Search common motifs in selected sequences


  
Motifs : pf:3HBOH3HB-oligomer hydrolase (3HBOH)
 pf:AAA_19AAA domain
 pf:AAA_22AAA domain
 pf:AAA_30AAA domain
 pf:AHJR-like
 pf:CRR42-like
 pf:Cas_Cas4Domain of unknown function DUF83
 pf:Chordopox_G2Chordopoxvirus protein G2
 pf:Csa1
 pf:DEADDEAD/DEAH box helicase
 pf:DEAD_2DEAD_2
 pf:DUF1473Protein of unknown function (DUF1473)
 pf:DUF2659Protein of unknown function (DUF2659)
 pf:DUF2800Protein of unknown function (DUF2800)
 pf:DUF3333Domain of unknown function (DUF3333)
 pf:DUF3799PDDEXK-like domain of unknown function (DUF3799)
 pf:DUF5514
 pf:DUF6724
 pf:DUF6854
 pf:DesulfoferrodoxDesulfoferrodoxin
 pf:Dicty_CTDCDictyostelium (slime mold) repeat
 pf:Dna2DNA replication factor Dna2
 pf:Exo5Exonuclease V - a 5' deoxyribonuclease
 pf:HSDR_N_2Type I restriction enzyme R protein N terminus (HSDR_N)
 pf:HSP70Hsp70 protein
 pf:Helicase_CHelicase conserved C-terminal domain
 pf:Helicase_C_2Helicase C-terminal domain
 pf:HjcArchaeal holliday junction resolvase (hjc)
 pf:ITPK1_preATP-grasp
 pf:Ig_GlcNase
 pf:KIAA1328Uncharacterised protein KIAA1328
 pf:KfrA_NPlasmid replication region DNA-binding N-term
 pf:Mrr_catRestriction endonuclease
 pf:Myco_19_kDaMycobacterium 19 kDa lipoprotein antigen
 pf:NACHTNACHT domain
 pf:NarE
 pf:PDDEXK_1PD-(D/E)XK nuclease superfamily
 pf:PDDEXK_10PD-(D/E)XK nuclease superfamily
 pf:PDDEXK_3PD-(D/E)XK nuclease superfamily
 pf:PDDEXK_9PD-(D/E)XK nuclease superfamily
 pf:PTS_EIIA_1phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
 pf:Paf67RNA polymerase I-associated factor PAF67
 pf:PhoHPhoH-like protein
 pf:Pox_VP8_L4RPoxvirus nucleic acid binding protein VP8/L4R
 pf:RE_TdeIIIType II restriction endonuclease, TdeIII
 pf:ResIIIType III restriction enzyme, res subunit
 pf:Rod_cone_degenProgressive rod-cone degeneration
 pf:SfsASugar fermentation stimulation protein
 pf:Shugoshin_NShugoshin N-terminal coiled-coil region
 pf:Sigma54_activ_2Sigma-54 interaction domain
 pf:TGT_C1C1 domain of tRNA-guanine transglycosylase dimerisation
 pf:Tox-REase-9Restriction endonuclease fold toxin 9
 pf:UvrD-helicaseUvrD/REP helicase N-terminal domain
 pf:UvrD_CUvrD-like helicase C-terminal domain
 pf:UvrD_C_2UvrD-like helicase C-terminal domain
 pf:VasX_N
 pf:Viral_helicase1Viral (Superfamily 1) RNA helicase
 pf:WSS_VPWhite spot syndrome virus structural envelope protein VP
 pf:XisHXisH protein
 pf:YqaJYqaJ-like viral recombinase domain
 pf:Zn-ribbon_8Zinc ribbon domain

tcb:TCARB_0632 pf:PDDEXK_1

thb:N186_07740 pf:PDDEXK_1

tpe:Tpen_1602 pf:PDDEXK_1

apo:Arcpr_1431 pf:PDDEXK_1

sacn:SacN8_01340 pf:Chordopox_G2 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

sacr:SacRon12I_01340 pf:Chordopox_G2 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

sai:Saci_0274 pf:Chordopox_G2 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

sull:EWF20_13855 pf:Cas_Cas4 pf:YqaJ pf:PDDEXK_3 pf:PDDEXK_1

sacs:SUSAZ_01385 pf:Chordopox_G2 pf:PDDEXK_3 pf:PDDEXK_1 pf:Cas_Cas4 pf:AHJR-like

soh:D1869_12795 pf:Cas_Cas4 pf:YqaJ pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

sto:STK_23310 pf:Cas_Cas4 pf:YqaJ pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

aman:B6F84_09330 pf:RE_TdeIII pf:PDDEXK_3 pf:SfsA pf:PDDEXK_1 pf:Cas_Cas4 pf:PDDEXK_9

asul:DFR86_08015 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:Cas_Cas4 pf:PDDEXK_1 pf:SfsA

sic:SiL_1967 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sih:SiH_2061 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sir:SiRe_1994 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sia:M1425_2113 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:DUF6724

