Search common motifs in selected sequences


  
Motifs : pf:3HCDH_N3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
 pf:5TM-5TMR_LYT5TMR of 5TMR-LYT
 pf:AAAATPase family associated with various cellular activities (AAA)
 pf:AAA_11AAA domain
 pf:AAA_16AAA ATPase domain
 pf:AAA_19AAA domain
 pf:AAA_22AAA domain
 pf:AAA_25AAA domain
 pf:AAA_5AAA domain (dynein-related subfamily)
 pf:AAA_7P-loop containing dynein motor region D3
 pf:ABC1ABC1 family
 pf:ADAM17_MPDMembrane-proximal domain, switch, for ADAM17
 pf:APG6_N
 pf:APHPhosphotransferase enzyme family
 pf:Ald_Xan_dh_CAldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
 pf:BCCTBCCT, betaine/carnitine/choline family transporter
 pf:Bax1-IInhibitor of apoptosis-promoting Bax1
 pf:C2-set_2CD80-like C2-set immunoglobulin domain
 pf:CHCalponin homology (CH) domain
 pf:COX1Cytochrome C and Quinol oxidase polypeptide I
 pf:CRLF2-like_D2
 pf:Cation_ATPase_CCation transporting ATPase, C-terminus
 pf:CorACorA-like Mg2+ transporter protein
 pf:CsoSCA_N
 pf:Cys_rich_CPXGCysteine-rich CPXCG
 pf:Cyt_bd_oxida_IICytochrome bd terminal oxidase subunit II
 pf:DAOFAD dependent oxidoreductase
 pf:DDE_Tnp_IS66Transposase IS66 family
 pf:DNA_pol3_deltaDNA polymerase III, delta subunit
 pf:DUF1043Protein of unknown function (DUF1043)
 pf:DUF1129Protein of unknown function (DUF1129)
 pf:DUF1516Protein of unknown function (DUF1516)
 pf:DUF1648Protein of unknown function (DUF1648)
 pf:DUF202Domain of unknown function (DUF202)
 pf:DUF2214Predicted membrane protein (DUF2214)
 pf:DUF2339Predicted membrane protein (DUF2339)
 pf:DUF2975Protein of unknown function (DUF2975)
 pf:DUF3290Protein of unknown function (DUF3290)
 pf:DUF3461Protein of unknown function (DUF3461)
 pf:DUF3464Protein of unknown function (DUF3464)
 pf:DUF3884Protein of unknown function (DUF3884)
 pf:DUF4140N-terminal domain of unknown function (DUF4140)
 pf:DUF4212Domain of unknown function (DUF4212)
 pf:DUF423Protein of unknown function (DUF423)
 pf:DUF4231Protein of unknown function (DUF4231)
 pf:DUF4233Protein of unknown function (DUF4233)
 pf:DUF5065Domain of unknown function (DUF5065)
 pf:DUF5581
 pf:DUF6351
 pf:DUF6557
 pf:DUF805Protein of unknown function (DUF805)
 pf:DUF883_C
 pf:DUF996Protein of unknown function (DUF996)
 pf:DisintegrinDisintegrin
 pf:DpnIDam-replacing family
 pf:EAD6
 pf:EALEAL domain
 pf:EHD_NN-terminal EH-domain containing protein
 pf:EamAEamA-like transporter family
 pf:Elf1Transcription elongation factor Elf1 like
 pf:Epimerase_2UDP-N-acetylglucosamine 2-epimerase
 pf:EsterasePutative esterase
 pf:Exo_endo_phosEndonuclease/Exonuclease/phosphatase family
 pf:FAD_binding_2FAD binding domain
