Search common motifs in selected sequences


  
Motifs : pf:ALIX_LYPXL_bndALIX V-shaped domain binding to HIV
 pf:Apo-VLDL-IIApovitellenin I (Apo-VLDL-II)
 pf:Arc_PepCArchaeal Peptidase A24 C-terminal Domain
 pf:Arginosuc_synthArginosuccinate synthase
 pf:Baculo_PEP_CBaculovirus polyhedron envelope protein, PEP, C terminus
 pf:CDC37_CCdc37 C terminal domain
 pf:Chromo_2
 pf:CysG_dimeriserSirohaem synthase dimerisation region
 pf:DCD2'-deoxycytidine 5'-triphosphate deaminase (DCD)
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_A_NDNA ligase N terminus
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DUF1548Domain of Unknown Function (DUF1548)
 pf:DUF1955Domain of unknown function (DUF1955)
 pf:DUF2071Uncharacterized conserved protein (COG2071)
 pf:DUF2850Protein of unknown function (DUF2850)
 pf:DUF4294Domain of unknown function (DUF4294)
 pf:DUF4881Domain of unknown function (DUF4881)
 pf:DUF502Protein of unknown function (DUF502)
 pf:DUF5062Domain of unknown function (DUF5062)
 pf:DUF5695
 pf:FeS_assembly_P
 pf:FecR_C
 pf:GntRBacterial regulatory proteins, gntR family
 pf:HADhaloacid dehalogenase-like hydrolase
 pf:IMS_CimpB/mucB/samB family C-terminal domain
 pf:L27_2L27_2
 pf:MTTBTrimethylamine methyltransferase (MTTB)
 pf:Methyltransf_8Hypothetical methyltransferase
 pf:PIG-LGlcNAc-PI de-N-acetylase
 pf:Phage_CP76Phage regulatory protein CII (CP76)
 pf:Phage_min_cap2Phage minor capsid protein 2
 pf:PilJ_C
 pf:PlyCA_N
 pf:Polysacc_synt_2Polysaccharide biosynthesis protein
 pf:RNA_ligaseRNA ligase
 pf:RRF_GIRibosome recycling factor
 pf:TPR_1Tetratricopeptide repeat
 pf:Tcp10_CT-complex protein 10 C-terminus
 pf:Tex55
 pf:VBSVinculin Binding Site
 pf:VP40Matrix protein VP40
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

mvu:Metvu_1663 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mfs:MFS40622_0101 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF2071 pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mjh:JH146_1630 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF2071 pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mja:MJ_0171 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF2071 pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mfe:Mefer_0746 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF2071 pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mif:Metin_0801 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:ALIX_LYPXL_bnd pf:DNA_ligase_A_C

mig:Metig_0316 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mok:Metok_1276 pf:DNA_ligase_A_N pf:DUF1548 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmq:MmarC5_0793 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:Arc_PepC

mmz:MmarC7_0215 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:Arc_PepC

mmak:MMKA1_11260 pf:DNA_ligase_A_N pf:L27_2 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:Arc_PepC

mmao:MMOS7_10620 pf:DNA_ligase_A_N pf:L27_2 pf:DUF5062 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:Arc_PepC

mmp:MMP0970 pf:DNA_ligase_A_N pf:L27_2 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:Arc_PepC

mmd:GYY_05675 pf:DNA_ligase_A_N pf:L27_2 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:Arc_PepC

mmx:MmarC6_1685 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mvn:Mevan_0293 pf:DNA_ligase_A_N pf:Apo-VLDL-II pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:Arc_PepC

mae:Maeo_0864 pf:DNA_ligase_A_N pf:DUF1548 pf:DNA_ligase_A_M pf:RNA_ligase pf:RRF_GI pf:DUF4881 pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mvo:Mvol_0195 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

tsi:TSIB_0885 pf:DNA_ligase_A_N pf:FeS_assembly_P pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

tlt:OCC_10130 pf:DNA_ligase_A_N pf:FeS_assembly_P pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:TPR_1 pf:DNA_ligase_A_C

ths:TES1_1910 pf:DNA_ligase_A_N pf:PlyCA_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:PilJ_C pf:DNA_ligase_A_C

tba:TERMP_01956 pf:DNA_ligase_A_N pf:PlyCA_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:DNA_ligase_A_C

ppac:PAP_00300 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

pab:PAB2002 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Methyltransf_8 pf:TPR_1 pf:DNA_ligase_A_C

