Search common motifs in selected sequences


  
Motifs : pf:3HBOH3HB-oligomer hydrolase (3HBOH)
 pf:A2MAlpha-2-macroglobulin family
 pf:A2M_BRD
 pf:AA9
 pf:AAA_11AAA domain
 pf:AAA_12AAA domain
 pf:AAA_16AAA ATPase domain
 pf:AAA_18AAA domain
 pf:AAA_19AAA domain
 pf:AAA_22AAA domain
 pf:AAA_25AAA domain
 pf:AAA_28AAA domain
 pf:AAA_29P-loop containing region of AAA domain
 pf:AAA_30AAA domain
 pf:AHJR-like
 pf:ALOD-arabinono-1,4-lactone oxidase
 pf:AMPK_alpha_AID
 pf:APG6_N
 pf:CRR42-like
 pf:Cas_Cas4Domain of unknown function DUF83
 pf:Chordopox_G2Chordopoxvirus protein G2
 pf:Cnd1non-SMC mitotic condensation complex subunit 1
 pf:Csa1
 pf:DEADDEAD/DEAH box helicase
 pf:DEAD_2DEAD_2
 pf:DUF1473Protein of unknown function (DUF1473)
 pf:DUF2659Protein of unknown function (DUF2659)
 pf:DUF2800Protein of unknown function (DUF2800)
 pf:DUF3333Domain of unknown function (DUF3333)
 pf:DUF3671Protein of unknown function
 pf:DUF3784Domain of unknown function (DUF3784)
 pf:DUF3799PDDEXK-like domain of unknown function (DUF3799)
 pf:DUF4064Protein of unknown function (DUF4064)
 pf:DUF4143Domain of unknown function (DUF4143)
 pf:DUF5580
 pf:DUF5847
 pf:DUF6099
 pf:DUF6724
 pf:DUF730Protein of unknown function (DUF730)
 pf:Dak2DAK2 domain
 pf:DesulfoferrodoxDesulfoferrodoxin
 pf:Dna2DNA replication factor Dna2
 pf:Dna2_Rift
 pf:ETRAMPMalarial early transcribed membrane protein (ETRAMP)
 pf:Exo5Exonuclease V - a 5' deoxyribonuclease
 pf:GpA_ATPase
 pf:HSDR_N_2Type I restriction enzyme R protein N terminus (HSDR_N)
 pf:HSP33Hsp33 protein
 pf:Helicase_C_2Helicase C-terminal domain
 pf:Helicase_RecDHelicase
 pf:HerA_C
 pf:HjcArchaeal holliday junction resolvase (hjc)
 pf:ITPK1_preATP-grasp
 pf:KIAA1328Uncharacterised protein KIAA1328
 pf:Ku_PK_bindKu C terminal domain like
 pf:MG2
 pf:Mrr_catRestriction endonuclease
 pf:Myco_19_kDaMycobacterium 19 kDa lipoprotein antigen
 pf:PDDEXK_1PD-(D/E)XK nuclease superfamily
 pf:PDDEXK_10PD-(D/E)XK nuclease superfamily
 pf:PDDEXK_3PD-(D/E)XK nuclease superfamily
 pf:PDDEXK_9PD-(D/E)XK nuclease superfamily
 pf:PIF1PIF1-like helicase
 pf:PTS_EIIA_1phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
 pf:Paf67RNA polymerase I-associated factor PAF67
 pf:PhoHPhoH-like protein
 pf:PlugTonB-dependent Receptor Plug Domain
 pf:Pox_VP8_L4RPoxvirus nucleic acid binding protein VP8/L4R
 pf:PriA-like_WH
 pf:PsbUPhotosystem II 12 kDa extrinsic protein (PsbU)
 pf:RE_TdeIIIType II restriction endonuclease, TdeIII
 pf:ResIIIType III restriction enzyme, res subunit
 pf:Rod_cone_degenProgressive rod-cone degeneration
 pf:SLFN-g3_helicase
 pf:SRP54SRP54-type protein, GTPase domain
 pf:SfsASugar fermentation stimulation protein
 pf:Shugoshin_NShugoshin N-terminal coiled-coil region
 pf:T2SSEType II/IV secretion system protein
 pf:T7SS_signal
 pf:TGT_C1C1 domain of tRNA-guanine transglycosylase dimerisation
 pf:TgpA_N
 pf:Tox-REase-9Restriction endonuclease fold toxin 9
 pf:UvrD-helicaseUvrD/REP helicase N-terminal domain
 pf:UvrD_CUvrD-like helicase C-terminal domain
 pf:UvrD_C_2UvrD-like helicase C-terminal domain
 pf:VP4_helical
 pf:Viral_helicase1Viral (Superfamily 1) RNA helicase
 pf:WSS_VPWhite spot syndrome virus structural envelope protein VP
 pf:XisHXisH protein
 pf:YhcG_C
 pf:YqaJYqaJ-like viral recombinase domain
 pf:Zn-ribbon_8Zinc ribbon domain
 pf:ZotZonular occludens toxin (Zot)
 pf:nSTAND3
 pf:zf-RING_7C4-type zinc ribbon domain

