Search common motifs in selected sequences


  
Motifs : pf:BB domain
 pf:Big_4Bacterial Ig-like domain (group 4)
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_C
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DNA_primase_SDNA primase small subunit
 pf:DUF1999Protein of unknown function (DUF1999)
 pf:DUF6259
 pf:GH3GH3 auxin-responsive promoter
 pf:Glyco_hydro_65CGlycosyl hydrolase family 65, C-terminal domain
 pf:LigD_NDNA polymerase Ligase (LigD)
 pf:LigD_Prim-Pol
 pf:MamL-1MamL-1 domain
 pf:Mit_proteolipMitochondrial proteolipid
 pf:PI_PP_I
 pf:RNA_ligaseRNA ligase
 pf:RUBY_RBDX
 pf:RecombinaseRecombinase
 pf:Stealth_CR3Stealth protein CR3, conserved region 3
 pf:TMEM101TMEM101 protein family
 pf:Thr_synth_NThreonine synthase N terminus
 pf:Vps54Vps54-like protein
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

lsp:Bsph_p130 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

bco:Bcell_0182 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

pms:KNP414_03977 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pmw:B2K_27655 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pmq:PM3016_5352 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pjd:Pjdr2_1127 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

pgm:PGRAT_14595 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

paen:P40081_15495 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

gym:GYMC10_0669 pf:DNA_ligase_A_M pf:MamL-1 pf:DNA_ligase_A_C

tki:TKV_c19040 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

tto:Thethe_00683 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

twi:Thewi_2144 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

tex:Teth514_0952 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:PI_PP_I pf:DNA_ligase_A_C

thx:Thet_1965 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:PI_PP_I pf:DNA_ligase_A_C

tbo:Thebr_0487 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:PI_PP_I pf:DNA_ligase_A_C

tpd:Teth39_0475 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:PI_PP_I pf:DNA_ligase_A_C

tsh:Tsac_1306 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

tit:Thit_1868 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

tmt:Tmath_1843 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

ttm:Tthe_0704 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

txy:Thexy_0579 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

drm:Dred_2002 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

ppo:PPM_2737 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

dku:Desku_0983 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

psab:PSAB_20545 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

pth:PTH_1243 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

dgi:Desgi_1818 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

aba:Acid345_0779 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

cmr:Cycma_1183 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DUF6259

csh:Closa_1417 pf:DNA_ligase_A_M pf:RUBY_RBDX pf:DNA_ligase_A_C

bao:BAMF_0926 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase

dru:Desru_1852 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cmc:CMN_02036 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mta:Moth_1488 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:DNA_ligase_C

cmi:CMM_2074 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

dca:Desca_1165 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

afg:AFULGI_00019760 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_C pf:DNA_ligase_A_C pf:DNA_ligase_OB_2


mmar:MODMU_2075 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C


rhl:LPU83_pLPU83c0571 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

zpr:ZPR_3654 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

hor:Hore_03420 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

mab:MAB_1033 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

may:LA62_05210 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

maz:LA61_05120 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

svi:Svir_34920 pf:LigD_N pf:Recombinase pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sth:STH1797 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cce:Ccel_0365 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_C

dec:DCF50_p2126 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

ded:DHBDCA_p2112 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

ngg:RG540_CH06180 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

bbe:BBR47_36460 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

csd:Clst_1550 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

css:Cst_c16050 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

gfo:GFO_0300 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:GH3

toc:Toce_0249 pf:mRNA_cap_enzyme pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mabb:MASS_1028 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

drs:DEHRE_05395 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mak:LH56_17820 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmv:MYCMA_0544 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

ppq:PPSQR21_003370 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:TMEM101 pf:DNA_ligase_A_C

baz:BAMTA208_06575 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

bql:LL3_02285 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

bxh:BAXH7_01346 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

gor:KTR9_4500 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

bamb:BAPNAU_1647 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

ppy:PPE_00335 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:TMEM101 pf:DNA_ligase_A_C

ead:OV14_c0035 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

paej:H70737_05065 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

ppol:X809_01490 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:TMEM101 pf:DNA_ligase_A_C

bsh:BSU6051_20500 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:Vps54 pf:DNA_ligase_A_C

bsq:B657_20500 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:Vps54 pf:DNA_ligase_A_C

bsu:BSU20500 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:Vps54 pf:DNA_ligase_A_C

bsul:BSUA_02207 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:Vps54 pf:DNA_ligase_A_C

bsut:BSUB_02207 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:Vps54 pf:DNA_ligase_A_C

cpi:Cpin_6404 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:GH3

rlb:RLEG3_18615 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

bamy:V529_20630 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

fal:FRAAL4382 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

nno:NONO_c07420 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

bcl:ABC2809 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C pf:B pf:DNA_ligase_OB_2

nbr:O3I_003805 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sus:Acid_7844 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ave:Arcve_0209 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_C pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

dfe:Dfer_0365 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C pf:LigD_Prim-Pol pf:DNA_primase_S

gst:HW35_02605 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol

clb:Clo1100_0393 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C

nko:Niako_4922 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol

pste:PSTEL_06015 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

slp:Slip_1509 pf:mRNA_cap_enzyme pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

tjr:TherJR_1554 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

ast:Asulf_01568 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

cwo:Cwoe_4716 pf:LigD_N pf:DUF1999 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

fgi:OP10G_3151 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mph:MLP_04810 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

pdu:PDUR_06235 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

rei:IE4771_CH00561 pf:Glyco_hydro_65C pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

bju:BJ6T_42920 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:Mit_proteolip

cfl:Cfla_1903 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

msa:Mycsm_05316 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Stealth_CR3 pf:Big_4 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Thr_synth_N pf:DNA_ligase_A_C