 pf:FAD_binding_3FAD binding domain
 pf:FAD_oxidoredFAD dependent oxidoreductase
 pf:FBP_CFBP C-terminal treble-clef zinc-finger
 pf:FERM_MFERM central domain
 pf:FERM_NFERM N-terminal domain
 pf:FERM_f0N-terminal or F0 domain of Talin-head FERM
 pf:FTSW_RODA_SPOVECell cycle protein
 pf:FtsXFtsX-like permease family
 pf:GCD14tRNA methyltransferase complex GCD14 subunit
 pf:GCD14_NtRNA methyltransferase complex GCD14 subunit N-term
 pf:GGDEFDiguanylate cyclase, GGDEF domain
 pf:GIDAGlucose inhibited division protein A
 pf:GNVRG-rich domain on putative tyrosine kinase
 pf:Gly_transporter
 pf:Glyco_trans_4_4Glycosyl transferase 4-like domain
 pf:Glyco_transf_4Glycosyltransferase Family 4
 pf:Glycos_transf_4Glycosyl transferase family 4
 pf:HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:HATPase_c_2Histidine kinase-like ATPase domain
 pf:HATPase_c_3Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:HATPase_c_5GHKL domain
 pf:HI0933_likeHI0933-like protein
 pf:HSF_DNA-bindHSF-type DNA-binding
 pf:HTH_50
 pf:HisKAHis Kinase A (phospho-acceptor) domain
 pf:I-setImmunoglobulin I-set domain
 pf:Ig_2Immunoglobulin domain
 pf:Ig_3Immunoglobulin domain
 pf:IstB_IS21IstB-like ATP binding protein
 pf:Kinase-likeKinase-like
 pf:LacY_sympLacY proton/sugar symporter
 pf:Lar_restr_allevRestriction alleviation protein Lar
 pf:Lys_Orn_oxgnase
 pf:MFS_1Major Facilitator Superfamily
 pf:MFS_1_likeMFS_1 like family
 pf:MFS_2MFS/sugar transport protein
 pf:MFS_MOT1Molybdate transporter of MFS superfamily
 pf:MaAIMP_smsPutative methionine and alanine importer, small subunit
 pf:Med9RNA polymerase II transcription mediator complex subunit 9
 pf:MerR-DNA-bindMerR, DNA binding
 pf:Methyltr_RsmB-F16S rRNA methyltransferase RsmB/F
 pf:Methyltransf_11Methyltransferase domain
 pf:Methyltransf_12Methyltransferase domain
 pf:Methyltransf_23Methyltransferase domain
 pf:Methyltransf_24Methyltransferase domain
 pf:Methyltransf_25Methyltransferase domain
 pf:Methyltransf_31Methyltransferase domain
 pf:Methyltransf_4Putative methyltransferase
 pf:Mg_chelataseMagnesium chelatase, subunit ChlI
 pf:MoCoBD_1
 pf:MoCoBD_2
 pf:MraY_sig1Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
 pf:NAD_binding_8NAD(P)-binding Rossmann-like domain
 pf:NAD_binding_9FAD-NAD(P)-binding
 pf:Na_Ala_sympSodium:alanine symporter family
 pf:Na_H_ExchangerSodium/hydrogen exchanger family
 pf:Nuc_H_symportNucleoside H+ symporter
 pf:Nuc_sug_transpNucleotide-sugar transporter
 pf:OATPOrganic Anion Transporter Polypeptide (OATP) family
 pf:OMP_b-brl_3Outer membrane protein beta-barrel family
 pf:OTU1_UBXL
 pf:PASPAS fold
 pf:PAS_11PAS domain
 pf:PAS_3PAS fold