sid:M164_2119 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:DUF6724

sia:M1425_2113 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:DUF6724

sim:M1627_2195 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:DUF6724

sii:LD85_2382 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sin:YN1551_0674 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sis:LS215_2278 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

siy:YG5714_2242 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sic:SiL_1967 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sih:SiH_2061 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sir:SiRe_1994 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sshi:J5U23_00249 pf:Cas_Cas4 pf:Dna2 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3 pf:WSS_VP pf:DUF6724

sule:GFS03_11540 pf:Cas_Cas4 pf:Dna2 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

sol:Ssol_0985 pf:Cas_Cas4 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

sso:SSO0001 pf:Cas_Cas4 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

ssoa:SULA_1018 pf:Cas_Cas4 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

ssof:SULC_1019 pf:Cas_Cas4 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

ssol:SULB_1020 pf:Cas_Cas4 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

scas:SACC_31870 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

sula:BFU36_05840 pf:Cas_Cas4 pf:DUF3333 pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

sto:STK_23310 pf:Cas_Cas4 pf:YqaJ pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

soh:D1869_12795 pf:Cas_Cas4 pf:YqaJ pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

abri:DFR85_06340 pf:Pox_VP8_L4R pf:Cas_Cas4 pf:PDDEXK_1 pf:SfsA pf:PDDEXK_9 pf:PDDEXK_3 pf:AHJR-like pf:ITPK1_preATP-grasp

sull:EWF20_13855 pf:Cas_Cas4 pf:YqaJ pf:PDDEXK_3 pf:PDDEXK_1

asul:DFR86_08015 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:Cas_Cas4 pf:PDDEXK_1 pf:SfsA

aman:B6F84_09330 pf:RE_TdeIII pf:PDDEXK_3 pf:SfsA pf:PDDEXK_1 pf:Cas_Cas4 pf:PDDEXK_9

aamb:D1866_00125 pf:Cas_Cas4 pf:PTS_EIIA_1 pf:PDDEXK_3 pf:PDDEXK_1 pf:SfsA pf:PDDEXK_9 pf:AHJR-like

csty:KN1_07130 pf:PDDEXK_1 pf:PDDEXK_3 pf:PDDEXK_1

sacn:SacN8_01340 pf:Chordopox_G2 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

sacr:SacRon12I_01340 pf:Chordopox_G2 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

sacs:SUSAZ_01385 pf:Chordopox_G2 pf:PDDEXK_3 pf:PDDEXK_1 pf:Cas_Cas4 pf:AHJR-like

sai:Saci_0274 pf:Chordopox_G2 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

sazo:D1868_08475 pf:DUF2659 pf:PDDEXK_3 pf:PDDEXK_1

acih:HS5_24440 pf:RE_TdeIII pf:PDDEXK_3 pf:Cas_Cas4 pf:PDDEXK_1 pf:SfsA pf:PDDEXK_9 pf:AHJR-like

aho:Ahos_1052 pf:PTS_EIIA_1 pf:PDDEXK_3 pf:PDDEXK_1 pf:Cas_Cas4 pf:SfsA pf:PDDEXK_9 pf:Mrr_cat pf:AHJR-like pf:Hjc

iag:Igag_1219 pf:Paf67 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1

apo:Arcpr_1431 pf:PDDEXK_1

memj:MJ1HA_1956 pf:Dna2 pf:PDDEXK_1

vg:26644731 pf:PDDEXK_1 pf:PDDEXK_3 pf:Cas_Cas4 pf:SfsA pf:PDDEXK_9 pf:Mrr_cat pf:AHJR-like pf:XisH pf:Shugoshin_N

tcb:TCARB_0632 pf:PDDEXK_1

thb:N186_07740 pf:PDDEXK_1

tpe:Tpen_1602 pf:PDDEXK_1

shc:Shell_1273 pf:KIAA1328 pf:Dna2 pf:PDDEXK_3 pf:Csa1 pf:PDDEXK_1 pf:DUF3799

smr:Smar_1195 pf:KIAA1328 pf:Dna2 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:DUF3799

tag:Tagg_0099 pf:Cas_Cas4 pf:Dna2 pf:PDDEXK_1 pf:PDDEXK_3 pf:PDDEXK_1 pf:Myco_19_kDa

