SSDB Best Search Result

KEGG ID :cni:Calni_0428 (258 a.a.)
Definition:type II site-specific deoxyribonuclease (EC:3.1.21.4); K01155 type II restriction enzyme
Update status:T01364 (arm,babb,babt,babu,banm,banv,bcew,bka,bmae,bmaq,bpsa,bpso,bsus,bthi,bww,cpse,cpsf,cpsu,ecle,ecln,ero,fpu,hih,hir,kpg,kpv,kpw,kpy,llj,lmok,lmom,lmv,mabo,nte,pacn,pant,psoj,saud,sauf,seni,spyo,thq,thz,tot,vct,vda,wic : calculation not yet completed)
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Search Result : 189 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
abl:A7H1H_0411 Dam-replacing family protein                        255     1058 (    -)     247    0.571    254     <-> 1
sanc:SANR_0703 putative type II restriction endonucleas            256     1029 (    -)     240    0.555    256     <-> 1
rsi:Runsl_4415 type II site-specific deoxyribonuclease  K01155     259     1020 (    -)     238    0.582    256     <-> 1
era:ERE_23620 Dam-replacing family. (EC:3.1.21.4)                  255     1019 (    -)     238    0.531    256     <-> 1
mcat:MC25239_00529 Dam-replacing family protein                    259      998 (    -)     233    0.562    256     <-> 1
mct:MCR_0519 putative type II restriction endonuclease  K01155     259      998 (    -)     233    0.562    256     <-> 1
ftn:FTN_1698 Dam-replacing family protein                          256      993 (    -)     232    0.539    254     <-> 1
prw:PsycPRwf_0124 type II site-specific deoxyribonuclea K01155     254      980 (    -)     229    0.531    256     <-> 1
sdl:Sdel_1531 type II site-specific deoxyribonuclease ( K01155     255      958 (    -)     224    0.502    255     <-> 1
pso:PSYCG_00970 type II restriction endonuclease DpnI              254      955 (    -)     224    0.533    257     <-> 1
par:Psyc_0143 type II restriction endonuclease DpnI (EC K01155     254      937 (    -)     219    0.521    257     <-> 1
tpk:JO40_12955 restriction endonuclease DpnI                       255      937 (    -)     219    0.531    254     <-> 1
tde:TDE1268 type II restriction endonuclease TdeI                  256      933 (    -)     219    0.523    258     <-> 1
snu:SPNA45_00401 type II restriction enzyme DpnI (dpnC)            254      931 (    -)     218    0.520    256     <-> 1
sjj:SPJ_1755 type II restriction enzyme (EC:3.1.21.4)   K01155     254      930 (    -)     218    0.520    256     <-> 1
snc:HMPREF0837_12073 type II restriction endonuclease D K01155     254      930 (    -)     218    0.520    256     <-> 1
snd:MYY_1745 type II restriction endonuclease DpnI                 254      930 (    -)     218    0.520    256     <-> 1
snt:SPT_1767 type II restriction enzyme (EC:3.1.21.4)   K01155     254      930 (    -)     218    0.520    256     <-> 1
snv:SPNINV200_16700 Methylase                                      254      930 (    -)     218    0.520    256     <-> 1
spd:SPD_1631 Dam-replacing family protein               K01155     254      930 (    -)     218    0.520    256     <-> 1
spn:SP_1850 type II restriction endonuclease DpnI       K01155     254      930 (    -)     218    0.520    256     <-> 1
spnn:T308_08385 type II restriction endonuclease DpnI              254      930 (    -)     218    0.520    256     <-> 1
spr:spr1665 type II restriction enzyme DpnI (dpnC) (EC: K01155     254      930 (    -)     218    0.520    256     <-> 1
spw:SPCG_1824 type II restriction endonuclease DpnI     K01155     254      930 (    -)     218    0.520    256     <-> 1
snx:SPNOXC_16230 Methylase                                         254      925 (    -)     217    0.516    256     <-> 1
spne:SPN034156_06960 Methylase                                     254      925 (    -)     217    0.516    256     <-> 1
spnm:SPN994038_16150 Methylase                                     254      925 (    -)     217    0.516    256     <-> 1
spno:SPN994039_16160 Methylase                                     254      925 (    -)     217    0.516    256     <-> 1
