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| Motifs : | pf:5_3_exonuc | 5'-3' exonuclease, C-terminal SAM fold
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| | pf:5_3_exonuc_N | 5'-3' exonuclease, N-terminal resolvase-like domain
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| | pf:AAA | ATPase family associated with various cellular activities (AAA)
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| | pf:AAA_14 | AAA domain
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| | pf:AAA_16 | AAA ATPase domain
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| | pf:AAA_22 | AAA domain
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| | pf:AAA_23 | AAA domain
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| | pf:AAA_25 | AAA domain
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| | pf:AAA_30 | AAA domain
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| | pf:AAA_5 | AAA domain (dynein-related subfamily)
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| | pf:AAA_6 | Hydrolytic ATP binding site of dynein motor region D1
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| | pf:AAA_7 | P-loop containing dynein motor region D3
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| | pf:AAA_8 | P-loop containing dynein motor region D4
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| | pf:AAA_9 | ATP-binding dynein motor region D5
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| | pf:AAA_lid_1 | |
| | pf:AAA_lid_11 | |
| | pf:ABC1 | ABC1 family
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| | pf:ADH_N_2 | N-terminal domain of oxidoreductase
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| | pf:ADH_zinc_N | Zinc-binding dehydrogenase
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| | pf:ADH_zinc_N_2 | Zinc-binding dehydrogenase
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| | pf:APH | Phosphotransferase enzyme family
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| | pf:ATPase | KaiC
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| | pf:Aldedh | Aldehyde dehydrogenase family
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| | pf:Aminotran_4 | Amino-transferase class IV
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| | pf:Ank | Ankyrin repeat
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| | pf:Ank_2 | Ankyrin repeats (3 copies)
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| | pf:Ank_3 | Ankyrin repeat
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| | pf:Ank_4 | Ankyrin repeats (many copies)
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| | pf:Ank_5 | Ankyrin repeats (many copies)
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| | pf:Asp_protease | Aspartyl protease
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| | pf:Asp_protease_2 | Aspartyl protease
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| | pf:Beta-lactamase | Beta-lactamase
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| | pf:Beta-lactamase2 | Beta-lactamase enzyme family
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| | pf:CCDC168_N | Coiled-coil domain-containing protein 168
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| | pf:COG5_N | |
| | pf:Caps_syn_GfcC_N | |
| | pf:CarD_TRCF_RID | |
| | pf:Cna_B | Cna protein B-type domain
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| | pf:Com_YlbF | Control of competence regulator ComK, YlbF/YmcA
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| | pf:DALR_2 | DALR domain
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| | pf:DEAD | DEAD/DEAH box helicase
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| | pf:DHC_N2 | Dynein heavy chain, N-terminal region 2
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| | pf:DNA_pol_A | DNA polymerase family A
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| | pf:DNA_pol_A_exo1 | 3'-5' exonuclease
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| | pf:DUF1487 | Protein of unknown function (DUF1487)
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| | pf:DUF3340 | C-terminal domain of tail specific protease (DUF3340)
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| | pf:DUF4168 | Domain of unknown function (DUF4168)
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| | pf:DUF5365 | |
| | pf:DUF5446 | |
| | pf:DUF6036 | |
| | pf:DUF6673 | |
| | pf:Dynein_AAA_lid | |
| | pf:Dynein_C | |
| | pf:Dynein_heavy | Dynein heavy chain and region D6 of dynein motor
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| | pf:EF-hand_1 | EF hand
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| | pf:EF-hand_10 | EF hand
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| | pf:EF-hand_4 | Cytoskeletal-regulatory complex EF hand
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| | pf:EF-hand_5 | EF hand
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| | pf:EF-hand_6 | EF-hand domain
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| | pf:EF-hand_7 | EF-hand domain pair
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| | pf:EF-hand_8 | EF-hand domain pair
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| | pf:EFG_C | Elongation factor G C-terminus
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| | pf:EFG_III | |
| | pf:EPSP_synthase | EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
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| | pf:ERCC4 | ERCC4 domain
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| | pf:EphA2_TM | Ephrin type-A receptor 2 transmembrane domain
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| | pf:FG-GAP | FG-GAP repeat
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| | pf:FG-GAP_3 | |
| | pf:FctA | Spy0128-like isopeptide containing domain
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| | pf:GTP_EFTU | Elongation factor Tu GTP binding domain
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| | pf:GTP_EFTU_D2 | Elongation factor Tu domain 2
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| | pf:Glucosaminidase | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
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| | pf:Glyco_transf_43 | Glycosyltransferase family 43
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| | pf:GramPos_pilinD3 | Gram-positive pilin backbone subunit 3, Cna-B-like domain
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| | pf:Gram_pos_anchor | Gram positive anchor
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| | pf:HARE-HTH | HB1, ASXL, restriction endonuclease HTH domain
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| | pf:Helicase_C | Helicase conserved C-terminal domain
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| | pf:INV_N | |
| | pf:Integrase_H2C2 | |
| | pf:IstB_IS21 | IstB-like ATP binding protein
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| | pf:KASH_CCD | Coiled-coil region of CCDC155 or KASH
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| | pf:Kinase-like | Kinase-like
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| | pf:LRRNT_2 | Leucine rich repeat N-terminal domain
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| | pf:LRR_1 | Leucine Rich Repeat
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| | pf:LRR_4 | Leucine Rich repeats (2 copies)
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| | pf:LRR_5 | Leucine rich repeats (6 copies)
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| | pf:LRR_6 | Leucine Rich repeat
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| | pf:LRR_8 | Leucine rich repeat
