Search common motifs in selected sequences


  
Motifs : pf:A2L_zn_ribbonA2L zinc ribbon domain
 pf:AMP-bindingAMP-binding enzyme
 pf:AMP-binding_CAMP-binding enzyme C-terminal domain
 pf:APG6_N
 pf:Amdase
 pf:ArdAAntirestriction protein (ArdA)
 pf:B12-bindingB12 binding domain
 pf:BRCTBRCA1 C Terminus (BRCT) domain
 pf:Bacteriocin_IIiAureocin-like type II bacteriocin
 pf:COG7Golgi complex component 7 (COG7)
 pf:Chlor_dismutaseChlorite dismutase
 pf:ComFBLate competence development protein ComFB
 pf:CondensationCondensation domain
 pf:DDE_Tnp_1Transposase DDE domain
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_A_NDNA ligase N terminus
 pf:DNA_ligase_adenNAD-dependent DNA ligase adenylation domain
 pf:DUF1128Protein of unknown function (DUF1128)
 pf:DUF1617Protein of unknown function (DUF1617)
 pf:DUF3303Protein of unknown function (DUF3303)
 pf:DUF3386Protein of unknown function (DUF3386)
 pf:DUF354Protein of unknown function (DUF354)
 pf:DUF3801Protein of unknown function (DUF3801)
 pf:DUF5009Domain of unknown function (DUF5009)
 pf:DUF5741
 pf:EpimeraseNAD dependent epimerase/dehydratase family
 pf:FANCI_S2FANCI solenoid 2
 pf:FYVEFYVE zinc finger
 pf:FYVE_2FYVE-type zinc finger
 pf:FecR_C
 pf:FtsX_ECD
 pf:G1_gp67_C
 pf:GFO_IDH_MocA_C2
 pf:GrlRT3SS negative regulator,GrlR
 pf:HAD_2Haloacid dehalogenase-like hydrolase
 pf:HTH_17Helix-turn-helix domain
 pf:HVO_2753_ZBP
 pf:Heme_oxygenaseHeme oxygenase
 pf:Hydrolasehaloacid dehalogenase-like hydrolase
 pf:Hydrolase_likeHAD-hyrolase-like
 pf:IQ_SEC7_PHPH domain
 pf:KorBKorB domain
 pf:Lig_C
 pf:Lipase_GDSLGDSL-like Lipase/Acylhydrolase
 pf:LpxBLipid-A-disaccharide synthetase
 pf:LysMLysM domain
 pf:MCM_C
 pf:MapZ_EC1
 pf:Mcp5_PHMeiotic cell cortex C-terminal pleckstrin homology
 pf:NAD_binding_4Male sterility protein
 pf:NIFNLI interacting factor-like phosphatase
 pf:Oxidored_nitroNitrogenase component 1 type Oxidoreductase
 pf:PHPH domain
 pf:PH_13Pleckstrin homology domain
 pf:PP-bindingPhosphopantetheine attachment site
 pf:PSP1PSP1 C-terminal conserved region
 pf:Pesticin_RB
 pf:RAPRAP domain
 pf:RNA_bindRNA binding domain
 pf:RNA_lig_T4_1RNA ligase
 pf:RNA_ligaseRNA ligase
 pf:Radical_SAMRadical SAM superfamily
 pf:RecG_NRecG N-terminal helical domain
 pf:RhoGAPRhoGAP domain
 pf:RhoGEFRhoGEF domain
 pf:Ribosomal_L7AeRibosomal protein L7Ae/L30e/S12e/Gadd45 family
 pf:Ribosomal_S17eRibosomal S17
 pf:RmlD_sub_bindRmlD substrate binding domain
 pf:RraBRegulator of ribonuclease activity B
 pf:Rv2175c_wHTH
 pf:SepSecSO-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS
 pf:SpoIIAA-likeSpoIIAA-like
 pf:SyncollinSyncollin
 pf:TRAMTRAM domain
 pf:TRAM_2
 pf:TransferaseTransferase family
 pf:UPF0004Uncharacterized protein family UPF0004
 pf:UPF0175Uncharacterised protein family (UPF0175)
 pf:YjdM_Zn_Ribbon
 pf:fvmRadSAM-pep
 pf:tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)
 pf:tRNA-synt_HisHistidyl-tRNA synthetase
 pf:ubiquitinUbiquitin family
 pf:zf-RING_5zinc-RING finger domain
 pf:zf-RING_UBOXRING-type zinc-finger