 pf:PAS_4PAS fold
 pf:PAS_8PAS domain
 pf:PAS_9PAS domain
 pf:PCMTProtein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
 pf:PEN-2Presenilin enhancer-2 subunit of gamma secretase
 pf:PK_Tyr_Ser-Thr
 pf:Pep_M12B_propepReprolysin family propeptide
 pf:Peptidase_S9Prolyl oligopeptidase family
 pf:Peptidase_S9_NProlyl oligopeptidase, N-terminal beta-propeller domain
 pf:Phage_holin_2_1Bacteriophage P21 holin S
 pf:PhoHPhoH-like protein
 pf:Pif1_2B_dom
 pf:PkinaseProtein kinase domain
 pf:Pkinase_fungal
 pf:Pkr1ER protein Pkr1
 pf:PlugTonB-dependent Receptor Plug Domain
 pf:Polysacc_syntPolysaccharide biosynthesis protein
 pf:Prim_Zn_RibbonZinc-binding domain of primase-helicase
 pf:PrmARibosomal protein L11 methyltransferase (PrmA)
 pf:Pur_ac_phosph_NPurple acid Phosphatase, N-terminal domain
 pf:Pyr_redoxPyridine nucleotide-disulphide oxidoreductase
 pf:Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductase
 pf:Pyr_redox_3Pyridine nucleotide-disulphide oxidoreductase
 pf:Pyr_redox_dimPyridine nucleotide-disulphide oxidoreductase, dimerisation domain
 pf:RUBY_RBDX
 pf:Rce1-like
 pf:Reelin_subrepeat-B
 pf:ReprolysinReprolysin (M12B) family zinc metalloprotease
 pf:Reprolysin_2Metallo-peptidase family M12B Reprolysin-like
 pf:Reprolysin_3Metallo-peptidase family M12B Reprolysin-like
 pf:Reprolysin_4Metallo-peptidase family M12B Reprolysin-like
 pf:Reprolysin_5Metallo-peptidase family M12
 pf:RocRas of Complex, Roc, domain of DAPkinase
 pf:RrnaADRibosomal RNA adenine dimethylase
 pf:RsgA_GTPase
 pf:STASSTAS domain
 pf:Seadorna_VP7Seadornavirus VP7
 pf:Sigma54_activ_2Sigma-54 interaction domain
 pf:Sigma54_activatSigma-54 interaction domain
 pf:Sigma_reg_NSigma factor regulator N-terminal
 pf:Sugar_trSugar (and other) transporter
 pf:Sulfate_transpSulfate permease family
 pf:TF_Zn_RibbonTFIIB zinc-binding
 pf:TIGIPT/TIG domain
 pf:TRI12Fungal trichothecene efflux pump (TRI12)
 pf:TannaseTannase and feruloyl esterase
 pf:TonB_dep_RecTonB dependent receptor
 pf:TrkA_NTrkA-N domain
 pf:TsaEThreonylcarbamoyl adenosine biosynthesis protein TsaE
 pf:UAAUAA transporter family
 pf:Ubie_methyltranubiE/COQ5 methyltransferase family
 pf:V-setImmunoglobulin V-set domain
 pf:VinculinVinculin family
 pf:WASH-7_midWASH complex subunit 7
 pf:Wzy_CO-Antigen ligase
 pf:WzzChain length determinant protein
 pf:Xan_ur_permeasePermease family
 pf:XhlAHaemolysin XhlA
 pf:YJL171C_Tos1_C
 pf:ZSWIM1-3_RNaseH-like
 pf:Zn_Tnp_IS1595Transposase zinc-ribbon domain
 pf:cNMP_bindingCyclic nucleotide-binding domain
 pf:fn3Fibronectin type III domain
 pf:igImmunoglobulin domain
 pf:p450Cytochrome P450
 pf:ubiquitinUbiquitin family

