Search common motifs in selected sequences


  
Motifs : pf:ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domain
 pf:Ada3Histone acetyltransferases subunit 3
 pf:Aminotran_4Amino-transferase class IV
 pf:Anticodon_1Anticodon-binding domain of tRNA
 pf:BrxB
 pf:CAC1F_CVoltage-gated calcium channel subunit alpha, C-term
 pf:CAP_CAdenylate cyclase associated (CAP) C terminal
 pf:CAP_NAdenylate cyclase associated (CAP) N terminal
 pf:CCSAPCentriole, cilia and spindle-associated
 pf:COX1Cytochrome C and Quinol oxidase polypeptide I
 pf:Ca_chan_IQVoltage gated calcium channel IQ domain
 pf:DDE_2Bacteriophage Mu transposase
 pf:DDE_3DDE superfamily endonuclease
 pf:DHquinase_IIDehydroquinase class II
 pf:DKNYYDKNYY family
 pf:DUF3715Protein of unknown function (DUF3715)
 pf:DUF4179Domain of unknown function (DUF4179)
 pf:DUF4962Domain of unknown function (DUF4962)
 pf:DusDihydrouridine synthase (Dus)
 pf:EF-hand_9EF-hand domain
 pf:Endonuc-PvuIIRestriction endonuclease PvuII
 pf:FAM176FAM176 family
 pf:FANCL_CFANCL C-terminal domain
 pf:Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domain
 pf:ForkheadForkhead domain
 pf:GBBH-like_N
 pf:GPHHVoltage-dependent L-type calcium channel, IQ-associated
 pf:Ge1_WD40WD40 region of Ge1, enhancer of mRNA-decapping protein
 pf:Glu_cys_ligaseGlutamate-cysteine ligase
 pf:Glyco_trans_1_4Glycosyl transferases group 1
 pf:Glyco_transf_61
 pf:HTH_19Helix-turn-helix domain
 pf:HTH_24Winged helix-turn-helix DNA-binding
 pf:HTH_25Helix-turn-helix domain
 pf:HTH_26Cro/C1-type HTH DNA-binding domain
 pf:HTH_3Helix-turn-helix
 pf:HTH_31Helix-turn-helix domain
 pf:HTH_37Helix-turn-helix domain
 pf:HTH_Crp_2Crp-like helix-turn-helix domain
 pf:HTH_Tnp_Mu_1Mu DNA-binding domain
 pf:HTH_Tnp_Mu_2Mu DNA binding, I gamma subdomain
 pf:HXXSHHProtein of unknown function (DUF1552)
 pf:InhA-like_VEG
 pf:Ion_transIon transport protein
 pf:KRABKRAB box
 pf:Kre9_KNH
 pf:Lactamase_BMetallo-beta-lactamase superfamily
 pf:Lipase_GDSLGDSL-like Lipase/Acylhydrolase
 pf:Lipase_GDSL_2GDSL-like Lipase/Acylhydrolase family
 pf:MarRMarR family
 pf:MetallophosCalcineurin-like phosphoesterase
 pf:Mu-transpos_CMu transposase, C-terminal
 pf:NBCH_WD40
 pf:OEPOuter membrane efflux protein
 pf:PDZPDZ domain (Also known as DHR or GLGF)
 pf:PHDPHD-finger
 pf:PKD_channelPolycystin cation channel
 pf:PPDFLDifferentiation and proliferation regulator
 pf:P_proproteinProprotein convertase P-domain
 pf:PepSYPeptidase propeptide and YPEB domain
 pf:Phage_RBD_prop
 pf:Por_Secre_tail
 pf:Pro_isomeraseCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
 pf:Reprolysin_2Metallo-peptidase family M12B Reprolysin-like
 pf:Reprolysin_3Metallo-peptidase family M12B Reprolysin-like
 pf:Reprolysin_4Metallo-peptidase family M12B Reprolysin-like
 pf:Reprolysin_5Metallo-peptidase family M12
 pf:Retrotran_gag_2gag-polypeptide of LTR copia-type
 pf:Retrotrans_gagRetrotransposon gag protein
 pf:Rho_NRho termination factor, N-terminal domain
 pf:SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle
 pf:SRP54SRP54-type protein, GTPase domain
 pf:SSXRDSSXRD motif
 pf:Sigma70_r4Sigma-70, region 4
 pf:T2SSBType II secretion system protein B
 pf:T4SS-DNA_transfType IV secretory system Conjugative DNA transfer
 pf:TBCCTubulin binding cofactor C
 pf:TMEM51Transmembrane protein 51
 pf:TSP_3Thrombospondin type 3 repeat
 pf:TauDTaurine catabolism dioxygenase TauD, TfdA family
 pf:TraG-D_CTraM recognition site of TraD and TraG
 pf:TrefoilTrefoil (P-type) domain
 pf:TrwB_AAD_bindType IV secretion-system coupling protein DNA-binding domain
 pf:Tugs
 pf:WCCHWCCH motif
 pf:WD40WD domain, G-beta repeat
 pf:Xre-like-HTH
 pf:Yop-YscD_pplInner membrane component of T3SS, periplasmic domain
 pf:Zn-ribbon_8Zinc ribbon domain
 pf:dUTPasedUTPase
 pf:rveIntegrase core domain
 pf:tRNA-synt_1tRNA synthetases class I (I, L, M and V)
 pf:tRNA-synt_1_2Leucyl-tRNA synthetase, Domain 2
 pf:tRNA-synt_1etRNA synthetases class I (C) catalytic domain
 pf:tRNA-synt_1gtRNA synthetases class I (M)
 pf:zf-C2HC5Putative zinc finger motif, C2HC5-type
 pf:zf-HC5HC2HPHD-like zinc-binding domain
 pf:zf-HC5HC2H_2PHD-zinc-finger like domain
 pf:zinc_ribbon_15zinc-ribbon family