dly:Dehly_0468 type II site-specific deoxyribonuclease  K01155     256      921 (    -)     216    0.498    255     <-> 1
amu:Amuc_1564 type II site-specific deoxyribonuclease ( K01155     256      867 (    -)     203    0.481    258     <-> 1
nma:NMA0560 type II restriction endonuclease                       263      826 (    -)     194    0.441    256     <-> 1
nmz:NMBNZ0533_0434 type II restriction enzyme (EC:3.1.2            263      824 (    -)     194    0.441    256     <-> 1
nme:NMB1896 type II restriction enzyme DpnI (EC:3.1.21. K01155     267      823 (    -)     193    0.443    255     <-> 1
nmh:NMBH4476_1837 type II restriction enzyme (EC:3.1.21            267      823 (    -)     193    0.443    255     <-> 1
nmn:NMCC_0324 type II restriction endonuclease          K01155     292      821 (    -)     193    0.440    257     <-> 1
nmw:NMAA_0260 Dam-replacing protein (DRP)                          263      820 (    -)     193    0.438    256     <-> 1
nmx:NMA510612_0616 Dam-replacing protein (DRP)                     263      820 (    -)     193    0.438    256     <-> 1
nmm:NMBM01240149_0296 type II restriction enzyme (EC:3.            263      819 (    -)     193    0.438    256     <-> 1
nmq:NMBM04240196_1831 type II restriction enzyme (EC:3.            263      819 (    -)     193    0.438    256     <-> 1
ngk:NGK_0010 dam-replacing protein                      K06223     263      817 (    -)     192    0.438    256     <-> 1
ngt:NGTW08_2176 dam-replacing protein                              263      817 (    -)     192    0.438    256     <-> 1
nmt:NMV_2082 Dam-replacing protein (DRP)                           263      816 (    -)     192    0.438    256     <-> 1
nla:NLA_18310 dam-replacing protein                                263      815 (    -)     192    0.438    256     <-> 1
mam:Mesau_03384 restriction endonuclease family protein            258      794 (    -)     187    0.446    242     <-> 1
pcr:Pcryo_0153 putative type II restriction endonucleas K01155     219      732 (    -)     173    0.515    202     <-> 1
atm:ANT_07640 putative endonuclease (EC:3.1.-.-)        K01155     256      580 (    -)     138    0.332    256     <-> 1
nmp:NMBB_2162 type II restriction enzyme DpnI (EC:3.1.2            179      511 (    -)     122    0.413    172     <-> 1
bsb:Bresu_0949 Dam-replacing family protein                         80      225 (    -)      57    0.508    61      <-> 1
smia:P344_05310 hypothetical protein                               121      202 (    -)      52    0.342    117     <-> 1
smir:SMM_0892 hypothetical protein                                 106      197 (    -)      51    0.353    102     <-> 1
apal:BN85400340 Dam-replacing protein (DRP), restrictio            202      192 (    -)      50    0.462    65      <-> 1
hlr:HALLA_05705 hypothetical protein                    K07454     333      151 (    -)      40    0.462    52      <-> 1
hwa:HQ2073A hypothetical protein                                   108      133 (    -)      36    0.444    54      <-> 1
hwc:Hqrw_2247 hypothetical protein                                 108      133 (    -)      36    0.444    54      <-> 1
acl:ACL_1080 hypothetical protein                                  197      127 (    4)      35    0.403    67      <-> 2
cyu:UCYN_02550 hypothetical protein                                128      118 (    -)      33    0.354    48      <-> 1
apo:Arcpr_0648 hypothetical protein                     K06932     425      117 (    -)      33    0.357    56      <-> 1
rae:G148_1031 hypothetical protein                      K07456     715      117 (    -)      33    0.303    142      -> 1
rag:B739_1352 hypothetical protein                      K07456     715      117 (    -)      33    0.303    142      -> 1
ran:Riean_0587 DNA mismatch repair protein MutS domain- K07456     715      117 (    -)      33    0.303    142      -> 1
