC | FeoC like transcriptional regulator
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| pf:GerE | Bacterial regulatory proteins, luxR family
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| pf:GntR | Bacterial regulatory proteins, gntR family
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| pf:HMG14_17 | HMG14 and HMG17
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| pf:HTH_1 | Bacterial regulatory helix-turn-helix protein, lysR family
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| pf:HTH_10 | HTH DNA binding domain
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| pf:HTH_11 | HTH domain
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| pf:HTH_17 | Helix-turn-helix domain
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| pf:HTH_20 | Helix-turn-helix domain
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| pf:HTH_22 | HTH domain
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| pf:HTH_23 | Homeodomain-like domain
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| pf:HTH_24 | Winged helix-turn-helix DNA-binding
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| pf:HTH_26 | Cro/C1-type HTH DNA-binding domain
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| pf:HTH_27 | Winged helix DNA-binding domain
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| pf:HTH_28 | Helix-turn-helix domain
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| pf:HTH_29 | Winged helix-turn helix
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| pf:HTH_30 | PucR C-terminal helix-turn-helix domain
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| pf:HTH_32 | Homeodomain-like domain
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| pf:HTH_36 | Helix-turn-helix domain
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| pf:HTH_38 | Helix-turn-helix domain
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| pf:HTH_40 | Helix-turn-helix domain
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| pf:HTH_41 | Helix-turn-helix domain
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| pf:HTH_48 | |
| pf:HTH_5 | Bacterial regulatory protein, arsR family
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| pf:HTH_50 | |
| pf:HTH_6 | Helix-turn-helix domain, rpiR family
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| pf:HTH_7 | Helix-turn-helix domain of resolvase
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| pf:HTH_9 | RNA polymerase III subunit RPC82 helix-turn-helix domain
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| pf:HTH_AsnC-type | AsnC-type helix-turn-helix domain
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| pf:HTH_Crp_2 | Crp-like helix-turn-helix domain
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| pf:HTH_DeoR | DeoR-like helix-turn-helix domain
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| pf:HTH_IclR | IclR helix-turn-helix domain
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| pf:HTH_Mga | M protein trans-acting positive regulator (MGA) HTH domain
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| pf:HTH_PafC | |
| pf:HTH_Tnp_1_2 | Helix-turn-helix of insertion element transposase
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| pf:HTH_Tnp_4 | Helix-turn-helix of DDE superfamily endonuclease
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| pf:HTH_Tnp_IS630 | Transposase
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| pf:HTH_Tnp_ISL3 | Helix-turn-helix domain of transposase family ISL3
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| pf:HTH_Tnp_Tc3_2 | Transposase
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| pf:IBD | Transcription-initiator DNA-binding domain IBD
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| pf:IF2_N | Translation initiation factor IF-2, N-terminal region
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| pf:IF3_C | Translation initiation factor IF-3, C-terminal domain
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| pf:Ig_C19orf38 | |
| pf:Integrase_H2C2 | |
| pf:KAP_NTPase | KAP family P-loop domain
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| pf:LZ_Tnp_IS481 | leucine-zipper of insertion element IS481
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| pf:LacI | Bacterial regulatory proteins, lacI family
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| pf:LexA_DNA_bind | LexA DNA binding domain
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| pf:MarR | MarR family
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| pf:MarR_2 | MarR family
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| pf:Mga | Mga helix-turn-helix domain
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| pf:NO_synthase | Nitric oxide synthase, oxygenase domain
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| pf:NUMOD1 | NUMOD1 domain
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| pf:PCI | PCI domain
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| pf:Peptidase_A17 | Pao retrotransposon peptidase
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| pf:Phage_p2_ORF12 | |
| pf:Phage_pRha | Phage regulatory protein Rha (Phage_pRha)
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| pf:Phage_terminase | Phage terminase small subunit
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| pf:PheRS_DBD1 | |
| pf:Pre-SET | Pre-SET motif
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| pf:RE_R_Pab1 | R.Pab1 restriction endonuclease
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| pf:RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase)
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| pf:RWP-RK | RWP-RK domain
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| pf:Rrf2 | Transcriptional regulator
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| pf:Rv2175c_wHTH | |
| pf:SET | SET domain
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| pf:Sigma70_ECF | ECF sigma factor
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| pf:Sigma70_r3 | Sigma-70 region 3
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| pf:Sigma70_r4 | Sigma-70, region 4
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| pf:Sigma70_r4_2 | Sigma-70, region 4
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| pf:SpoIIID | Stage III sporulation protein D
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| pf:TetR_N | Bacterial regulatory proteins, tetR family
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| pf:Tma16 | Translation machinery-associated protein 16
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| pf:Transposase_1 | Transposase (partial DDE domain)
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| pf:TrmB | Sugar-specific transcriptional regulator TrmB
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| pf:Type_III_SycN | |
| pf:UPF0122 | Putative helix-turn-helix protein, YlxM / p13 like
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| pf:Xre-like-HTH | |
| pf:YgbA_NO | Nitrous oxide-stimulated promoter
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| pf:ZSWIM1-3_helical | |
| pf:rve | Integrase core domain
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| pf:zf-met | Zinc-finger of C2H2 type
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