pho:PH1622 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:DNA_ligase_A_C

tga:TGAM_1718 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:TPR_1 pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

tnu:BD01_1570 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:TPR_1 pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

pyn:PNA2_0205 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

pys:Py04_1516 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:TPR_1 pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

teu:TEU_01440 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:TPR_1 pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

pfi:PFC_10430 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:DNA_ligase_A_C

pfu:PF1635 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:DNA_ligase_A_C

tha:TAM4_1751 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:TPR_1 pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

the:GQS_07890 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:TPR_1 pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

pya:PYCH_03680 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:DNA_ligase_A_C

thm:CL1_1197 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

tko:TK2140 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:TPR_1 pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

ton:TON_1515 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Tcp10_C pf:TPR_1 pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mka:MK0999 pf:DNA_ligase_A_N pf:GntR pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

fpl:Ferp_0025 pf:DNA_ligase_A_N pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

mfv:Mfer_0505 pf:DNA_ligase_A_N pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF5695 pf:DNA_ligase_A_C

ave:Arcve_0580 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mfi:DSM1535_1543 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

apo:Arcpr_0546 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:PIG-L pf:DNA_ligase_A_N pf:CDC37_C pf:DNA_ligase_A_C

afg:AFULGI_00007030 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

afu:AF_0623 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

gah:GAH_00141 pf:DNA_ligase_A_N pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mfc:BRM9_2137 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mel:Metbo_2463 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mzh:Mzhil_0867 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:FecR_C pf:DNA_ligase_A_C

meth:MBMB1_0159 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mev:Metev_0890 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:Tex55

mru:mru_0445 pf:DNA_ligase_A_N pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Polysacc_synt_2 pf:DNA_ligase_A_C

mew:MSWAN_0175 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

neq:NEQ509 pf:DNA_ligase_A_N pf:DUF4294 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

gac:GACE_1561 pf:DCD pf:DNA_ligase_A_N pf:DNA_ligase_A_N pf:IMS_C pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mmet:MCMEM_1588 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

msi:Msm_0645 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

arg:QT11_C0001G0107 pf:DNA_ligase_A_N pf:Phage_CP76 pf:DUF1955 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mbu:Mbur_1088 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C


ast:Asulf_01636 pf:DNA_ligase_A_N pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mpy:Mpsy_0817 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

metc:MTCT_1436 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmg:MTBMA_c01660 pf:DNA_ligase_A_N pf:DUF502 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mhz:Metho_1681 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmh:Mmah_0567 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mez:Mtc_2230 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mtp:Mthe_0844 pf:DNA_ligase_A_N pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mpi:Mpet_2400 pf:DNA_ligase_A_N pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mem:Memar_1865 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mpd:MCP_0613 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C pf:Arginosuc_synth

msw:MSSIT_2768 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

msz:MSSIH_2734 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

msj:MSSAC_3087 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C


meb:Abm4_0234 pf:DNA_ligase_A_N pf:Baculo_PEP_C pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:Arc_PepC pf:Chromo_2

mef:MSWH1_1448 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

meq:MSWHS_1883 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mst:Msp_0258 pf:DNA_ligase_A_N pf:Phage_min_cap2 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mthe:MSTHC_2356 pf:DNA_ligase_A_N pf:HAD pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mthr:MSTHT_0950 pf:DNA_ligase_A_N pf:HAD pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mhor:MSHOH_2566 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:VP40

mhi:Mhar_1487 pf:DNA_ligase_A_N pf:DNA_ligase_A_N pf:VBS pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mls:MSLAZ_0929 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mcj:MCON_0798 pf:DNA_ligase_A_N pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

rci:RRC227 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Arginosuc_synth

mbar:MSBR2_1391 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mby:MSBRM_1019 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mvc:MSVAZ_2465 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mek:MSKOL_2483 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

metm:MSMTP_0783 pf:DNA_ligase_A_N pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mba:Mbar_A1899 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbw:MSBRW_2836 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mfo:Metfor_0603 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mma:MM_2714 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:VP40

mbg:BN140_0526 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:CysG_dimeriser pf:DNA_ligase_A_C

mla:Mlab_0620 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:MTTB pf:DNA_ligase_A_C

mbn:Mboo_2156 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mhu:Mhun_2882 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DUF2850 pf:RNA_ligase pf:DNA_ligase_A_C

hdl:HALDL1_08665 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C