rar:RIA_1666 Mismatch repair ATPase (MutS family)       K07456     670      117 (    -)      33    0.303    142      -> 1
rat:M949_1781 DNA mismatch repair protein muts domain p K07456     715      117 (    -)      33    0.303    142      -> 1
tle:Tlet_0195 DNA topoisomerase I (EC:5.99.1.2)         K03168     722      116 (    7)      32    0.372    43       -> 2
ple:B186_178 tRNA(Ile)-lysidine synthetase              K04075     416      115 (    -)      32    0.378    98       -> 1
plo:C548_165 tRNA(Ile)-lysidine synthetase              K04075     416      115 (    -)      32    0.378    98       -> 1
plr:PAQ_176 tRNA(Ile)-lysidine synthase (EC:6.3.4.19)   K04075     416      115 (    -)      32    0.378    98       -> 1
ply:C530_167 tRNA(Ile)-lysidine synthetase              K04075     416      115 (    -)      32    0.378    98       -> 1
csh:Closa_1195 hypothetical protein                                160      114 (    -)      32    0.302    116     <-> 1
cel:CELE_H06I04.2 Protein SFT-1                         K14998     323      113 (    -)      32    0.303    122     <-> 1
ecb:100062686 paraoxonase 2                             K01045     354      113 (    -)      32    0.315    165     <-> 1
ast:Asulf_01007 tRNA(Ile2) 2-agmatinylcytidine syntheta K06932     421      112 (    -)      31    0.328    67      <-> 1
dpp:DICPUDRAFT_78007 hypothetical protein                         1554      112 (   11)      31    0.302    139     <-> 2
fpa:FPR_24760 Site-specific recombinases, DNA invertase            545      112 (    -)      31    0.357    70      <-> 1
ypq:DJ40_3620 dam-replacing family protein                          70      112 (    -)      31    0.432    37      <-> 1
ypy:YPK_1213 hypothetical protein                                   70      112 (    -)      31    0.432    37      <-> 1
cal:CaO19.12820 DNA-directed RNA polymerase III         K03019     111      111 (    0)      31    0.406    32      <-> 2
cdu:CD36_24590 RNA polymerase III subunit C11, putative K03019     111      111 (    -)      31    0.406    32      <-> 1
lbn:LBUCD034_2026 hypothetical protein                             525      111 (    -)      31    0.326    43      <-> 1
nzs:SLY_0519 ATP-dependent DNA helicase pcrA            K03657     713      111 (    -)      31    0.325    80       -> 1
pal:PAa_0693 ATP-dependent DNA helicase                 K03657     713      111 (    -)      31    0.325    80       -> 1
llt:CVCAS_1001 hypothetical protein                                120      110 (    0)      31    0.432    37      <-> 2
uue:UUR10_0697 ribosome biogenesis GTP-binding protein  K14540     274      110 (    -)      31    0.328    61       -> 1
cyh:Cyan8802_3807 type 11 methyltransferase                        262      109 (    -)      31    0.340    50       -> 1
iho:Igni_1124 transcription factor TFIIE subunit alpha  K03136     173      109 (    -)      31    0.333    75      <-> 1
msk:Msui00030 putative chromosomal replication initiato K02313     345      109 (    -)      31    0.338    65       -> 1
mss:MSU_0001 dnaA chromosomal replication initiation pr K02313     345      109 (    -)      31    0.338    65       -> 1
cgr:CAGL0K10384g hypothetical protein                   K00921    2104      108 (    -)      30    0.327    52      <-> 1
csv:101216368 PGR5-like protein 1A, chloroplastic-like             291      108 (    0)      30    0.321    78      <-> 4
pic:PICST_47067 RNA polymerase III C11 subunit (EC:2.7. K03019     111      108 (    -)      30    0.406    32      <-> 1
pif:PITG_16526 DNA-directed RNA polymerases III 12.5 kD K03019     105      108 (    -)      30    0.361    72      <-> 1
cmo:103497151 PGR5-like protein 1A, chloroplastic                  291      107 (    -)      30    0.321    78      <-> 1
gym:GYMC10_0443 anti-SigV factor                                   293      107 (    -)      30    0.324    74      <-> 1
