Search common motifs in selected sequences


  
Motifs : pf:Anticodon_3
 pf:Big_4Bacterial Ig-like domain (group 4)
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DNA_primase_SDNA primase small subunit
 pf:DUF1999Protein of unknown function (DUF1999)
 pf:DUF6052
 pf:DUF6643
 pf:DUF6866_C
 pf:EAD7
 pf:GDE_CAmylo-alpha-1,6-glucosidase
 pf:Glyco_hydro_65CGlycosyl hydrolase family 65, C-terminal domain
 pf:LigD_NDNA polymerase Ligase (LigD)
 pf:LigD_Prim-Pol
 pf:MannoseP_isomerMannose-6-phosphate isomerase
 pf:Met_10Met-10+ like-protein
 pf:RNA_ligaseRNA ligase
 pf:RecombinaseRecombinase
 pf:SfsASugar fermentation stimulation protein
 pf:Stealth_CR3Stealth protein CR3, conserved region 3
 pf:Thr_synth_NThreonine synthase N terminus
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

mau:Micau_1144 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_M

mil:ML5_1390 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_M

vma:VAB18032_10310 pf:LigD_N pf:DNA_ligase_A_M

ams:AMIS_9300 pf:LigD_N pf:DNA_ligase_A_M

actn:L083_1262 pf:LigD_N pf:DNA_ligase_A_M

afs:AFR_06270 pf:LigD_N pf:DNA_ligase_A_M

ase:ACPL_1154 pf:MannoseP_isomer pf:LigD_N pf:DNA_ligase_A_M pf:EAD7

cfi:Celf_0800 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

cai:Caci_5248 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF6643 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

all:CRK60828 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

alu:BB31_07905 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

aoi:AORI_4401 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

aja:AJAP_16790 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

svi:Svir_34920 pf:LigD_N pf:Recombinase pf:DNA_ligase_A_M pf:DNA_ligase_A_C

amd:AMED_5275 pf:LigD_N pf:DNA_ligase_A_M

amm:AMES_5213 pf:LigD_N pf:DNA_ligase_A_M

amn:RAM_26870 pf:LigD_N pf:DNA_ligase_A_M

amz:B737_5213 pf:LigD_N pf:DNA_ligase_A_M

sesp:BN6_42910 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

nsr:NS506_07750 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:GDE_C pf:DNA_ligase_A_C

pdx:Psed_3272 pf:LigD_N pf:DNA_ligase_A_M pf:LigD_Prim-Pol

rrz:CS378_21645 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

pmad:BAY61_28605 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

led:BBK82_36775 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

rav:AAT18_06535 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

rhw:BFN03_13610 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

amq:AMETH_4914 pf:LigD_N pf:Glyco_hydro_65C pf:DNA_ligase_A_M

kphy:AOZ06_15230 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

cwo:Cwoe_4716 pf:LigD_N pf:DUF1999 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

ntp:CRH09_04330 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rha:RHA1_ro05048 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

roa:Pd630_LPD01566 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mmar:MODMU_2075 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rop:ROP_51120 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mft:XA26_13320 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Thr_synth_N pf:DNA_ligase_A_C

rhu:A3Q40_03914 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

cry:B7495_07570 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

asd:AS9A_4180 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

myv:G155_06665 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Thr_synth_N pf:DNA_ligase_A_C

nsl:BOX37_03275 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

mdx:BTO20_29155 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

reb:XU06_21400 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mjl:Mjls_4732 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

ncy:NOCYR_0694 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

req:REQ_10780 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mphl:MPHLCCUG_00892 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Big_4 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Thr_synth_N pf:DNA_ligase_A_C

rpy:Y013_20910 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Big_4 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mav:MAV_1056 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

rhb:NY08_3398 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mvq:MYVA_4735 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Big_4 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Thr_synth_N pf:DNA_ligase_A_C

mao:MAP4_2980 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mavi:RC58_14795 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mavu:RE97_14820 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mpa:MAP_0880 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mva:Mvan_4915 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

rey:O5Y_21290 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mava:LA64_04705 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mavd:NF84_04590 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mavr:LA63_04695 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

msb:LJ00_27545 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF6052 pf:Thr_synth_N pf:DNA_ligase_A_C

msg:MSMEI_5419 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF6052 pf:Thr_synth_N pf:DNA_ligase_A_C

msh:LI98_27555 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF6052 pf:Thr_synth_N pf:DNA_ligase_A_C

msm:MSMEG_5570 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF6052 pf:Thr_synth_N pf:DNA_ligase_A_C

msn:LI99_27550 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF6052 pf:Thr_synth_N pf:DNA_ligase_A_C

nbr:O3I_003805 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mkm:Mkms_4438 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmc:Mmcs_4352 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

nno:NONO_c07420 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

rer:RER_45220 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

nfr:ERS450000_03433 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rfa:A3L23_01552 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

nfa:NFA_6770 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mrh:MycrhN_3288 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

rhs:A3Q41_01804 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

msa:Mycsm_05316 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Stealth_CR3 pf:Big_4 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Thr_synth_N pf:DNA_ligase_A_C

gpo:GPOL_c05170 pf:LigD_Prim-Pol pf:SfsA pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

gta:BCM27_23555 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mye:AB431_24205 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

mll:B1R94_23495 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

gor:KTR9_4500 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

gbr:Gbro_4532 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Anticodon_3 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

ido:I598_0187 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

nml:Namu_0128 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mhad:B586_06195 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmal:CKJ54_04600 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Met_10 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mcb:Mycch_4291 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mne:D174_22685 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Big_4 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

myn:MyAD_22245 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Big_4 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

mcv:BN43_20408 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mcx:BN42_20748 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmi:MMAR_4573 pf:LigD_Prim-Pol pf:DNA_primase_S pf:DUF6866_C pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

maf:MAF_09470 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbb:BCG_0992 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbk:K60_010050 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbm:BCGMEX_0963 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbo:BQ2027_MB0963 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbt:JTY_0962 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbx:BCGT_0751 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbz:LH58_05110 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mce:MCAN_09381 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmic:RN08_1046 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C