mel:Metbo_0299 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mew:MSWAN_2130 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mfv:Mfer_0241 pf:HVO_2753_ZBP pf:A2L_zn_ribbon pf:YjdM_Zn_Ribbon pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C pf:MCM_C


meth:MBMB1_1775 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mmg:MTBMA_c16060 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mig:Metig_0531 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:DUF5741

mok:Metok_0562 pf:DNA_ligase_A_M pf:RNA_ligase pf:RAP pf:Lig_C pf:DUF3801

mzh:Mzhil_0017 pf:HTH_17 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mmp:MMP0376 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:FANCI_S2

mmd:GYY_01940 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:FANCI_S2

mmq:MmarC5_1262 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mmx:MmarC6_0534 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:FANCI_S2

mmz:MmarC7_1374 pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF1617 pf:Lig_C pf:FANCI_S2

mae:Maeo_0656 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mev:Metev_0019 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mja:MJ_0414 pf:DNA_ligase_A_M pf:RNA_ligase pf:G1_gp67_C pf:Lig_C

mfe:Mefer_1305 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mfs:MFS40622_1683 pf:MapZ_EC1 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mba:Mbar_A0970 pf:Pesticin_RB pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mvn:Mevan_1364 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mvu:Metvu_0821 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mma:MM_1307 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mmaz:MmTuc01_1355 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

ave:Arcve_1477 pf:DNA_ligase_A_M pf:RNA_ligase pf:RNA_lig_T4_1 pf:Lig_C


mif:Metin_0052 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

apo:Arcpr_1305 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:DUF5009

mpy:Mpsy_1786 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mtp:Mthe_0300 pf:RNA_ligase pf:Lig_C

mmh:Mmah_0013 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

hti:HTIA_1598 pf:RNA_ligase pf:Lig_C

hut:Huta_1442 pf:RNA_ligase pf:Lig_C

hxa:Halxa_4078 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

hma:rrnAC2266 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mbu:Mbur_1758 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C


mhz:Metho_2423 pf:RNA_ligase pf:DNA_ligase_A_M pf:RNA_lig_T4_1 pf:Lig_C

ast:Asulf_02177 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

hbo:Hbor_30630 pf:RNA_ligase pf:Lig_C

mcj:MCON_2015 pf:LysM pf:RNA_ligase pf:Lig_C

fpl:Ferp_1330 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:COG7

nou:Natoc_2587 pf:RNA_ligase pf:Lig_C

mhi:Mhar_0357 pf:RNA_ligase pf:Lig_C

nmg:Nmag_1102 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

npe:Natpe_1716 pf:RNA_ligase pf:Lig_C

mka:MK0528 pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

htu:Htur_2520 pf:RNA_ligase pf:Lig_C

nat:NJ7G_1163 pf:RNA_ligase pf:Lig_C

hbu:Hbut_1550 pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C pf:Oxidored_nitro

pfm:Pyrfu_1465 pf:Rv2175c_wHTH pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C pf:Radical_SAM pf:Bacteriocin_IIi

iho:Igni_1251 pf:DNA_ligase_A_M pf:RNA_ligase pf:Chlor_dismutase pf:Lig_C pf:RraB

ffo:FFONT_1246 pf:UPF0175 pf:DNA_ligase_A_M pf:RNA_ligase pf:BRCT pf:Lig_C

ape:APE_1567.1 pf:RNA_ligase pf:Lig_C

tlt:OCC_08874 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

acj:ACAM_0981 pf:RNA_ligase pf:Lig_C

smr:Smar_1436 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

shc:Shell_1013 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

tba:TERMP_00178 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:RNA_lig_T4_1 pf:ArdA pf:Lig_C