ffo:FFONT_1307 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1

dfd:Desfe_1099 pf:PDDEXK_3 pf:Tox-REase-9 pf:PDDEXK_1 pf:Hjc

dka:DKAM_0981 pf:PDDEXK_3 pf:Tox-REase-9 pf:PDDEXK_1 pf:Hjc

dmu:Desmu_0121 pf:Dna2 pf:Cas_Cas4 pf:PDDEXK_3 pf:Tox-REase-9 pf:PDDEXK_1

pare:PYJP_03400 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:Desulfoferrodox

pdl:Pyrde_1677 pf:PDDEXK_3 pf:PDDEXK_1 pf:PDDEXK_9 pf:Cas_Cas4 pf:HSDR_N_2

pfm:Pyrfu_0578 pf:Dna2 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1

hbu:Hbut_0944 pf:PDDEXK_3 pf:PDDEXK_1 pf:Cas_Cas4

thg:TCELL_0595 pf:Cas_Cas4 pf:Tox-REase-9 pf:PDDEXK_1 pf:PDDEXK_3

pmx:PERMA_A0049 pf:DUF1473 pf:YqaJ pf:PDDEXK_1

thel:IG193_02990 pf:Cas_Cas4 pf:PDDEXK_1 pf:Exo5

ccai:NAS2_1530 pf:Cas_Cas4 pf:PDDEXK_1 pf:PDDEXK_3

smet:RQ359_002176 pf:PDDEXK_1 pf:PDDEXK_3 pf:3HBOH pf:PDDEXK_9 pf:Cas_Cas4

step:IC006_2051 pf:PDDEXK_1 pf:PDDEXK_3 pf:PDDEXK_9

mcn:Mcup_1709 pf:PDDEXK_1 pf:Cas_Cas4

mten:GWK48_07095 pf:PDDEXK_1 pf:PDDEXK_3 pf:3HBOH

mhk:DFR87_04210 pf:Rod_cone_degen pf:CRR42-like pf:PDDEXK_1 pf:3HBOH

thf:MA03_04855 pf:Cas_Cas4 pf:PDDEXK_1 pf:Exo5

mjn:MjAS7_1038 pf:PDDEXK_1 pf:TGT_C1 pf:PDDEXK_3 pf:Cas_Cas4

pcl:Pcal_0546 pf:PDDEXK_1 pf:Cas_Cas4 pf:HSDR_N_2 pf:YhcG_C pf:PDDEXK_1 pf:PDDEXK_3 pf:DUF4143

hno:LT974_16425 pf:PDDEXK_1 pf:Cas_Cas4 pf:Zn-ribbon_8

pis:Pisl_1722 pf:PDDEXK_1 pf:Cas_Cas4 pf:PDDEXK_1 pf:PDDEXK_3 pf:HSDR_N_2

ipc:IPA_01875 pf:Cas_Cas4 pf:PDDEXK_1

hda:BB347_17480 pf:PDDEXK_1 pf:Cas_Cas4 pf:PsbU pf:Zn-ribbon_8

tne:Tneu_0740 pf:PDDEXK_1 pf:Cas_Cas4 pf:PDDEXK_1 pf:PDDEXK_3

hsf:HLASA_1014 pf:PDDEXK_1 pf:Cas_Cas4

hsu:HLASF_1025 pf:PDDEXK_1 pf:Cas_Cas4

thm:CL1_0382 pf:PDDEXK_1

tsi:TSIB_1493 pf:Dna2 pf:PDDEXK_1 pf:Cas_Cas4

thei:K1720_00480 pf:Dna2 pf:PDDEXK_1

pabs:JIR001_23010 pf:UvrD-helicase pf:DEAD pf:AAA_30 pf:AAA_19 pf:AAA_12 pf:UvrD_C pf:UvrD_C_2 pf:UvrD_C_2 pf:PDDEXK_1 pf:Cas_Cas4

flh:EJ997_05545 pf:ResIII pf:AAA_30 pf:AAA_11 pf:UvrD-helicase pf:T2SSE pf:DEAD pf:AAA_19 pf:nSTAND3 pf:AAA_16 pf:AAA_22 pf:AAA_29 pf:AAA_25 pf:SLFN-g3_helicase pf:Viral_helicase1 pf:AAA_18 pf:AAA_28 pf:UvrD_C pf:DUF6099 pf:UvrD_C pf:PDDEXK_1 pf:DUF2800 pf:Cas_Cas4

