Search common motifs in selected sequences


  
Motifs : pf:A2L_zn_ribbonA2L zinc ribbon domain
 pf:AAA_14AAA domain
 pf:AAA_16AAA ATPase domain
 pf:AAA_18AAA domain
 pf:AAA_22AAA domain
 pf:AAA_24AAA domain
 pf:AAA_26AAA domain
 pf:AAA_30AAA domain
 pf:AAA_31AAA domain
 pf:AAA_33AAA domain
 pf:ABC_tranABC transporter
 pf:APG6_N
 pf:APS_kinaseAdenylylsulphate kinase
 pf:ATP_bind_1Conserved hypothetical ATP binding protein
 pf:ArdAAntirestriction protein (ArdA)
 pf:ArsA_ATPaseAnion-transporting ATPase
 pf:BRCTBRCA1 C Terminus (BRCT) domain
 pf:BRCT_2BRCT domain, a BRCA1 C-terminus domain
 pf:Bacteriocin_IIiAureocin-like type II bacteriocin
 pf:CBP_BcsQCellulose biosynthesis protein BcsQ
 pf:CLP1_PmRNA cleavage and polyadenylation factor CLP1 P-loop
 pf:COG7Golgi complex component 7 (COG7)
 pf:CbiACobQ/CobB/MinD/ParA nucleotide binding domain
 pf:Chlor_dismutaseChlorite dismutase
 pf:ChpXYCO2 hydration protein (ChpXY)
 pf:ComFBLate competence development protein ComFB
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_A_NDNA ligase N terminus
 pf:DNA_ligase_IVDNA ligase IV
 pf:DNA_ligase_adenNAD-dependent DNA ligase adenylation domain
 pf:DNA_pol3_alphaBacterial DNA polymerase III alpha subunit
 pf:DNA_pol3_finger
 pf:DUF1128Protein of unknown function (DUF1128)
 pf:DUF1617Protein of unknown function (DUF1617)
 pf:DUF3303Protein of unknown function (DUF3303)
 pf:DUF3386Protein of unknown function (DUF3386)
 pf:DUF3801Protein of unknown function (DUF3801)
 pf:DUF5009Domain of unknown function (DUF5009)
 pf:DUF5332
 pf:DUF5741
 pf:DUF5906
 pf:DUF87Domain of unknown function DUF87
 pf:FANCI_S2FANCI solenoid 2
 pf:FecR_C
 pf:Fer4_NifH4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
 pf:FtsX_ECD
 pf:G-alphaG-protein alpha subunit
 pf:G1_gp67_C
 pf:GFO_IDH_MocA_C2
 pf:GrlRT3SS negative regulator,GrlR
 pf:HHH_6Helix-hairpin-helix motif
 pf:HTH_17Helix-turn-helix domain
 pf:HVO_2753_ZBP
 pf:Heme_oxygenaseHeme oxygenase
 pf:KAP_NTPaseKAP family P-loop domain
 pf:LIG3_BRCTDNA ligase 3 BRCT domain
 pf:LigD_NDNA polymerase Ligase (LigD)
 pf:LigD_Prim-Pol
 pf:Lig_C
 pf:LysMLysM domain
 pf:MCM_C
 pf:MapZ_EC1
 pf:MeaB
 pf:NACHTNACHT domain
 pf:NB-ARCNB-ARC domain
 pf:NTPase_1NTPase
 pf:Oxidored_nitroNitrogenase component 1 type Oxidoreductase
 pf:PHA02142
 pf:PHPPHP domain
 pf:PNKP_ligasePNKP adenylyltransferase domain, ligase domain
 pf:PSP1PSP1 C-terminal conserved region
 pf:PTCB-BRCTtwin BRCT domain
 pf:ParANUBPL iron-transfer P-loop NTPase
 pf:Pesticin_RB
 pf:RAPRAP domain
 pf:RNA_lig_T4_1RNA ligase
 pf:RNA_ligaseRNA ligase
 pf:Radical_SAMRadical SAM superfamily
 pf:Ribosomal_L7AeRibosomal protein L7Ae/L30e/S12e/Gadd45 family
 pf:Ribosomal_S17eRibosomal S17
 pf:Ribosomal_S5_CRibosomal protein S5, C-terminal domain
 pf:RraBRegulator of ribonuclease activity B
 pf:Rv2175c_wHTH
 pf:SRP54SRP54-type protein, GTPase domain
 pf:SepSecSO-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS
 pf:SpoIIAA-likeSpoIIAA-like
 pf:Thymidylate_kinThymidylate kinase
 pf:UPF0175Uncharacterised protein family (UPF0175)
 pf:YjdM_Zn_Ribbon
 pf:fvmRadSAM-pep
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain
 pf:nSTAND3