tsi:TSIB_1335 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:RNA_lig_T4_1 pf:Lig_C

pya:PYCH_15530 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:SepSecS pf:Lig_C

pys:Py04_0546 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

ton:TON_0064 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

tko:TK1545 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

the:GQS_04900 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

tga:TGAM_2005 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:DUF3303 pf:Lig_C

thm:CL1_0630 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

tha:TAM4_12 pf:GrlR pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C pf:DUF3386

pab:PAB1020 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:SpoIIAA-like pf:Lig_C pf:PSP1

pyn:PNA2_1142 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:SpoIIAA-like pf:Lig_C

pfi:PFC_01005 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

pfu:PF0353 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

pho:PH0498 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:DUF1128 pf:SpoIIAA-like pf:Lig_C

trd:THERU_01860 pf:DNA_ligase_A_M pf:RNA_ligase pf:Ribosomal_S17e pf:Lig_C

tal:Thal_0814 pf:DNA_ligase_A_M pf:DNA_ligase_aden pf:RNA_ligase pf:Lig_C

hte:Hydth_1300 pf:DNA_ligase_A_M pf:RNA_ligase pf:Ribosomal_L7Ae pf:Lig_C

hth:HTH_1308 pf:DNA_ligase_A_M pf:RNA_ligase pf:Ribosomal_L7Ae pf:Lig_C

top:TOPB45_0977 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

noc:Noc_1413 pf:RNA_ligase pf:fvmRadSAM-pep pf:Lig_C

aae:aq_1106 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C pf:APG6_N pf:FecR_C

nhl:Nhal_1642 pf:RNA_ligase pf:Lig_C

tid:Thein_0777 pf:RNA_ligase pf:Lig_C pf:Heme_oxygenase pf:FtsX_ECD

hha:Hhal_0982 pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

min:Minf_0008 pf:RNA_ligase pf:GFO_IDH_MocA_C2 pf:Lig_C

aeh:Mlg_2553 pf:RNA_ligase pf:Lig_C

tni:TVNIR_2892 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

tkm:TK90_1908 pf:DNA_ligase_A_M pf:RNA_ligase pf:ComFB pf:Lig_C

aqu:100641772 pf:RNA_ligase pf:Syncollin

csb:CLSA_c31360 pf:tRNA-synt_His pf:tRNA-synt_2b pf:RhoGAP

ame:725786 pf:ubiquitin pf:NIF

csr:Cspa_c22080 pf:Condensation pf:AMP-binding pf:AMP-binding_C pf:PP-binding pf:Condensation pf:Transferase pf:AMP-binding pf:DDE_Tnp_1 pf:AMP-binding_C pf:PP-binding pf:Epimerase pf:RmlD_sub_bind pf:NAD_binding_4 pf:RNA_bind

rae:G148_0891 pf:LpxB pf:DUF354 pf:KorB pf:RecG_N

rai:RA0C_0964 pf:LpxB pf:DUF354 pf:KorB pf:RecG_N

ran:Riean_0727 pf:LpxB pf:DUF354 pf:KorB pf:RecG_N

rar:RIA_1518 pf:LpxB pf:DUF354 pf:KorB pf:RecG_N

dda:Dd703_3690 pf:RNA_ligase

pdi:BDI_3413 pf:HAD_2 pf:Hydrolase pf:Hydrolase_like

phd:102320469 pf:UPF0004 pf:Radical_SAM pf:Amdase pf:TRAM

fab:101815453 pf:RhoGEF pf:PH pf:IQ_SEC7_PH pf:PH_13 pf:Mcp5_PH pf:FYVE pf:FYVE_2 pf:zf-RING_UBOX pf:zf-RING_5 pf:PH

msi:Msm_0645 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

gan:UMN179_00448 pf:UPF0004 pf:B12-binding pf:Lipase_GDSL pf:Radical_SAM pf:TRAM pf:TRAM_2