hbo:Hbor_34870 hypothetical protein                                 68      107 (    -)      30    0.302    63      <-> 1
meb:Abm4_0577 peptidase M48 family                                 369      107 (    -)      30    0.343    70      <-> 1
ehe:EHEL_080080 EF-Hand Ca2+-binding protein            K06268     200      106 (    -)      30    0.314    70      <-> 1
gmx:100810405 general transcription factor IIE subunit  K03136     471      106 (    -)      30    0.338    65      <-> 1
spo:SPBC2D10.17 cryptic loci regulator Clr1                       1238      106 (    2)      30    0.308    120     <-> 2
abaz:P795_11875 large exoprotein                        K15125    1329      105 (    -)      30    0.300    100     <-> 1
bmy:Bm1_45970 tryptophanyl-tRNA synthetase family prote K13346     694      105 (    -)      30    0.329    70       -> 1
cam:101507007 general transcription factor IIE subunit  K03136     474      105 (    -)      30    0.323    65      <-> 1
cput:CONPUDRAFT_114388 DNA-directed RNA polymerase I kD K03000     125      105 (    -)      30    0.358    53      <-> 1
mok:Metok_0291 MCM family protein                       K10726     737      105 (    -)      30    0.325    80       -> 1
pmo:Pmob_1644 DNA topoisomerase I (EC:5.99.1.2)         K03168     762      105 (    -)      30    0.310    71       -> 1
tet:TTHERM_00998950 PH domain containing protein                  2090      105 (    -)      30    0.329    73       -> 1
apm:HIMB5_00008250 type 4 prepilin peptidase 1 (EC:3.4. K02654     251      104 (    -)      30    0.357    42       -> 1
dha:DEHA2A14718g DEHA2A14718p                                      495      104 (    -)      30    0.379    58      <-> 1
dsh:Dshi_1380 FAD linked oxidase domain-containing prot            468      104 (    -)      30    0.328    61       -> 1
dsi:Dsim_GD18505 GD18505 gene product from transcript G K03000     120      104 (    -)      30    0.323    62      <-> 1
eus:EUTSA_v10028349mg hypothetical protein                         444      104 (    -)      30    0.327    52      <-> 1
hpyo:HPOK113_0872 hypothetical protein                             542      104 (    -)      30    0.321    56      <-> 1
mtt:Ftrac_2411 integrase family protein                 K03733     293      104 (    -)      30    0.329    73       -> 1
pcb:PC000109.05.0 hypothetical protein                  K11547     500      104 (    1)      30    0.314    121      -> 2
prm:EW15_2163 Serine acetyltransferase (EC:2.3.1.30)    K00640     251      104 (    -)      30    0.417    60       -> 1
sot:102579587 general transcription factor IIE subunit  K03136     474      104 (    -)      30    0.324    74      <-> 1
aba:Acid345_0112 FAD dependent oxidoreductase                      487      103 (    -)      29    0.316    79      <-> 1
acan:ACA1_394970 hypothetical protein                              408      103 (    -)      29    0.311    45      <-> 1
bfu:BC1G_05842 hypothetical protein                               1024      103 (    -)      29    0.312    77      <-> 1
enr:H650_23745 diguanylate cyclase                      K13069     460      103 (    -)      29    0.325    77       -> 1
tuz:TUZN_0325 pyruvate formate-lyase activating enzyme  K04069     361      103 (    -)      29    0.341    44       -> 1
vpa:VP0614 hypothetical protein                                     74      103 (    2)      29    0.385    39      <-> 2
vpb:VPBB_0585 hypothetical protein                                  74      103 (    2)      29    0.385    39      <-> 2
vpf:M634_04960 NAD-dependent DNA ligase C4 zinc finger              74      103 (    2)      29    0.385    39      <-> 2
vph:VPUCM_0598 Hypothetical protein yfgJ                            74      103 (    2)      29    0.385    39      <-> 2
vpk:M636_18755 NAD-dependent DNA ligase C4 zinc finger              74      103 (    2)      29    0.385    39      <-> 2
aly:ARALYDRAFT_672774 hypothetical protein                         605      102 (    1)      29    0.301    83      <-> 2