thm:CL1_0630 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

the:GQS_04900 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

tha:TAM4_12 pf:GrlR pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C pf:DUF3386

ton:TON_0064 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

tga:TGAM_2005 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:DUF3303 pf:Lig_C

tko:TK1545 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

tnu:BD01_2051 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

ths:TES1_0272 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

tba:TERMP_00178 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:RNA_lig_T4_1 pf:ArdA pf:Lig_C

tlt:OCC_08874 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

tsi:TSIB_1335 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:RNA_lig_T4_1 pf:Lig_C

pya:PYCH_15530 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:SepSecS pf:Lig_C

pyn:PNA2_1142 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:SpoIIAA-like pf:Lig_C

pfi:PFC_01005 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

pfu:PF0353 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

pab:PAB1020 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:SpoIIAA-like pf:Lig_C pf:PSP1

pys:Py04_0546 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

pho:PH0498 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:DUF1128 pf:SpoIIAA-like pf:Lig_C

tal:Thal_0814 pf:DNA_ligase_A_M pf:DNA_ligase_aden pf:RNA_ligase pf:Lig_C

trd:THERU_01860 pf:DNA_ligase_A_M pf:RNA_ligase pf:Ribosomal_S17e pf:Lig_C

hte:Hydth_1300 pf:DNA_ligase_A_M pf:RNA_ligase pf:Ribosomal_L7Ae pf:Lig_C

hth:HTH_1308 pf:DNA_ligase_A_M pf:RNA_ligase pf:Ribosomal_L7Ae pf:Lig_C

aae:aq_1106 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C pf:APG6_N pf:FecR_C

noc:Noc_1413 pf:RNA_ligase pf:fvmRadSAM-pep pf:Lig_C

tni:TVNIR_2892 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

nhl:Nhal_1642 pf:RNA_ligase pf:Lig_C

min:Minf_0008 pf:RNA_ligase pf:GFO_IDH_MocA_C2 pf:Lig_C

tid:Thein_0777 pf:RNA_ligase pf:Lig_C pf:Heme_oxygenase pf:FtsX_ECD

top:TOPB45_0977 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mma:MM_1307 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mmaz:MmTuc01_1355 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

aeh:Mlg_2553 pf:RNA_ligase pf:Lig_C

mmp:MMP0376 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:FANCI_S2

mfe:Mefer_1305 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mja:MJ_0414 pf:DNA_ligase_A_M pf:RNA_ligase pf:G1_gp67_C pf:Lig_C

mzh:Mzhil_0017 pf:HTH_17 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mba:Mbar_A0970 pf:Pesticin_RB pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

hha:Hhal_0982 pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

mmd:GYY_01940 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:FANCI_S2

mev:Metev_0019 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mmx:MmarC6_0534 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:FANCI_S2

mtp:Mthe_0300 pf:RNA_ligase pf:Lig_C

mig:Metig_0531 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:DUF5741

mfs:MFS40622_1683 pf:MapZ_EC1 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mfv:Mfer_0241 pf:HVO_2753_ZBP pf:A2L_zn_ribbon pf:YjdM_Zn_Ribbon pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C pf:MCM_C

mvu:Metvu_0821 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C


tkm:TK90_1908 pf:DNA_ligase_A_M pf:RNA_ligase pf:ComFB pf:Lig_C

mif:Metin_0052 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mmz:MmarC7_1374 pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF1617 pf:Lig_C pf:FANCI_S2

mmq:MmarC5_1262 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mcj:MCON_2015 pf:LysM pf:RNA_ligase pf:Lig_C

mok:Metok_0562 pf:DNA_ligase_A_M pf:RNA_ligase pf:RAP pf:Lig_C pf:DUF3801

mhi:Mhar_0357 pf:RNA_ligase pf:Lig_C


mae:Maeo_0656 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mmg:MTBMA_c16060 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

