Search common motifs in selected sequences


  
Motifs : pf:Big_4Bacterial Ig-like domain (group 4)
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_C
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DNA_primase_SDNA primase small subunit
 pf:DUF1999Protein of unknown function (DUF1999)
 pf:DUF4031Protein of unknown function (DUF4031)
 pf:DUF5415
 pf:DUF6459
 pf:DUF6643
 pf:DUF6866_C
 pf:LigD_NDNA polymerase Ligase (LigD)
 pf:LigD_Prim-Pol
 pf:NRIP1_repr_1Nuclear receptor-interacting protein 1 repression 1
 pf:NTP_transf_5Uncharacterised nucleotidyltransferase
 pf:Oxidored_nitroNitrogenase component 1 type Oxidoreductase
 pf:RNA_ligaseRNA ligase
 pf:Read-throughRead-through domain
 pf:Thr_synth_NThreonine synthase N terminus
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

svi:Svir_20210 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

amq:AMETH_5252 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

req:REQ_26630 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

ahg:AHOG_20405 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

acad:UA74_22360 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

acti:UA75_22835 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ahm:TL08_19410 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

aja:AJAP_30105 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Read-through

aoi:AORI_1870 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Read-through

amyb:BKN51_01540 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C pf:Read-through

roa:Pd630_LPD04033 pf:DNA_ligase_A_M pf:NTP_transf_5 pf:DNA_ligase_A_C

actn:L083_1682 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

acta:C1701_04550 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

rrz:CS378_19505 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

pdx:Psed_4989 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

sxi:SXIM_51150 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

gob:Gobs_2120 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ncy:NOCYR_3082 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

rav:AAT18_03845 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmar:MODMU_2075 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

noa:BKM31_52075 pf:DNA_ligase_A_M pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rpy:Y013_03425 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

afs:AFR_28570 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

nbr:O3I_020445 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

led:BBK82_36775 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

all:CRK60828 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

nfa:NFA_29400 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C pf:DUF6459

kphy:AOZ06_15230 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

tcu:Tcur_1208 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

cphy:B5808_14620 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

rha:RHA1_ro00015 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sesp:BN6_42910 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

cfi:Celf_0800 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

bsd:BLASA_3098 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

tbi:Tbis_2338 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

cwo:Cwoe_4716 pf:LigD_N pf:DUF1999 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

nfr:ERS450000_01148 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C pf:DUF6459

reb:XU06_30590 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_C pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

cai:Caci_5248 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF6643 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

strc:AA958_07435 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

fal:FRAAL4382 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pmad:BAY61_28605 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

nsr:NS506_05464 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mil:ML5_0458 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

arz:AUT26_01215 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Oxidored_nitro pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cub:BJK06_06465 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

amyc:CU254_41245 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mau:Micau_0484 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

arx:ARZXY2_3628 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Oxidored_nitro pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

arr:ARUE_c02810 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

sen:SACE_2706 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

fri:FraEuI1c_4744 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

arn:CGK93_01640 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Oxidored_nitro pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

aau:AAur_0283 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

dti:Desti_0132 pf:LigD_N pf:NRIP1_repr_1 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

bcv:Bcav_0653 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

stp:Strop_3968 pf:DNA_ligase_A_M pf:DUF5415 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

cum:NI26_01570 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

agy:ATC03_01400 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

apn:Asphe3_04250 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

saq:Sare_4352 pf:DNA_ligase_A_M pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

vma:VAB18032_06515 pf:DNA_ligase_A_M pf:DUF5415 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

satk:SA2016_3491 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

gor:KTR9_5426 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

rfa:A3L23_05167 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

sgb:WQO_00280 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

arq:BWQ92_08275 pf:LigD_Prim-Pol pf:DNA_primase_S pf:DUF4031 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

kfl:Kfla_4705 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

pseh:XF36_28235 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

amd:AMED_3255 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

amm:AMES_3220 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

amn:RAM_16560 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

amz:B737_3220 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

rhs:A3Q41_04980 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

ams:AMIS_3570 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

brx:BH708_17365 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

srw:TUE45_00866 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mye:AB431_24205 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

mki:LH54_09045 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mkn:MKAN_09095 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mks:LG40_08950 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

sco:SCO7345 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

slv:SLIV_02570 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mft:XA26_13320 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Thr_synth_N pf:DNA_ligase_A_C

myv:G155_06665 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Thr_synth_N pf:DNA_ligase_A_C

mva:Mvan_4915 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mhos:CXR34_07730 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmae:MMARE11_43850 pf:LigD_Prim-Pol pf:DNA_primase_S pf:DUF6866_C pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmi:MMAR_4573 pf:LigD_Prim-Pol pf:DNA_primase_S pf:DUF6866_C pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mul:MUL_4434 pf:LigD_Prim-Pol pf:DNA_primase_S pf:DUF6866_C pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

sci:B446_04080 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

ase:ACPL_520 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

mli:MULP_04790 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mph:MLP_04810 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

brz:CFK38_15900 pf:LigD_Prim-Pol pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mrh:MycrhN_3288 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mvq:MYVA_4735 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Big_4 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Thr_synth_N pf:DNA_ligase_A_C

mphl:MPHLCCUG_00892 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Big_4 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:Thr_synth_N pf:DNA_ligase_A_C

rhw:BFN03_13610 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

psul:AU252_08335 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

art:Arth_0294 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C