Search common motifs in selected sequences


  
Motifs : pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DNA_primase_SDNA primase small subunit
 pf:DUF1999Protein of unknown function (DUF1999)
 pf:DUF3509Protein of unknown function (DUF3509)
 pf:DUF5415
 pf:DUF6643
 pf:FUSCFusaric acid resistance protein family
 pf:LigD_NDNA polymerase Ligase (LigD)
 pf:LigD_Prim-Pol
 pf:NTP_transf_5Uncharacterised nucleotidyltransferase
 pf:Oxidored_nitroNitrogenase component 1 type Oxidoreductase
 pf:RNA_ligaseRNA ligase
 pf:Read-throughRead-through domain
 pf:RecombinaseRecombinase
 pf:Ribosomal_L32pRibosomal L32p protein family
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

vma:VAB18032_06515 pf:DNA_ligase_A_M pf:DUF5415 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

mil:ML5_0458 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

mau:Micau_0484 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

saq:Sare_4352 pf:DNA_ligase_A_M pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

stp:Strop_3968 pf:DNA_ligase_A_M pf:DUF5415 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

afs:AFR_02060 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

actn:L083_0501 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

ams:AMIS_3570 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

ase:ACPL_520 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

cez:CBP52_04755 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

jte:ASJ30_12690 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mmar:MODMU_2075 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cfl:Cfla_1903 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

gob:Gobs_2120 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

bsd:BLASA_3098 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cfi:Celf_0800 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

sna:Snas_2814 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

ica:Intca_0626 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pmad:BAY61_28605 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

tbi:Tbis_2338 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

led:BBK82_36775 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

sesp:BN6_42910 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

acta:C1701_04550 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

psim:KR76_09220 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

noa:BKM31_27980 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

kphy:AOZ06_15230 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

phh:AFB00_09680 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DUF3509 pf:DNA_ligase_A_C

cai:Caci_5248 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF6643 pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

pseq:AD006_04015 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

psee:FRP1_24830 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

psea:WY02_17950 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

cga:Celgi_1690 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

pdx:Psed_4989 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

pecq:AD017_11835 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

acad:UA74_22360 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

acti:UA75_22835 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mix:AB663_003164 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

ars:ADJ73_02900 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

roa:Pd630_LPD04033 pf:DNA_ligase_A_M pf:NTP_transf_5 pf:DNA_ligase_A_C

req:REQ_26630 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

ndk:I601_2208 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mip:AXH82_00625 pf:LigD_Prim-Pol pf:DNA_primase_S pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

svi:Svir_34920 pf:LigD_N pf:Recombinase pf:DNA_ligase_A_M pf:DNA_ligase_A_C

all:CRK60828 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

ahg:AHOG_20405 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

pseh:XF36_23625 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_A_C

nca:Noca_1235 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

satk:SA2016_3491 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

aau:AAur_0283 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

arr:ARUE_c02810 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

fri:FraEuI1c_4744 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mhos:CXR34_07730 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

lmoi:VV02_22860 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

ahm:TL08_19410 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

dco:SAMEA4475696_1756 pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol

fal:FRAAL4382 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

mim:AKG07_06770 pf:LigD_Prim-Pol pf:DNA_primase_S pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

micr:BMW26_11320 pf:LigD_Prim-Pol pf:DNA_primase_S pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

stsi:A4E84_02040 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

tfl:RPIT_00740 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

kfl:Kfla_4705 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

amq:AMETH_5252 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

sgb:WQO_00280 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

cmc:CMN_02036 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

strt:A8713_02310 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

nsl:BOX37_27860 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

arn:CGK93_01640 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Oxidored_nitro pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cmh:VO01_09615 pf:LigD_Prim-Pol pf:DNA_primase_S pf:FUSC pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

rha:RHA1_ro00015 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

scz:ABE83_34900 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

strf:ASR50_04130 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

sco:SCO7345 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

slv:SLIV_02570 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

agy:ATC03_01400 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

aoi:AORI_1870 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Read-through

cphy:B5808_14620 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

ccap:AES38_10105 pf:LigD_Prim-Pol pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

nsr:NS506_05464 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

sle:sle_65450 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

spav:Spa2297_01950 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

maur:BOH66_07730 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

mph:MLP_04810 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

scw:TU94_01705 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

cum:NI26_01570 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

tez:BKM78_10350 pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

aja:AJAP_30105 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Read-through

rpy:Y013_03425 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

aer:AERYTH_15445 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:Ribosomal_L32p pf:DNA_ligase_A_C

cwo:Cwoe_4716 pf:LigD_N pf:DUF1999 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol

amyb:BKN51_01540 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C pf:Read-through

sdv:BN159_8336 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

cet:B8281_10560 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

cceu:CBR64_00560 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

salj:SMD11_5752 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

arx:ARZXY2_3628 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Oxidored_nitro pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

arz:AUT26_01215 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Oxidored_nitro pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cmi:CMM_2074 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

scx:AS200_41235 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mts:MTES_3162 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C

samb:SAM23877_0862 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

mpal:BO218_04155 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C