sgo:SGO_1211 pf:DUF2214 pf:MaAIMP_sms




smus:C7J88_00425 pf:FTSW_RODA_SPOVE

llm:llmg_2168 pf:Gly_transporter pf:Gly_transporter

lln:LLNZ_11195 pf:Gly_transporter pf:Gly_transporter

lla:L169795 pf:Gly_transporter pf:Gly_transporter

llc:LACR_2180 pf:Gly_transporter pf:Gly_transporter

lld:P620_11150 pf:Gly_transporter pf:Gly_transporter

lli:uc509_1884 pf:Gly_transporter pf:Gly_transporter

llj:LG36_1865 pf:Gly_transporter pf:Gly_transporter

llk:LLKF_2103 pf:Gly_transporter pf:Gly_transporter

llr:llh_10995 pf:Gly_transporter pf:Gly_transporter

lls:lilo_1914 pf:Gly_transporter pf:Gly_transporter

llt:CVCAS_1909 pf:Gly_transporter pf:Gly_transporter

llw:kw2_1980 pf:Gly_transporter pf:Gly_transporter

llx:NCDO2118_2030 pf:Gly_transporter pf:Gly_transporter

spzr:G5C33_17195 pf:5TM-5TMR_LYT pf:DUF2975

agq:LQZ07_15300 pf:PAS pf:PAS_8 pf:RsgA_GTPase pf:AAA_7 pf:Sigma54_activat pf:Sigma54_activ_2 pf:AAA_16 pf:AAA_22 pf:AAA_5 pf:HTH_50

metz:METMT2_1484 pf:Pyr_redox_2 pf:Pyr_redox_3 pf:FAD_binding_2 pf:HI0933_like pf:DAO pf:FAD_oxidored pf:GIDA pf:NAD_binding_9 pf:FAD_binding_3 pf:TrkA_N pf:NAD_binding_8 pf:DUF6557 pf:Pyr_redox_3 pf:Lys_Orn_oxgnase pf:WASH-7_mid pf:Pyr_redox pf:3HCDH_N pf:GIDA pf:Pyr_redox_dim

kus:B9G99_09055 pf:BCCT

slz:B5P37_09630 pf:FTSW_RODA_SPOVE pf:Bax1-I

agz:M0C34_11855 pf:PAS pf:PAS_8 pf:AAA_16 pf:Sigma54_activat pf:Sigma54_activ_2 pf:AAA_22 pf:AAA_5 pf:HTH_50

phj:LC071_17380 pf:DUF1648

cpip:CJF12_12450 pf:Plug pf:TonB_dep_Rec pf:ZSWIM1-3_RNaseH-like pf:OMP_b-brl_3

dtu:Dtur_1601 pf:GCD14_N pf:GCD14 pf:PCMT pf:RrnaAD pf:Methyltransf_31 pf:Ubie_methyltran pf:Methyltransf_23 pf:PrmA pf:Methyltr_RsmB-F pf:Methyltransf_25 pf:Methyltransf_4 pf:Methyltransf_11 pf:Methyltransf_24 pf:Methyltransf_12

mic:Mic7113_0183 pf:PAS pf:PAS_3 pf:PAS_9 pf:PAS_11 pf:PAS_4 pf:HisKA pf:HATPase_c pf:HATPase_c_2

asei:I8T81_07970 pf:PAS pf:PAS_3 pf:PAS_4 pf:PAS pf:GGDEF pf:EAL

ddo:I597_2532 pf:COX1 pf:Pkr1 pf:DUF1129

aarg:Aargi30884_06160 pf:FtsX pf:FtsX pf:FtsX

absi:A9CBEGH2_07480 pf:FtsX pf:FtsX pf:FtsX

cpla:122541365 pf:Reprolysin_5 pf:Reprolysin pf:Reprolysin_2 pf:Reprolysin_3 pf:Reprolysin_4 pf:Reprolysin pf:Disintegrin pf:ADAM17_MPD

grc:GI584_10005 pf:Rce1-like

psor:RSJ16_12800 pf:Sigma_reg_N pf:Pif1_2B_dom pf:HisKA pf:p450 pf:HATPase_c pf:HATPase_c_5 pf:HATPase_c_3

vg:13994276 pf:Cation_ATPase_C pf:DUF4233

amil:114970814 pf:Na_H_Exchanger

bqr:RM11_0844 pf:MraY_sig1 pf:Glycos_transf_4

bqu:BQ08890 pf:MraY_sig1 pf:Glycos_transf_4

bthg:MS2017_2066 pf:IstB_IS21 pf:AAA_11 pf:Mg_chelatase pf:AAA_19 pf:AAA pf:AAA_22 pf:AAA_25 pf:PhoH pf:TIG pf:AAA pf:AAA_5 pf:EHD_N