hti:HTIA_1598 pf:RNA_ligase pf:Lig_C

mhz:Metho_2423 pf:RNA_ligase pf:DNA_ligase_A_M pf:RNA_lig_T4_1 pf:Lig_C


mmh:Mmah_0013 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mvn:Mevan_1364 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

hma:rrnAC2266 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

hxa:Halxa_4078 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

iho:Igni_1251 pf:DNA_ligase_A_M pf:RNA_ligase pf:Chlor_dismutase pf:Lig_C pf:RraB

mpy:Mpsy_1786 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

apo:Arcpr_1305 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:DUF5009

ast:Asulf_02177 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mbu:Mbur_1758 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

smr:Smar_1436 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

nou:Natoc_2587 pf:RNA_ligase pf:Lig_C

mew:MSWAN_2130 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

mka:MK0528 pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C

shc:Shell_1013 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

pfm:Pyrfu_1465 pf:Rv2175c_wHTH pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C pf:Radical_SAM pf:Bacteriocin_IIi

hut:Huta_1442 pf:RNA_ligase pf:Lig_C

meth:MBMB1_1775 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

ave:Arcve_1477 pf:DNA_ligase_A_M pf:RNA_ligase pf:RNA_lig_T4_1 pf:Lig_C

hbo:Hbor_30630 pf:RNA_ligase pf:Lig_C

mel:Metbo_0299 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

nmg:Nmag_1102 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C

fpl:Ferp_1330 pf:DNA_ligase_A_M pf:RNA_ligase pf:Lig_C pf:COG7

ffo:FFONT_1246 pf:UPF0175 pf:DNA_ligase_A_M pf:RNA_ligase pf:BRCT pf:Lig_C

hbu:Hbut_1550 pf:RNA_ligase pf:DNA_ligase_A_M pf:Lig_C pf:Oxidored_nitro

ape:APE_1567.1 pf:RNA_ligase pf:Lig_C

acj:ACAM_0981 pf:RNA_ligase pf:Lig_C

npe:Natpe_1716 pf:RNA_ligase pf:Lig_C

htu:Htur_2520 pf:RNA_ligase pf:Lig_C

nat:NJ7G_1163 pf:RNA_ligase pf:Lig_C

msd:MYSTI_06179 pf:PHA02142 pf:RNA_ligase

tmo:TMO_b0276 pf:RNA_ligase

dpp:DICPUDRAFT_43460 pf:PHA02142 pf:RNA_ligase

spu:582203 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:PNKP_ligase pf:DNA_ligase_A_C pf:BRCT pf:BRCT_2 pf:DNA_ligase_IV pf:PTCB-BRCT pf:BRCT pf:BRCT_2 pf:LIG3_BRCT

upa:UPA3_0433 pf:PHP pf:DNA_pol3_alpha pf:DNA_pol3_finger pf:HHH_6

uur:UU415 pf:PHP pf:DNA_pol3_alpha pf:DNA_pol3_finger pf:HHH_6

fac:FACI_IFERC01G0716 pf:DUF5332 pf:ChpXY

bbw:BDW_07900 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol

net:Neut_1967 pf:RNA_ligase pf:RNA_lig_T4_1

cpas:Clopa_2129 pf:Fer4_NifH pf:G-alpha pf:AAA_24 pf:NTPase_1 pf:DUF87 pf:MeaB pf:ArsA_ATPase pf:nSTAND3 pf:AAA_18 pf:SRP54 pf:ABC_tran pf:APS_kinase pf:NACHT pf:KAP_NTPase pf:NB-ARC pf:AAA_14 pf:AAA_22 pf:CbiA pf:CBP_BcsQ pf:AAA_30 pf:AAA_16 pf:AAA_31 pf:ParA pf:ATP_bind_1 pf:AAA_33 pf:DUF5906 pf:CLP1_P pf:Thymidylate_kin pf:AAA_26

dda:Dd703_3690 pf:RNA_ligase

xla:394389 pf:DNA_ligase_A_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:BRCT pf:BRCT_2 pf:Ribosomal_S5_C pf:DNA_ligase_IV pf:BRCT pf:BRCT_2