Search common motifs in selected sequences


  
Motifs : pf:Astro_capsid_pTurkey astrovirus capsid protein
 pf:T4SS-DNA_transfType IV secretory system Conjugative DNA transfer
 pf:TraG-D_CTraM recognition site of TraD and TraG
 pf:TrwB_AAD_bindType IV secretion-system coupling protein DNA-binding domain

rri:A1G_02240 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rra:RPO_02220 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rrb:RPN_04690 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rrc:RPL_02210 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rrh:RPM_02200 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rrj:RrIowa_0470 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rrm:RRM_02150 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rrn:RPJ_02200 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rrr:RRR_02135 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rph:RSA_02165 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rrp:RPK_04245 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rhe:Rh054_02250 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rja:RJP_0312 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rpk:RPR_04275 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rco:RC0391 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rsv:Rsl_462 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rsw:MC3_02245 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

raf:RAF_ORF0365 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rmi:RMB_06130 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rpp:MC1_02205 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rms:RMA_0402 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rre:MCC_02795 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rkt:FLA4_07940 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rmo:MCI_06155 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rfe:RF_0469 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rtl:H6P87_00404 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rmc:RMONA_07970 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rak:A1C_02075 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

ras:RAS_08930 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rab:AL573_02550 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

ram:MCE_02765 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rau:MC5_06000 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rcc:RCA_03805 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rcm:A1E_04160 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rtb:RTB9991CWPP_01385 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rtt:RTTH1527_01380 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rty:RT0284 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rpg:MA5_02790 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rpl:H375_3230 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rpn:H374_7910 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rpo:MA1_01420 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rpq:rpr22_CDS287 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rpr:RP293 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rps:M9Y_01430 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rpv:MA7_01420 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rpw:M9W_01425 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rpz:MA3_01440 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rbo:A1I_02285 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rbe:RBE_1018 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

ric:BA173_06145 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

menm:LF888_05830 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

ott:OTT_1567 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

ots:OTBS_0007 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

ptc:phytr_9400 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

rbt:NOVO_03380 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wek:M1L26_000432 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wex:M1L25_000712 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wpp:DEJ70_04570 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wee:LOK48_01280 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wem:CAI20_03760 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

ssiv:MJ631_03695 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wes:JKF54_05545 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wpi:WP1259 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wep:JSQ73_006590 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wdm:EJB00_02350 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wend:M3L71_04050 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wet:GOY13_02520 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wed:wNo_10760 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wef:GOY12_02270 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

weu:GOY14_01300 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

woo:wOo_07230 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wel:GOY07_01565 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wbm:Wbm0283 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

web:WBP_0557 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C pf:Astro_capsid_p

ren:EF513_03790 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wea:EA652_0009 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

welo:NMD99_03165 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wri:WRi_000090 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

weq:NHG98_00045 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wcl:WCLE_00090 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wev:ONI09_00045 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wec:wCauA_02895 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wej:L2227_06905 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wen:wHa_00080 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C pf:Astro_capsid_p

wew:HUB92_02130 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

weg:L0Z57_00045 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wer:wSan_00080 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wey:wYak_00080 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wezt:R0F63_03410 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wol:WD_0008 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

weo:ASM33_01290 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

wedc:R0F62_00770 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

weh:J4T77_00045 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

eaa:I862_04765 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

nmik:LUA81_02045 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

ech:ECH_0040 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

echa:ECHHL_1017 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

echj:ECHJAX_1037 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

echl:ECHLIB_1037 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

echp:ECHWP_1011 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C

echs:ECHOSC_1032 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C