des:DSOUD_2927 pf:MraY_sig1 pf:Glycos_transf_4

eac:EAL2_c20100 pf:Wzy_C

hoc:132834418 pf:Pep_M12B_propep pf:Reprolysin_5 pf:Reprolysin pf:Reprolysin_2 pf:Reprolysin_3 pf:Reprolysin_4 pf:Reprolysin pf:Disintegrin pf:ADAM17_MPD

kma:B9H00_05800 pf:BCCT

lvn:BWR22_05135 pf:COX1 pf:Pkr1

prn:BW723_15930 pf:MFS_1 pf:COX1 pf:Pkr1

stab:STABA_v1c09040 pf:TsaE pf:Roc

mei:Msip34_2083 pf:DUF996 pf:Polysacc_synt pf:CorA

nall:PP769_06445 pf:MraY_sig1 pf:DUF3464 pf:Glycos_transf_4

nmg:Nmag_3115 pf:DUF4231 pf:DUF202

nneo:PQG83_17665 pf:MraY_sig1 pf:DUF3464 pf:Glycos_transf_4

pchu:QNI29_16240 pf:LacY_symp pf:MFS_1_like pf:Nuc_H_symport pf:MFS_1 pf:MFS_2 pf:MFS_1

rsr:T7867_12860 pf:MFS_1 pf:Nuc_H_symport pf:MFS_1

saul:I6G39_07495 pf:MraY_sig1 pf:Glycos_transf_4

sdo:SD1155_08070 pf:MraY_sig1 pf:DUF1516 pf:Glycos_transf_4

spas:STP1_2213 pf:MraY_sig1 pf:DUF1516 pf:Glycos_transf_4

swa:A284_07705 pf:MraY_sig1 pf:DUF1516 pf:Glycos_transf_4

bapi:BBC0122_015410 pf:MraY_sig1 pf:Glycos_transf_4

bwe:BcerKBAB4_3405 pf:Wzz pf:GNVR

chz:CHSO_0280 pf:Peptidase_S9_N pf:Peptidase_S9 pf:Tannase pf:DUF6351

corz:MTP08_12965 pf:Peptidase_S9_N pf:DUF5065 pf:Peptidase_S9 pf:Tannase pf:DUF6351

dsal:K1X15_01505 pf:MFS_1 pf:TRI12 pf:Sugar_tr

mcep:125017243 pf:I-set pf:Ig_3 pf:ig pf:Ig_2 pf:Ig_3 pf:I-set pf:ig pf:Ig_2 pf:fn3 pf:Pur_ac_phosph_N pf:CRLF2-like_D2 pf:DUF5581 pf:Pkinase pf:PK_Tyr_Ser-Thr pf:Kinase-like pf:Ig_3 pf:I-set pf:ig pf:Ig_2 pf:V-set pf:C2-set_2

mlen:H3V22_00020 pf:FTSW_RODA_SPOVE

npm:QEO92_11245 pf:MraY_sig1 pf:Glycos_transf_4

tmf:EYB26_008300 pf:CH

ccao:H5J24_21285 pf:Peptidase_S9_N pf:DUF3884 pf:Peptidase_S9 pf:Tannase pf:Esterase pf:DUF6351

ccys:SAMEA4530656_1205 pf:DUF2339 pf:DUF2339

cmit:NQ499_11930 pf:DpnI pf:Zn_Tnp_IS1595 pf:TF_Zn_Ribbon pf:Elf1 pf:RUBY_RBDX pf:Cys_rich_CPXG pf:Prim_Zn_Ribbon pf:Lar_restr_allev pf:FBP_C pf:DDE_Tnp_IS66