sid:M164_2119 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:DUF6724

sii:LD85_2382 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sim:M1627_2195 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:DUF6724

sin:YN1551_0674 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sis:LS215_2278 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

siy:YG5714_2242 pf:Cas_Cas4 pf:PDDEXK_1 pf:RE_TdeIII pf:PDDEXK_3 pf:PDDEXK_10 pf:DUF6724

sshi:J5U23_00249 pf:Cas_Cas4 pf:Dna2 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3 pf:WSS_VP pf:DUF6724

sule:GFS03_11540 pf:Cas_Cas4 pf:Dna2 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

sol:Ssol_0985 pf:Cas_Cas4 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

sso:SSO0001 pf:Cas_Cas4 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

ssoa:SULA_1018 pf:Cas_Cas4 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

ssof:SULC_1019 pf:Cas_Cas4 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

ssol:SULB_1020 pf:Cas_Cas4 pf:RE_TdeIII pf:PDDEXK_1 pf:PDDEXK_3

abri:DFR85_06340 pf:Pox_VP8_L4R pf:Cas_Cas4 pf:PDDEXK_1 pf:SfsA pf:PDDEXK_9 pf:PDDEXK_3 pf:AHJR-like pf:ITPK1_preATP-grasp

scas:SACC_31870 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

csty:KN1_07130 pf:PDDEXK_1 pf:PDDEXK_3 pf:PDDEXK_1

aamb:D1866_00125 pf:Cas_Cas4 pf:PTS_EIIA_1 pf:PDDEXK_3 pf:PDDEXK_1 pf:SfsA pf:PDDEXK_9 pf:AHJR-like

sazo:D1868_08475 pf:DUF2659 pf:PDDEXK_3 pf:PDDEXK_1

sula:BFU36_05840 pf:Cas_Cas4 pf:DUF3333 pf:PDDEXK_3 pf:PDDEXK_1 pf:AHJR-like

tag:Tagg_0099 pf:Cas_Cas4 pf:Dna2 pf:PDDEXK_1 pf:PDDEXK_3 pf:PDDEXK_1 pf:Myco_19_kDa

iag:Igag_1219 pf:Paf67 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1

acih:HS5_24440 pf:RE_TdeIII pf:PDDEXK_3 pf:Cas_Cas4 pf:PDDEXK_1 pf:SfsA pf:PDDEXK_9 pf:AHJR-like

pare:PYJP_03400 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:Desulfoferrodox

shc:Shell_1273 pf:KIAA1328 pf:Dna2 pf:PDDEXK_3 pf:Csa1 pf:PDDEXK_1 pf:DUF3799

hbu:Hbut_0944 pf:PDDEXK_3 pf:PDDEXK_1 pf:Cas_Cas4

dfd:Desfe_1099 pf:PDDEXK_3 pf:Tox-REase-9 pf:PDDEXK_1 pf:Hjc

smr:Smar_1195 pf:KIAA1328 pf:Dna2 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1 pf:DUF3799

aho:Ahos_1052 pf:PTS_EIIA_1 pf:PDDEXK_3 pf:PDDEXK_1 pf:Cas_Cas4 pf:SfsA pf:PDDEXK_9 pf:Mrr_cat pf:AHJR-like pf:Hjc

dka:DKAM_0981 pf:PDDEXK_3 pf:Tox-REase-9 pf:PDDEXK_1 pf:Hjc

pdl:Pyrde_1677 pf:PDDEXK_3 pf:PDDEXK_1 pf:PDDEXK_9 pf:Cas_Cas4 pf:HSDR_N_2

ffo:FFONT_1307 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1

pfm:Pyrfu_0578 pf:Dna2 pf:Cas_Cas4 pf:PDDEXK_3 pf:PDDEXK_1

dmu:Desmu_0121 pf:Dna2 pf:Cas_Cas4 pf:PDDEXK_3 pf:Tox-REase-9 pf:PDDEXK_1

thg:TCELL_0595 pf:Cas_Cas4 pf:Tox-REase-9 pf:PDDEXK_1 pf:PDDEXK_3

pabi:PABY_16740 pf:PDDEXK_1 pf:PDDEXK_9 pf:Cas_Cas4 pf:PDDEXK_3

vg:26644731 pf:PDDEXK_1 pf:PDDEXK_3 pf:Cas_Cas4 pf:SfsA pf:PDDEXK_9 pf:Mrr_cat pf:AHJR-like pf:XisH pf:Shugoshin_N

