Search common motifs in selected sequences


  
Motifs : pf:2_5_RNA_ligase22'-5' RNA ligase superfamily
 pf:Ala_racemase_NAlanine racemase, N-terminal domain
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_A_NDNA ligase N terminus
 pf:DUF2332Uncharacterized protein conserved in bacteria (DUF2332)
 pf:DUF4262Domain of unknown function (DUF4262)
 pf:DUF5427
 pf:DUF6412
 pf:IcmF_CType VI secretion protein IcmF C-terminal
 pf:PXPX domain
 pf:RNA_ligaseRNA ligase
 pf:Se-cys_synth_NSelenocysteine synthase N terminal
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

phl:KKY_3148 pf:DNA_ligase_A_N pf:DUF5427 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

deq:XM25_14575 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

cse:Cseg_4093 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

abq:ABAZ39_05835 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ccr:CC_3610 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ccs:CCNA_03725 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

abs:AZOBR_140226 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

azl:AZL_003120 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

chq:AQ619_17410 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

bop:AXW83_25820 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:PX pf:DNA_ligase_A_C

rbm:TEF_01285 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ali:AZOLI_0133 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cak:Caul_4898 pf:DNA_ligase_A_N pf:DUF6412 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pbr:PB2503_01927 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

hoe:IMCC20628_03619 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ahu:A6A40_00500 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ati:AL072_02840 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

met:M446_0628 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

chel:AL346_05795 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rce:RC1_0647 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

maqu:Maq22A_c03515 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

xau:Xaut_1470 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mno:Mnod_1541 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rhz:RHPLAN_64340 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mlo:mll5481 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

oca:OCAR_5172 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ocg:OCA5_c27960 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

oco:OCA4_c27950 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

acr:Acry_1611 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pphr:APZ00_00300 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

brs:S23_66790 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mci:Mesci_0075 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

amv:ACMV_16560 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pgv:SL003B_3229 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

nha:Nham_0553 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

azc:AZC_0393 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

brc:BCCGELA001_33925 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mop:Mesop_0077 pf:DNA_ligase_A_N pf:DUF4262 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sno:Snov_0068 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mes:Meso_0032 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mam:Mesau_00078 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

bne:DA69_04730 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pzu:PHZ_c3347 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

aak:AA2016_5337 pf:DNA_ligase_A_N pf:IcmF_C pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mrd:Mrad2831_3691 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mpo:Mpop_3432 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ngg:RG540_CH07220 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

bjp:RN69_05735 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

bju:BJ6T_11730 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

lap:ACP90_21565 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mor:MOC_4216 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ngl:RG1141_CH07080 pf:DNA_ligase_A_N pf:Se-cys_synth_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

ata:AWN88_23820 pf:DNA_ligase_A_N pf:Se-cys_synth_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pgd:Gal_03773 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rir:BN877_I0823 pf:DNA_ligase_A_N pf:Se-cys_synth_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rtr:RTCIAT899_CH05080 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ara:Arad_1382 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

shz:shn_05045 pf:DNA_ligase_A_N pf:Se-cys_synth_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

atf:Ach5_07590 pf:DNA_ligase_A_N pf:Se-cys_synth_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ssan:NX02_23555 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

aua:M673_09030 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DUF2332 pf:DNA_ligase_A_C

agr:AGROH133_04577 pf:DNA_ligase_A_N pf:Se-cys_synth_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

bid:Bind_1071 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

brd:JL11_13945 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rpe:RPE_0725 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pga:PGA1_262p00500 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rpc:RPC_0751 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

rga:RGR602_CH01084 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ops:A8A54_15370 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cbot:ATE48_03150 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rel:REMIM1_CH01168 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rhl:LPU83_1133 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mch:Mchl_3561 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ret:RHE_CH01164 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

atu:Atu0840 pf:DNA_ligase_A_N pf:Se-cys_synth_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

brg:A4249_04125 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cid:P73_4151 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

nwi:Nwi_0462 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

avi:Avi_6007 pf:DNA_ligase_A_N pf:Se-cys_synth_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

bsb:Bresu_2256 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pgl:PGA2_239p0500 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mdi:METDI4026 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rhn:AMJ98_CH01204 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sphm:G432_05335 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rei:IE4771_CH01233 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mex:Mext_3237 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rpx:Rpdx1_0962 pf:Ala_racemase_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

nar:Saro_0068 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

gbc:GbCGDNIH3_0904 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

pde:Pden_0412 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rep:IE4803_CH01191 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rlg:Rleg_0915 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

syb:TZ53_19125 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pami:JCM7686_pAMI4p364 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

lha:LHA_1491 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

sjp:SJA_C1-17220 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

gbe:GbCGDNIH1_0904 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:2_5_RNA_ligase2 pf:DNA_ligase_A_C

gbh:GbCGDNIH2_0904 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:2_5_RNA_ligase2 pf:DNA_ligase_A_C

gbs:GbCGDNIH4_0904 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:2_5_RNA_ligase2 pf:DNA_ligase_A_C

rlb:RLEG3_15010 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

oah:DR92_4210 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C