Search common motifs in selected sequences


  
Motifs : pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DNA_primase_SDNA primase small subunit
 pf:DUF5415
 pf:DUF5655
 pf:DUF5959
 pf:FAD-oxidase_CFAD linked oxidases, C-terminal domain
 pf:GH3GH3 auxin-responsive promoter
 pf:GPAT_C
 pf:GlypicanGlypican
 pf:HCV_NS5a_1aHepatitis C virus non-structural 5a zinc finger domain
 pf:LigD_NDNA polymerase Ligase (LigD)
 pf:LigD_Prim-Pol
 pf:MeninMenin
 pf:MucinMucin-like glycoprotein
 pf:RNA_ligaseRNA ligase
 pf:Rng_hyd_C
 pf:TropomodulinTropomodulin
 pf:UvrA_inter
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

reh:H16_B2393 pf:DNA_ligase_A_M

rpj:N234_31565 pf:DNA_ligase_A_M

cnc:CNE_1c12130 pf:DNA_ligase_A_M

fgi:OP10G_3151 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

geb:GM18_0111 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

vma:VAB18032_06515 pf:DNA_ligase_A_M pf:DUF5415 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

ank:AnaeK_0832 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

acp:A2cp1_0836 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

brad:BF49_3749 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

smeg:C770_GR4Chr2406 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

mam:Mesau_02902 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pep:AQ505_12975 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

rpd:RPD_2161 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

rpt:Rpal_2316 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

gur:Gura_3452 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

llu:AKJ09_05332 pf:DNA_ligase_A_M pf:UvrA_inter pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

baco:OXB_3302 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cpi:Cpin_3242 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mlo:mll4606 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pgm:PGRAT_14595 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

del:DelCs14_2489 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

dac:Daci_4339 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

lpil:LIP_2515 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

bcew:DM40_5175 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Menin pf:LigD_Prim-Pol pf:DNA_primase_S

ccro:CMC5_051300 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

ddl:Desdi_2684 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

dor:Desor_2615 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

sno:Snov_0819 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

psim:KR76_09220 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

saq:Sare_4352 pf:DNA_ligase_A_M pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

nwi:Nwi_0353 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

stp:Strop_3968 pf:DNA_ligase_A_M pf:DUF5415 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

psyr:N018_16280 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

chu:CHU_2837 pf:LigD_N pf:Tropomodulin pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:Glypican pf:Mucin pf:LigD_Prim-Pol pf:DNA_primase_S

bced:DM42_7098 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bceo:I35_7581 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bdl:AK34_5177 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cbw:RR42_m1699 pf:DNA_ligase_A_M

cpy:Cphy_1729 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

sgy:Sgly_0962 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bcen:DM39_7047 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ccel:CCDG5_0620 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mci:Mesci_0783 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

psw:LK03_18305 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rhz:RHPLAN_36380 pf:DNA_ligase_A_M

bcm:Bcenmc03_6073 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ele:Elen_1951 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

mcj:MCON_3253 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

mop:Mesop_0815 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

scl:sce3523 pf:HCV_NS5a_1a pf:DNA_ligase_A_M pf:RNA_ligase pf:Rng_hyd_C pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

smi:BN406_05994 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

aaa:Acav_2693 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

aav:Aave_2519 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bch:Bcen2424_6483 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bcn:Bcen_1346 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

nmv:NITMOv2_2657 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S pf:FAD-oxidase_C

ote:Oter_4309 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

pst:PSPTO_3464 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

smer:DU99_30115 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

smk:Sinme_5055 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

smx:SM11_pD0933 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ade:Adeh_0784 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bph:Bphy_7582 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

vaa:AX767_14310 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bne:DA69_04445 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cih:ATE47_01435 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

fla:SY85_09220 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DUF5655 pf:LigD_Prim-Pol pf:DNA_primase_S

psea:WY02_17950 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

aza:AZKH_2968 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

bop:AXW83_17900 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mes:Meso_1150 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

sme:SM_b21044 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

smel:SM2011_b21044 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

smq:SinmeB_4042 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bcon:NL30_32850 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

gem:GM21_0109 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

hoh:Hoch_3330 pf:LigD_N pf:DNA_ligase_A_M pf:GPAT_C pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mil:ML5_0458 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

nko:Niako_4922 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol

scu:SCE1572_21330 pf:DNA_ligase_A_M pf:Rng_hyd_C pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

gbm:Gbem_0128 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

paen:P40081_15495 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

pecq:AD017_11835 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

psee:FRP1_24830 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

pseq:AD006_04015 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

asl:Aeqsu_3115 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

bac:BamMC406_6340 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pnl:PNK_2195 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S pf:GH3

sfd:USDA257_c15160 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bug:BC1001_1764 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bja:blr5182 pf:DNA_ligase_A_M pf:RNA_ligase

ddh:Desde_0514 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

dhd:Dhaf_0568 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

dsy:DSY0616 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

gah:GAH_01512 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

ica:Intca_0626 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

swo:Swol_1123 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

bmul:NP80_5544 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cfl:Cfla_1903 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

rsp:RSP_2679 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

sfh:SFHH103_05184 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DUF5959 pf:DNA_primase_S