Search common motifs in selected sequences


  
Motifs : pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DNA_primase_SDNA primase small subunit
 pf:DUF1999Protein of unknown function (DUF1999)
 pf:DUF4434Domain of unknown function (DUF4434)
 pf:DUF5415
 pf:DUF6643
 pf:DUF6866_C
 pf:LigD_NDNA polymerase Ligase (LigD)
 pf:LigD_Prim-Pol
 pf:NRIP1_repr_1Nuclear receptor-interacting protein 1 repression 1
 pf:NTP_transf_5Uncharacterised nucleotidyltransferase
 pf:RNA_ligaseRNA ligase
 pf:Read-throughRead-through domain
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

sen:SACE_2706 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

req:REQ_26630 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

amq:AMETH_5252 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

aoi:AORI_1870 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Read-through

aja:AJAP_30105 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Read-through

svi:Svir_20210 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mmar:MODMU_2075 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pdx:Psed_4989 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

rha:RHA1_ro00015 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

actn:L083_1682 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

afs:AFR_28570 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

roa:Pd630_LPD04033 pf:DNA_ligase_A_M pf:NTP_transf_5 pf:DNA_ligase_A_C

nbr:O3I_020445 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

ncy:NOCYR_3082 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C


gob:Gobs_2120 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

tcu:Tcur_1208 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

rop:ROP_pROB01-05350 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

tbi:Tbis_2338 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

cfi:Celf_0800 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

bsd:BLASA_3098 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cai:Caci_5248 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF6643 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2


apn:Asphe3_04250 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

sesp:BN6_42910 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

rpy:Y013_03425 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

aau:AAur_0283 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

gor:KTR9_5426 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

arr:ARUE_c02810 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cmc:CMN_02036 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

fal:FRAAL4382 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sci:B446_04080 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

rey:O5Y_21290 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

ach:Achl_0520 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF4434 pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

cmi:CMM_2074 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

sfa:Sfla_4021 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mau:Micau_0484 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

vma:VAB18032_06515 pf:DNA_ligase_A_M pf:DUF5415 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

sco:SCO7345 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

slv:SLIV_02570 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

dti:Desti_0132 pf:LigD_N pf:NRIP1_repr_1 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

gba:J421_4010 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

strp:F750_2702 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

sho:SHJGH_1851 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

shy:SHJG_2086 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

cwo:Cwoe_4716 pf:LigD_N pf:DUF1999 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

mkm:Mkms_5930 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmc:Mmcs_5528 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mil:ML5_0458 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

mph:MLP_04810 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

ssx:SACTE_2357 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

msa:Mycsm_07191 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

mti:MRGA423_05890 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

sgr:SGR_6690 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

art:Arth_0294 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mao:MAP4_2980 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C


mjl:Mjls_4732 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mavd:NF84_04590 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mavr:LA63_04695 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mkn:MKAN_09095 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mav:MAV_1056 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

fri:FraEuI1c_4744 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

maf:MAF_09470 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbb:BCG_0992 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbk:K60_010050 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbm:BCGMEX_0963 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C


mbt:JTY_0962 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mbz:LH58_05110 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmi:MMAR_4573 pf:LigD_Prim-Pol pf:DNA_primase_S pf:DUF6866_C pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mra:MRA_0946 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtb:TBMG_03051 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtc:MT0965 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtd:UDA_0938 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mte:CCDC5079_0867 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtj:J112_05060 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtk:TBSG_03071 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtl:CCDC5180_0858 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtn:ERDMAN_1039 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mto:MTCTRI2_0962 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtq:HKBS1_0986 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtu:Rv0938 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtub:MT7199_0957 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtuc:J113_06570 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtul:TBHG_00923 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtur:CFBS_0986 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtut:HKBT1_0986 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtuu:HKBT2_0987 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtv:RVBD_0938 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtx:M943_04915 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mtz:TBXG_003031 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

nca:Noca_1235 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

mcv:BN43_20408 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mul:MUL_4434 pf:LigD_Prim-Pol pf:DNA_primase_S pf:DUF6866_C pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

bfa:Bfae_07110 pf:LigD_Prim-Pol pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mce:MCAN_09381 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mcq:BN44_11030 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mcx:BN42_20748 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mcz:BN45_20239 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

sgu:SGLAU_02470 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C