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| | pf:LepA_C | GTP-binding protein LepA C-terminus
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| | pf:LuxC | Acyl-CoA reductase (LuxC)
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| | pf:MEKK4_N | |
| | pf:MMR_HSR1 | 50S ribosome-binding GTPase
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| | pf:MMR_HSR1_Xtn | C-terminal region of MMR_HSR1 domain
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| | pf:MT | Microtubule-binding stalk of dynein motor
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| | pf:Molybdop_Fe4S4 | Molybdopterin oxidoreductase Fe4S4 domain
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| | pf:Molybdopterin | Molybdopterin oxidoreductase
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| | pf:Molydop_binding | Molydopterin dinucleotide binding domain
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| | pf:Mrr_cat | Restriction endonuclease
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| | pf:Na_K-ATPase | Sodium / potassium ATPase beta chain
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| | pf:Nitr_red_alph_N | Respiratory nitrate reductase alpha N-terminal
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| | pf:NopRA1 | Nucleolar pre-ribosomal-associated protein 1
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| | pf:Npa1 | Ribosome 60S biogenesis N-terminal
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| | pf:OAM_dimer | Dimerisation domain of d-ornithine 4,5-aminomutase
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| | pf:PBP5_C | Penicillin-binding protein 5, C-terminal domain
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| | pf:PDZ | PDZ domain (Also known as DHR or GLGF)
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| | pf:PK_Tyr_Ser-Thr | |
| | pf:PRY | SPRY-associated domain
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| | pf:Peptidase_S11 | D-alanyl-D-alanine carboxypeptidase
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| | pf:Peptidase_S41 | Peptidase family S41
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| | pf:Pkinase | Protein kinase domain
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| | pf:RF3_C | Class II release factor RF3, C-terminal domain
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| | pf:RT_RNaseH | |
| | pf:RT_RNaseH_2 | |
| | pf:RVP_2 | Retroviral aspartyl protease
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| | pf:RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase)
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| | pf:Ras | Ras family
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| | pf:Rce1-like | |
| | pf:RecG_dom3_C | |
| | pf:ResIII | Type III restriction enzyme, res subunit
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| | pf:RsgA_GTPase | |
| | pf:SF3a60_Prp9_C | |
| | pf:SPARC_Ca_bdg | Secreted protein acidic and rich in cysteine Ca binding region
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| | pf:SPRY | SPRY domain
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| | pf:SRPRB | Signal recognition particle receptor beta subunit
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| | pf:SUFBD | |
| | pf:Seadorna_VP7 | Seadornavirus VP7
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| | pf:Sec8_N | |
| | pf:Sgf11_N | |
| | pf:Sina_RING | |
| | pf:SufBD_N | |
| | pf:Sulfotransfer_4 | |
| | pf:TMEM61 | TMEM61 protein family
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| | pf:TMEM89 | TMEM89 protein family
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| | pf:TPR_1 | Tetratricopeptide repeat
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| | pf:TPR_11 | TPR repeat
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| | pf:TPR_12 | Tetratricopeptide repeat
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| | pf:TPR_14 | Tetratricopeptide repeat
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| | pf:TPR_16 | Tetratricopeptide repeat
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| | pf:TPR_17 | Tetratricopeptide repeat
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| | pf:TPR_19 | Tetratricopeptide repeat
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| | pf:TPR_2 | Tetratricopeptide repeat
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| | pf:TPR_6 | Tetratricopeptide repeat
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| | pf:TPR_8 | Tetratricopeptide repeat
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| | pf:TPR_9 | Tetratricopeptide repeat
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| | pf:TRAF3_RING | |
| | pf:TRCF | TRCF domain
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| | pf:TSP_NTD | |
| | pf:TTC3_DZIP3_dom | |
| | pf:Troponin | Troponin
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| | pf:UB2H | Bifunctional transglycosylase second domain
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| | pf:Ubiquitin_2 | Ubiquitin-like domain
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| | pf:UnbV_ASPIC | ASPIC and UnbV
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| | pf:UvrB_inter | |
| | pf:ZW10_C | |
| | pf:Zw10_N | |
| | pf:Zw10_middle | |
| | pf:cwf21 | cwf21 domain
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| | pf:gag-asp_proteas | gag-polyprotein putative aspartyl protease
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| | pf:rve | Integrase core domain
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| | pf:rve_3 | Integrase core domain
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| | pf:tRNA-synt_1 | tRNA synthetases class I (I, L, M and V)
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| | pf:tRNA-synt_1e | tRNA synthetases class I (C) catalytic domain
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| | pf:tRNA-synt_1f | tRNA synthetases class I (K)
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| | pf:tRNA-synt_1g | tRNA synthetases class I (M)
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| | pf:zf-ANAPC11 | Anaphase-promoting complex subunit 11 RING-H2 finger
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| | pf:zf-B_box | B-box zinc finger
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| | pf:zf-C3HC4 | Zinc finger, C3HC4 type (RING finger)
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| | pf:zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger)
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| | pf:zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger)
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| | pf:zf-C3HC4_4 | zinc finger of C3HC4-type, RING
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| | pf:zf-CCHC | Zinc knuckle
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| | pf:zf-H2C2 | His(2)-Cys(2) zinc finger
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| | pf:zf-HC5HC2H | PHD-like zinc-binding domain
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| | pf:zf-Nse | Zinc-finger of the MIZ type in Nse subunit
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| | pf:zf-RING_11 | RING-like zinc finger
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| | pf:zf-RING_2 | Ring finger domain
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| | pf:zf-RING_5 | zinc-RING finger domain
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| | pf:zf-RING_6 | zf-RING of BARD1-type protein
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| | pf:zf-RING_UBOX | RING-type zinc-finger
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| | pf:zf-rbx1 | RING-H2 zinc finger domain
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