Search common motifs in selected sequences


  
Motifs : pf:ATHILAATHILA ORF-1 family
 pf:ApoB100_CApolipoprotein B100 C terminal
 pf:Attachment_P66Borrelia burgdorferi attachment protein P66
 pf:COQ9_N
 pf:CRFCorticotropin-releasing factor family
 pf:DUF3514Protein of unknown function (DUF3514)
 pf:DUF3802Protein of unknown function (DUF3802)
 pf:DUF3837Domain of unknown function (DUF3837)
 pf:DUF5055Domain of unknown function (DUF5055)
 pf:DUF5867
 pf:DUF6262
 pf:DUF915Alpha/beta hydrolase of unknown function (DUF915)
 pf:Drf_FH3Diaphanous FH3 Domain
 pf:Glutaredoxin2_CGlutaredoxin 2, C terminal domain
 pf:HAD_2Haloacid dehalogenase-like hydrolase
 pf:HMMR_NHyaluronan mediated motility receptor N-terminal
 pf:HTH_20Helix-turn-helix domain
 pf:HTH_23Homeodomain-like domain
 pf:HTH_24Winged helix-turn-helix DNA-binding
 pf:HTH_3Helix-turn-helix
 pf:HTH_38Helix-turn-helix domain
 pf:HTH_40Helix-turn-helix domain
 pf:HTH_50
 pf:HTH_AraCBacterial regulatory helix-turn-helix proteins, AraC family
 pf:HTH_AsnC-typeAsnC-type helix-turn-helix domain
 pf:HTH_IclRIclR helix-turn-helix domain
 pf:HTH_Tnp_1_2Helix-turn-helix of insertion element transposase
 pf:Htt_N-HEAT
 pf:LaLa domain
 pf:Longin_2
 pf:Med15_fungiMediator complex subunit 15
 pf:MiaE_2
 pf:NopsnoRNA binding domain, fibrillarin
 pf:Oxidored_molybOxidoreductase molybdopterin binding domain
 pf:PB2_cap-binding
 pf:Put_DNA-bind_NPutative DNA-binding protein N-terminus
 pf:Rep3_C
 pf:Reprolysin_4Metallo-peptidase family M12B Reprolysin-like
 pf:Sigma54_DBDSigma-54, DNA binding domain
 pf:Sigma70_r4_2Sigma-70, region 4
 pf:TFB6Subunit 11 of the general transcription factor TFIIH
 pf:TRMN2,N2-dimethylguanosine tRNA methyltransferase
 pf:TetR_C_28
 pf:TetR_C_30
 pf:TetR_C_33
 pf:TetR_NBacterial regulatory proteins, tetR family
 pf:TnsDTn7-like transposition protein D
 pf:UPF0122Putative helix-turn-helix protein, YlxM / p13 like
 pf:WYLWYL domain
 pf:YdaS_toxin
 pf:YhdBYhdB-like protein

ljh:LJP_0239c pf:TetR_N pf:HTH_Tnp_1_2

ljo:LJ_0242 pf:TetR_N pf:HTH_Tnp_1_2

ljn:T285_01310 pf:TetR_N pf:HTH_Tnp_1_2

lga:LGAS_0237 pf:TetR_N

lkl:DKL58_02795 pf:HAD_2 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_3 pf:DUF3514

lpd:AYR62_06170 pf:DUF6262 pf:TetR_N pf:DUF3802

lhw:BSQ49_11525 pf:TetR_N pf:Drf_FH3

xak:KIMC2_06250 pf:DUF6262 pf:Rep3_C pf:TetR_N

lcl:LOCK919_1721 pf:DUF6262 pf:TetR_N

lcz:LCAZH_1537 pf:DUF6262 pf:TetR_N

lbm:DS830_04165 pf:TetR_N pf:Oxidored_molyb

xap:XA3_04400 pf:DUF6262 pf:TetR_N

lcx:LCA12A_0878 pf:DUF6262 pf:TetR_N

lpi:LBPG_00288 pf:DUF6262 pf:TetR_N

lbn:LBUCD034_1482 pf:TetR_N pf:Reprolysin_4

lhb:D1010_04515 pf:DUF6262 pf:TetR_N pf:TetR_C_33

lca:LSEI_1553 pf:DUF6262 pf:TetR_N

lcb:LCABL_17670 pf:DUF6262 pf:TetR_N

lce:LC2W_1718 pf:DUF6262 pf:TetR_N

lcs:LCBD_1751 pf:DUF6262 pf:TetR_N

lcw:BN194_17340 pf:DUF6262 pf:TetR_N

lpap:LBPC_1476 pf:DUF6262 pf:TetR_N

lpq:AF91_06130 pf:DUF6262 pf:TetR_N

lge:C269_04845 pf:HAD_2 pf:TetR_N

lmal:LM596_12005 pf:TetR_N

lrg:LRHM_1517 pf:DUF6262 pf:TetR_N pf:Med15_fungi

lrh:LGG_01580 pf:DUF6262 pf:TetR_N pf:Med15_fungi

lro:LOCK900_1527 pf:DUF6262 pf:TetR_N pf:Med15_fungi

lra:LRHK_1554 pf:DUF6262 pf:TetR_N

lrc:LOCK908_1620 pf:DUF6262 pf:TetR_N

lrl:LC705_01565 pf:DUF6262 pf:TetR_N

lgas:LG045_08755 pf:TetR_N

lhil:G8J22_02454 pf:TetR_N

liq:KBW87_01255 pf:TetR_N pf:TetR_C_33

acto:C3V41_01665 pf:HTH_23 pf:TetR_N pf:HTH_AsnC-type pf:HTH_24 pf:HTH_20 pf:YdaS_toxin pf:TetR_C_33