memj:MJ1HA_1956 pf:Dna2 pf:PDDEXK_1

ccai:NAS2_1530 pf:Cas_Cas4 pf:PDDEXK_1 pf:PDDEXK_3


pmx:PERMA_A0049 pf:DUF1473 pf:YqaJ pf:PDDEXK_1

thf:MA03_04855 pf:Cas_Cas4 pf:PDDEXK_1 pf:Exo5

thel:IG193_02990 pf:Cas_Cas4 pf:PDDEXK_1 pf:Exo5

mten:GWK48_07095 pf:PDDEXK_1 pf:PDDEXK_3 pf:3HBOH

mjn:MjAS7_1038 pf:PDDEXK_1 pf:TGT_C1 pf:PDDEXK_3 pf:Cas_Cas4

sacd:HS1genome_1074 pf:PDDEXK_1 pf:PDDEXK_3 pf:3HBOH

mcn:Mcup_1709 pf:PDDEXK_1 pf:Cas_Cas4

mhk:DFR87_04210 pf:Rod_cone_degen pf:CRR42-like pf:PDDEXK_1 pf:3HBOH

nhu:H0264_20595 pf:PDDEXK_1 pf:DUF2800 pf:Cas_Cas4

nmo:Nmlp_2170 pf:PDDEXK_1 pf:Cas_Cas4

syl:AWQ21_14975 pf:UvrD-helicase pf:Sigma54_activ_2 pf:AAA_30 pf:AAA_19 pf:AAA_22 pf:UvrD_C pf:UvrD_C_2 pf:Viral_helicase1 pf:UvrD_C_2 pf:PDDEXK_1 pf:DUF3799 pf:Cas_Cas4

noz:DMB37_05920 pf:PDDEXK_1 pf:DUF2800 pf:Cas_Cas4

nya:LTV02_13675 pf:PDDEXK_1 pf:DUF2800 pf:Dna2 pf:Cas_Cas4

tpaf:A3L08_04700 pf:Dna2 pf:PDDEXK_1 pf:VasX_N

asg:FB03_01900 pf:DUF2800 pf:PDDEXK_1 pf:Cas_Cas4

atim:CYJ17_0007125 pf:DUF2800 pf:PDDEXK_1 pf:Cas_Cas4

thm:CL1_0382 pf:PDDEXK_1

tprf:A3L09_05940 pf:Dna2 pf:PDDEXK_1 pf:NarE pf:VasX_N

snk:CP967_28150 pf:PDDEXK_1 pf:DUF2800

cia:BEN51_12670 pf:ResIII pf:DEAD pf:PhoH pf:DEAD_2 pf:Ig_GlcNase pf:Helicase_C pf:Helicase_C_2

sgj:IAG43_05615 pf:PDDEXK_1 pf:DUF2800

pyr:P186_0087 pf:PDDEXK_1 pf:Cas_Cas4 pf:PDDEXK_1 pf:PDDEXK_3

fpl:Ferp_0803 pf:Mrr_cat pf:PDDEXK_3

ima:PO878_06820 pf:PDDEXK_1

sfq:C7J90_11000 pf:PDDEXK_1

prz:GZH47_17460 pf:ResIII pf:DEAD pf:PhoH pf:DEAD_2 pf:KfrA_N pf:Helicase_C pf:Helicase_C_2

plut:EI981_05480 pf:DUF6854 pf:ResIII pf:DEAD pf:DEAD_2 pf:Helicase_C_2

sqz:FQU76_05025 pf:PDDEXK_1 pf:DUF2800

mad:HP15_3721 pf:DUF3799 pf:ResIII pf:DEAD pf:DEAD_2 pf:Helicase_C_2

hno:LT974_16425 pf:PDDEXK_1 pf:Cas_Cas4 pf:Zn-ribbon_8

pan:PODANSg3533 pf:HSP70 pf:Dicty_CTDC

pphn:HU825_14305 pf:ResIII pf:DEAD pf:DEAD_2 pf:Helicase_C_2 pf:Helicase_C

ppsp:QC763_121850 pf:HSP70 pf:Dicty_CTDC

sdeg:GOM96_01300 pf:ResIII pf:DEAD pf:DEAD_2 pf:Helicase_C_2 pf:Helicase_C

snw:BBN63_28300 pf:PDDEXK_1 pf:DUF2800

neq:NEQ549 pf:PDDEXK_1 pf:Cas_Cas4 pf:Csa1 pf:Cas_Cas4

pste:PSTEL_25595 pf:DEAD pf:DEAD_2 pf:Helicase_C pf:Helicase_C_2

cbil:EUBC25_02530 pf:PDDEXK_1 pf:ResIII pf:DEAD pf:PhoH pf:DEAD_2 pf:DUF5514 pf:Helicase_C_2

bpah:QA639_12520 pf:UvrD-helicase pf:AAA_30 pf:AAA_19 pf:NACHT pf:UvrD_C pf:UvrD_C pf:UvrD_C_2 pf:PDDEXK_1

mari:ACP86_09200 pf:DUF3799 pf:ResIII pf:DEAD pf:DEAD_2 pf:Helicase_C_2

pof:GS400_15155 pf:PDDEXK_1 pf:ResIII pf:DEAD pf:PhoH pf:DEAD_2 pf:Helicase_C_2


gtt:GUITHDRAFT_75675 pf:Exo5 pf:PDDEXK_1 pf:Exo5 pf:Exo5

pfuw:KF707C_35890 pf:ResIII pf:DEAD pf:DEAD_2 pf:Helicase_C_2 pf:Helicase_C

sgk:PET44_07190 pf:PDDEXK_1 pf:DUF2800