ebv:F0358_06195 pf:DUF3290 pf:DUF423 pf:DUF202 pf:PEN-2

lja:Lj4g3v2403200.1 pf:Exo_endo_phos

mary:LAU42_02280 pf:DUF805

mcak:MCCS_05570 pf:DUF805

niq:126777961 pf:FERM_f0 pf:OTU1_UBXL pf:ubiquitin pf:FERM_N pf:FERM_f0 pf:FERM_M pf:MerR-DNA-bind pf:Med9 pf:Vinculin pf:Vinculin

ocs:OF820_04230 pf:DNA_pol3_delta

srot:ML435_05400 pf:MraY_sig1 pf:Glycos_transf_4

ssh:NCTC13712_01127 pf:MraY_sig1 pf:Glycos_transf_4

suh:SAMSHR1132_10240 pf:MraY_sig1 pf:Glycos_transf_4

bapa:BBC0178_015200 pf:MraY_sig1 pf:Glycos_transf_4

bcel:BcellWH2_00699 pf:Epimerase_2 pf:Glyco_trans_4_4 pf:Glyco_transf_4 pf:EAD6

bteq:G4P54_01430 pf:Na_Ala_symp

flp:LK994_14330 pf:Ald_Xan_dh_C pf:MoCoBD_1 pf:YJL171C_Tos1_C pf:MoCoBD_2 pf:DUF4140

glp:Glo7428_3762 pf:Reelin_subrepeat-B

hhao:QWG60_04440 pf:BCCT

mefw:F1737_02615 pf:MFS_1 pf:Sugar_tr pf:OATP pf:OATP pf:Sugar_tr

plx:CW734_14000 pf:Wzy_C

sht:KO02_10510 pf:Sulfate_transp pf:Xan_ur_permease pf:Phage_holin_2_1 pf:MFS_MOT1 pf:STAS

xco:114158207 pf:DUF1043 pf:CsoSCA_N pf:cNMP_binding pf:cNMP_binding pf:Pkinase pf:PK_Tyr_Ser-Thr pf:ABC1 pf:APH pf:Kinase-like pf:Pkinase_fungal pf:Seadorna_VP7

xhe:116733691 pf:DUF1043 pf:CsoSCA_N pf:cNMP_binding pf:cNMP_binding pf:Pkinase pf:PK_Tyr_Ser-Thr pf:ABC1 pf:APH pf:Kinase-like pf:Pkinase_fungal pf:Seadorna_VP7

xma:102216397 pf:DUF1043 pf:CsoSCA_N pf:cNMP_binding pf:cNMP_binding pf:Pkinase pf:PK_Tyr_Ser-Thr pf:ABC1 pf:APH pf:Kinase-like pf:Pkinase_fungal pf:Seadorna_VP7

alkg:MOJ78_08955 pf:Cyt_bd_oxida_II pf:DUF883_C

ctur:LNP04_12465 pf:Peptidase_S9_N pf:Peptidase_S9 pf:Tannase pf:DUF6351

hhy:Halhy_2333 pf:MFS_1 pf:Sugar_tr pf:Sugar_tr pf:MFS_1 pf:DUF202

mcaw:F6J84_09455 pf:MraY_sig1 pf:DUF4212 pf:Glycos_transf_4

sauc:CA347_1097 pf:MraY_sig1 pf:Glycos_transf_4

scap:AYP1020_0490 pf:MraY_sig1 pf:Glycos_transf_4

ssim:SAMEA4384339_1070 pf:MraY_sig1 pf:Glycos_transf_4

vcd:124540387 pf:FERM_f0 pf:ubiquitin pf:FERM_N pf:FERM_f0 pf:FERM_M pf:Vinculin pf:Vinculin

aew:130766259 pf:HSF_DNA-bind pf:DUF3461 pf:APG6_N pf:XhlA

ahf:112764614 pf:Nuc_sug_transp pf:EamA pf:UAA pf:EamA

aip:107606802 pf:Nuc_sug_transp pf:EamA pf:UAA pf:Nuc_sug_transp