pyw:PYWP30_00789 pf:PDDEXK_1 pf:Cas_Cas4 pf:Tox-REase-9 pf:PDDEXK_1 pf:PDDEXK_3

fpl:Ferp_0803 pf:Mrr_cat pf:PDDEXK_3

pai:PAE1763 pf:PDDEXK_1 pf:Cas_Cas4 pf:Tox-REase-9 pf:PDDEXK_1 pf:PDDEXK_3

aob:I6H46_04155 pf:UvrD-helicase pf:AAA_30 pf:AAA_19 pf:DEAD pf:AAA_11 pf:Helicase_RecD pf:UvrD_C pf:AAA_12 pf:UvrD_C_2 pf:UvrD_C_2 pf:PDDEXK_1 pf:Cas_Cas4

pas:Pars_0755 pf:PDDEXK_1 pf:Cas_Cas4 pf:HSDR_N_2 pf:PDDEXK_1 pf:PDDEXK_3 pf:PriA-like_WH

haad:MW046_01620 pf:PDDEXK_1 pf:Cas_Cas4 pf:Zn-ribbon_8

neq:NEQ549 pf:PDDEXK_1 pf:Cas_Cas4 pf:Csa1 pf:Cas_Cas4

prz:GZH47_33625 pf:PDDEXK_1 pf:Cas_Cas4 pf:PDDEXK_3

ttd:A3L14_11070 pf:Cas_Cas4 pf:PDDEXK_1 pf:Exo5

hlu:LT972_00015 pf:PDDEXK_1 pf:Cas_Cas4 pf:Zn-ribbon_8 pf:GpA_ATPase

acf:AciM339_0759 pf:DUF3671 pf:ETRAMP pf:DUF3784 pf:DUF4064 pf:TgpA_N pf:PDDEXK_1 pf:Cas_Cas4

abi:Aboo_0305 pf:PDDEXK_1 pf:DUF3671 pf:DUF3784 pf:PDDEXK_1 pf:Cas_Cas4

cdj:BFC22_02180 pf:ResIII pf:DEAD pf:DEAD_2 pf:DUF5580 pf:Helicase_C_2

fmo:C4N19_05535 pf:UvrD-helicase pf:AAA_11 pf:AAA_19 pf:AAA_16 pf:AAA_22 pf:UvrD_C pf:UvrD_C_2 pf:PDDEXK_1 pf:Cas_Cas4

epa:110233577 pf:Dak2 pf:Ku_PK_bind pf:Cnd1 pf:AMPK_alpha_AID

lhb:D1010_02850 pf:Myco_19_kDa pf:ResIII pf:DEAD pf:PhoH pf:DEAD_2 pf:T7SS_signal pf:Helicase_C_2

ney:NCS13_2_0148 pf:APG6_N pf:DUF5847 pf:APG6_N pf:VP4_helical pf:ALO pf:zf-RING_7

otu:111428162 pf:Dna2 pf:PDDEXK_1 pf:Cas_Cas4 pf:Dna2_Rift pf:AAA_11 pf:AAA_30 pf:UvrD-helicase pf:ResIII pf:DEAD pf:HerA_C pf:AAA_19 pf:nSTAND3 pf:PIF1 pf:SLFN-g3_helicase pf:SRP54 pf:AAA_18 pf:Viral_helicase1 pf:AAA_11 pf:AAA_12 pf:UvrD_C pf:Viral_helicase1 pf:UvrD_C pf:UvrD_C_2

pot:E2E27_11795 pf:UvrD-helicase pf:AAA_19 pf:DEAD pf:AAA_30 pf:UvrD_C pf:UvrD_C pf:UvrD_C_2 pf:UvrD_C_2

sfy:GFH48_15150 pf:UvrD-helicase pf:AAA_19 pf:AAA_30 pf:UvrD_C pf:UvrD_C pf:UvrD_C_2 pf:PDDEXK_1

pyc:TQ32_06445 pf:PDDEXK_1 pf:Cas_Cas4 pf:PhoH pf:AAA_30 pf:AAA_11 pf:AAA_19 pf:DEAD pf:Helicase_RecD pf:Zot pf:AAA_11 pf:AAA_30 pf:Viral_helicase1 pf:AAA_12 pf:UvrD_C_2

day:FV141_03905 pf:UvrD-helicase pf:AAA_30 pf:AAA_19 pf:UvrD_C pf:UvrD_C pf:UvrD_C_2 pf:UvrD_C_2 pf:DUF730 pf:PDDEXK_1

derm:H7F30_13700 pf:UvrD-helicase pf:AAA_30 pf:AAA_19 pf:UvrD_C pf:UvrD_C pf:UvrD_C_2 pf:UvrD_C_2 pf:DUF730 pf:PDDEXK_1

rhoz:GXP67_14080 pf:MG2 pf:AA9 pf:HSP33 pf:A2M_BRD pf:Plug pf:A2M

sgob:test1122_18470 pf:UvrD-helicase pf:AAA_19 pf:AAA_30 pf:UvrD_C pf:UvrD_C_2 pf:PDDEXK_1