lros:LROSL1_0053 pf:TetR_N pf:HTH_Tnp_1_2 pf:TnsD pf:TetR_C_33

ssob:DK181_09255 pf:HMMR_N pf:TetR_N

actt:DDD63_11515 pf:TetR_N pf:TetR_C_33


ssa:SSA_1924 pf:TetR_N

lol:LACOL_0365 pf:TetR_N pf:DUF915

cac:CA_C2773 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_50 pf:TetR_C_33

cae:SMB_G2809 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_50 pf:TetR_C_33

cay:CEA_G2781 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_50 pf:TetR_C_33

stj:SALIVA_1876 pf:TetR_N

ssah:HSISS4_01709 pf:TetR_N

amas:QU670_14285 pf:TetR_N pf:TetR_C_33

fcp:M3M37_03690 pf:TetR_N pf:TetR_C_33 pf:WYL

strs:SSAL8618_09245 pf:TetR_N

acap:MANAM107_09930 pf:COQ9_N pf:TetR_N pf:TetR_C_33 pf:TetR_C_28

smut:SMUGS5_06330 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_38

stf:Ssal_00203 pf:TetR_N

caun:CLAUR_039580 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_50 pf:TetR_C_33

cfb:CLFE_011850 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_50 pf:TetR_C_33

clos:DMR38_17985 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_33

crw:CROST_036090 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_50 pf:TetR_C_33

cah:CAETHG_1493 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_33

clj:CLJU_c35860 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_33

smc:SmuNN2025_0682 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_38

smj:SMULJ23_0690 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_38

smu:SMU_1419 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_38

smua:SMUFR_1232 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_38

ssr:SALIVB_1941 pf:TetR_N

lali:LA20249_02075 pf:TetR_N pf:Put_DNA-bind_N pf:HTH_Tnp_1_2 pf:Sigma54_DBD pf:HTH_38 pf:TFB6

seqi:A6J79_01945 pf:TetR_N

bthv:CQJ30_01980 pf:HTH_50 pf:TetR_N pf:HTH_Tnp_1_2 pf:Sigma70_r4_2 pf:HTH_38

sfer:NCTC12278_00754 pf:TetR_N pf:PB2_cap-binding

alil:D5R93_00520 pf:TRM pf:TetR_N pf:COQ9_N pf:TetR_C_33

ooe:OEOE_0395 pf:TetR_N pf:HTH_24 pf:TetR_C_33

ova:OBV_29050 pf:HTH_50 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_AraC pf:MiaE_2 pf:TetR_C_33

ski:D7D50_02210 pf:TetR_N pf:HTH_Tnp_1_2

ane:ATCC27039_21960 pf:TetR_N pf:TetR_C_33

avc:NCTC10951_02129 pf:TetR_N pf:TetR_C_33

cpae:CPAST_c08890 pf:HTH_Tnp_1_2 pf:TetR_N pf:TetR_C_33

cpas:Clopa_0245 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_50 pf:ATHILA pf:TetR_C_33

cpat:CLPA_c08890 pf:HTH_Tnp_1_2 pf:TetR_N pf:TetR_C_33

spj:MGAS2096_Spy1116 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_50 pf:TetR_C_33

srat:FY406_09890 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_50

scf:Spaf_0266 pf:TetR_N pf:HTH_Tnp_1_2

carg:RSJ17_07185 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_50 pf:TetR_C_33 pf:La

oen:DSM07_07350 pf:TetR_N pf:HTH_24 pf:Attachment_P66 pf:TetR_C_33

schj:DDV21_004850 pf:TetR_N

bsue:BS3272_08470 pf:TetR_N

mmx:MmarC6_1636 pf:HAD_2 pf:TetR_N pf:HTH_Tnp_1_2 pf:UPF0122 pf:HTH_40 pf:DUF5055 pf:DUF3837 pf:Glutaredoxin2_C pf:CRF

sgo:SGO_2083 pf:TetR_N pf:HTH_50 pf:TetR_C_33

pfre:RM25_0183 pf:TetR_N pf:HTH_3 pf:HTH_IclR pf:HTH_AsnC-type

cint:HZF06_08790 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_50 pf:TetR_C_33

cle:Clole_4102 pf:HTH_Tnp_1_2 pf:TetR_N pf:TetR_C_33 pf:Longin_2

thyr:P4S50_04225 pf:TetR_N pf:HTH_Tnp_1_2 pf:Nop

trm:JO41_01230 pf:TetR_N pf:DUF5867 pf:TetR_C_33

vpy:HZI73_07245 pf:TetR_N pf:TetR_C_33

pbd:PBOR_30485 pf:TetR_N pf:Htt_N-HEAT pf:TetR_C_33

pson:JI735_12930 pf:Htt_N-HEAT pf:TetR_N pf:TetR_C_33

sanc:SANR_1776 pf:TetR_N

acop:RI196_17825 pf:TetR_N pf:HTH_Tnp_1_2 pf:Sigma70_r4_2 pf:YhdB pf:TetR_C_30

apak:AP3564_04215 pf:TetR_N pf:HTH_Tnp_1_2 pf:Sigma70_r4_2 pf:YhdB pf:TetR_C_30

paen:P40081_32030 pf:TetR_N pf:TetR_C_33

paeq:R50912_28840 pf:TetR_N pf:TetR_C_33

acht:bsdcttw_42140 pf:TetR_N pf:HTH_50 pf:TetR_C_33

pcx:LPB68_08005 pf:TetR_N pf:TetR_C_33

phx:KGNDJEFE_01301 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_33 pf:ApoB100_C