aml:100478668 zinc finger, FYVE domain containing 20    K12481     783      102 (    -)      29    0.308    91      <-> 1
bmor:101744923 uncharacterized LOC101744923                        643      102 (    2)      29    0.306    85      <-> 2
buh:BUAMB_344 valyl-tRNA synthetase                     K01873     950      102 (    -)      29    0.375    56       -> 1
cmr:Cycma_0764 carbohydrate-binding CenC domain-contain           1526      102 (    -)      29    0.337    86       -> 1
crb:CARUB_v10007680mg hypothetical protein                         376      102 (    -)      29    0.327    52      <-> 1
fjo:Fjoh_4878 cytochrome d ubiquinol oxidase subunit II K00426     358      102 (    -)      29    0.312    96      <-> 1
gpa:GPA_33500 hypothetical protein                                  62      102 (    -)      29    0.309    55      <-> 1
hcn:HPB14_02365 hypothetical protein                               555      102 (    -)      29    0.339    56       -> 1
hhl:Halha_1289 Protein of unknown function (DUF1407)                87      102 (    -)      29    0.388    49      <-> 1
mpz:Marpi_1904 hypothetical protein                               1185      102 (    -)      29    0.323    99       -> 1
pfh:PFHG_03941 conserved hypothetical protein                      566      102 (    -)      29    0.302    106     <-> 1
pit:PIN17_0200 hypothetical protein                               1134      102 (    -)      29    0.349    83      <-> 1
scq:SCULI_v1c02170 aldo/keto reductase                             268      102 (    -)      29    0.316    95      <-> 1
sma:SAV_3533 phosphopyruvate hydratase (EC:4.2.1.11)    K01689     428      102 (    -)      29    0.381    63       -> 1
afm:AFUA_5G09320 signal transduction protein Syg1                  996      101 (    -)      29    0.328    61      <-> 1
amed:B224_1803 hypothetical protein                                316      101 (    0)      29    0.357    42      <-> 4
ath:AT5G40250 RING-H2 finger protein ATL46                         376      101 (    -)      29    0.327    52      <-> 1
bacu:103020089 zinc finger, FYVE domain containing 20   K12481     784      101 (    -)      29    0.308    91       -> 1
bxb:DR64_1450 ubiE/COQ5 methyltransferase family protei            346      101 (    -)      29    0.448    29       -> 1
cfa:484642 zinc finger, FYVE domain containing 20       K12481     782      101 (    -)      29    0.308    91      <-> 1
ctp:CTRG_02041 DNA-directed RNA polymerases III 12.5 kD K03019     111      101 (    -)      29    0.375    32      <-> 1
ddh:Desde_3952 alkylphosphonate utilization operon prot K06193     113      101 (    -)      29    0.340    53      <-> 1
ehi:EHI_138750 tyrosine kinase                                    1088      101 (    -)      29    0.312    64       -> 1
fca:101099700 zinc finger, FYVE domain containing 20    K12481     783      101 (    -)      29    0.308    91      <-> 1
hem:K748_01615 plasmid stabilization protein                       551      101 (    -)      29    0.321    56      <-> 1
heq:HPF32_0829 hypothetical protein                                548      101 (    -)      29    0.321    56      <-> 1
hpd:KHP_0469 hypothetical protein                                  536      101 (    -)      29    0.321    56      <-> 1
hph:HPLT_04370 plasminogen-binding protein PgbB                    534      101 (    -)      29    0.321    56      <-> 1
hpn:HPIN_02300 hypothetical protein                                543      101 (    -)      29    0.321    56      <-> 1
hpym:K749_03180 plasmid stabilization protein                      551      101 (    -)      29    0.321    56      <-> 1
hpyr:K747_11120 plasmid stabilization protein                      551      101 (    -)      29    0.321    56      <-> 1
ngi:103731903 ras-related protein Rab-12-like           K07907     242      101 (    -)      29    0.348    66      <-> 1