vei:Veis_3517 pf:Endonuc-PvuII

tig:THII_1240 pf:Endonuc-PvuII

mrb:Mrub_2575 pf:HTH_37 pf:HTH_31 pf:HTH_19 pf:HTH_26 pf:HTH_3 pf:MarR pf:HTH_25 pf:HTH_Crp_2 pf:Xre-like-HTH pf:Tugs pf:Endonuc-PvuII

mre:K649_09665 pf:HTH_37 pf:HTH_31 pf:HTH_19 pf:HTH_26 pf:HTH_3 pf:MarR pf:HTH_25 pf:HTH_Crp_2 pf:Xre-like-HTH pf:Tugs pf:Endonuc-PvuII

seeb:SEEB0189_019940 pf:Endonuc-PvuII

sek:SSPA3987 pf:Endonuc-PvuII

spt:SPA4291 pf:Endonuc-PvuII

pwa:Pecwa_0456 pf:Endonuc-PvuII

nso:NIASO_17470 pf:Endonuc-PvuII

glp:Glo7428_2601 pf:HTH_31 pf:HTH_19 pf:HTH_3 pf:HTH_26 pf:Sigma70_r4 pf:Endonuc-PvuII

anb:ANA_C11008 pf:HTH_31 pf:HTH_19 pf:HTH_3 pf:HTH_26 pf:HTH_24 pf:Sigma70_r4 pf:Endonuc-PvuII

len:LEP3755_11280 pf:Endonuc-PvuII

oni:Osc7112_1184 pf:HTH_37 pf:HTH_31 pf:HTH_19 pf:HTH_26 pf:HTH_3 pf:Endonuc-PvuII pf:Rho_N

wcl:WCLE_008070 pf:HTH_37 pf:HTH_31 pf:HTH_19 pf:HTH_26 pf:HTH_3 pf:Endonuc-PvuII


zma:103643936 pf:CAP_N pf:CAP_C pf:TBCC

pls:VT03_31860 pf:HXXSHH pf:Endonuc-PvuII



sesp:BN6_16030 pf:Aminotran_4



mgr:MGG_05731 pf:NBCH_WD40 pf:WD40 pf:ANAPC4_WD40 pf:Ge1_WD40 pf:Pro_isomerase

sbi:8063357 pf:CAP_N pf:CAP_C pf:TBCC

ats:109773301 pf:Retrotran_gag_2 pf:Retrotrans_gag pf:DUF3715

sita:101768909 pf:CAP_N pf:SRP54 pf:CAP_C pf:TBCC

xne:XNC1_4021 pf:OEP pf:OEP pf:PepSY

xnm:XNC2_3874 pf:OEP pf:OEP pf:PepSY

fpd:CTM68_02455 pf:DKNYY pf:DKNYY pf:TMEM51

led:BBK82_02360 pf:Aminotran_4

camu:CA2015_2228 pf:COX1

aey:CDG81_16330 pf:Aminotran_4

all:CRK55664 pf:Aminotran_4

egu:105058146 pf:CAP_N pf:CAP_C pf:TBCC




bbd:Belba_3790 pf:COX1

obr:102719367 pf:CAP_N pf:SRP54 pf:CAP_C pf:TBCC

pmb:A9601_07251 pf:Lipase_GDSL pf:Lipase_GDSL_2

vg:16797576 pf:Glu_cys_ligase pf:Phage_RBD_prop pf:InhA-like_VEG


btr:BT_1256 pf:HTH_Tnp_Mu_1 pf:HTH_Tnp_Mu_2 pf:DDE_2 pf:rve pf:DDE_3 pf:Mu-transpos_C

btx:BM1374166_02286 pf:HTH_Tnp_Mu_1 pf:HTH_Tnp_Mu_2 pf:DDE_2 pf:rve pf:DDE_3 pf:Mu-transpos_C

pmh:P9215_07551 pf:Lipase_GDSL pf:Lipase_GDSL_2 pf:Endonuc-PvuII

aaf:AURANDRAFT_36241 pf:Dus

prc:EW14_0744 pf:Lipase_GDSL pf:Lipase_GDSL_2

lut:Lupro_07645 pf:Reprolysin_4 pf:Reprolysin_5 pf:Reprolysin_2 pf:Reprolysin_3 pf:Kre9_KNH pf:DUF4962 pf:P_proprotein pf:TSP_3 pf:TSP_3 pf:Por_Secre_tail


pfk:PFAS1_13510 pf:GBBH-like_N pf:GBBH-like_N pf:TauD

pmum:103343348 pf:Metallophos

pper:18786059 pf:Metallophos pf:Lactamase_B

psoj:PHYSODRAFT_320134 pf:PDZ pf:Ada3 pf:zf-HC5HC2H_2 pf:zf-HC5HC2H pf:FANCL_C pf:PHD pf:WCCH


ghi:107930959 pf:Glyco_transf_61

ini:109161806 pf:CAP_N pf:CAP_C pf:TBCC

oaa:100076927 pf:Forkhead


bjs:MY9_0711 pf:DUF4179 pf:Endonuc-PvuII

cin:101243486 pf:Fibrinogen_C pf:Trefoil

cmq:B840_08525 pf:Aminotran_4 pf:Glyco_trans_1_4

jre:109011191 pf:CAP_N pf:CAP_C pf:TBCC

phd:102332244 pf:CCSAP

pin:Ping_0545 pf:SBP_bac_5

pmi:PMT9312_0670 pf:Lipase_GDSL pf:Lipase_GDSL_2

cei:CEPID_08545 pf:Aminotran_4 pf:Glyco_trans_1_4

ggo:109024635 pf:KRAB pf:SSXRD

hgl:101700728 pf:PPDFL

nmo:Nmlp_1542 pf:dUTPase

nte:NEUTE1DRAFT76993 pf:EF-hand_9

pat:Patl_0088 pf:DHquinase_II pf:BrxB

pfg:AB870_15690 pf:Yop-YscD_ppl pf:T2SSB

pmg:P9301_07231 pf:Lipase_GDSL pf:Lipase_GDSL_2

ruk:A4V00_13540 pf:tRNA-synt_1 pf:tRNA-synt_1g pf:tRNA-synt_1e pf:zinc_ribbon_15 pf:zf-C2HC5 pf:tRNA-synt_1_2 pf:tRNA-synt_1 pf:Zn-ribbon_8 pf:tRNA-synt_1 pf:tRNA-synt_1g pf:Anticodon_1

stax:MC45_18365 pf:T4SS-DNA_transf pf:TrwB_AAD_bind pf:TraG-D_C


xma:102234457 pf:Ion_trans pf:PKD_channel pf:Ion_trans pf:PKD_channel pf:FAM176 pf:Ion_trans pf:Ion_trans pf:Ion_trans pf:PKD_channel pf:GPHH pf:Ca_chan_IQ pf:CAC1F_C pf:CAC1F_C