nkr:NKOR_04565 hypothetical protein                                318      101 (    -)      29    0.300    70       -> 1
pda:103697620 general transcription factor IIE subunit  K03136     435      101 (    -)      29    0.400    50       -> 1
ptg:102966310 zinc finger, FYVE domain containing 20    K12481     783      101 (    -)      29    0.308    91       -> 1
scs:Sta7437_3189 protein of unknown function DUF29                 144      101 (    -)      29    0.333    75      <-> 1
tva:TVAG_281080 Adenylate and Guanylate cyclase catalyt           1549      101 (    -)      29    0.324    71       -> 1
umr:103669526 zinc finger, FYVE domain containing 20    K12481     783      101 (    -)      29    0.308    91      <-> 1
vce:Vch1786_I0271 hypothetical protein                              77      101 (    -)      29    0.312    48      <-> 1
vch:VC0765 hypothetical protein                                     77      101 (    -)      29    0.312    48      <-> 1
vci:O3Y_03560 hypothetical protein                                  77      101 (    -)      29    0.312    48      <-> 1
vcj:VCD_003561 hypothetical protein                                 77      101 (    -)      29    0.312    48      <-> 1
vcm:VCM66_0723 hypothetical protein                                 77      101 (    -)      29    0.312    48      <-> 1
vcq:EN18_07210 DNA ligase                                           77      101 (    -)      29    0.312    48      <-> 1
vcy:IX92_02785 DNA ligase                                           72      101 (    -)      29    0.367    49      <-> 1
vfu:vfu_A02769 hypothetical protein                                 74      101 (    -)      29    0.385    39      <-> 1
bcq:BCQ_4305 hypothetical protein                                  396      100 (    -)      29    0.346    78      <-> 1
bom:102278443 zinc finger, FYVE domain containing 20    K12481     783      100 (    -)      29    0.308    91      <-> 1
brp:103863965 RING-H2 finger protein ATL46                         361      100 (    -)      29    0.345    55      <-> 1
bta:511484 zinc finger, FYVE domain containing 20       K12481     783      100 (    -)      29    0.308    91      <-> 1
cfr:102519629 zinc finger, FYVE domain containing 20    K12481     785      100 (    -)      29    0.300    90      <-> 1
cjc:100404343 zinc finger, FYVE domain containing 20    K12481     815      100 (    -)      29    0.308    91       -> 1
coc:Coch_0033 Hyalin                                              3958      100 (    -)      29    0.323    96      <-> 1
dwi:Dwil_GK13021 GK13021 gene product from transcript G K03000     121      100 (    -)      29    0.306    62      <-> 1
fnu:FN0923 cardiolipin synthetase (EC:2.7.8.-)          K06131     479      100 (    -)      29    0.308    91       -> 1
hpj:jhp0797 hypothetical protein                                   541      100 (    -)      29    0.321    56      <-> 1
mox:DAMO_2322 transcriptional regulator                 K03655     552      100 (    -)      29    0.357    70       -> 1
mpu:MYPU_0990 sugar ABC transporter ATP-binding protein K10112     586      100 (    -)      29    0.333    63       -> 1
mus:103990642 general transcription factor IIE subunit  K03136     469      100 (    -)      29    0.343    70      <-> 1
pbi:103060891 Ras protein-specific guanine nucleotide-r K04349    1255      100 (    -)      29    0.337    89      <-> 1
ptm:GSPATT00030071001 hypothetical protein                         881      100 (    0)      29    0.333    57      <-> 2
scl:sce5169 hypothetical protein                                   359      100 (    -)      29    0.388    49       -> 1
tru:101065932 ras-related protein Rab-12-like           K07907     242      100 (    -)      29    0.343    67      <-> 1
vfi:VF_0635 hypothetical protein                                    77      100 (    -)      29    0.395    43      <-> 1

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