SSDB Best Search Result

KEGG ID :cph:Cpha266_2523 (254 a.a.)
Definition:type II site-specific deoxyribonuclease (EC:3.1.21.4); K01155 type II restriction enzyme
Update status:T00439 (babb,babt,blz,brp,bsul,bsus,bsut,bthr,bww,ecle,ero,fpu,hia,hir,kpb,kpg,kpv,kpw,kpy,llx,mde,mgj,mus,nmx,nte,pacn,pant,ppud,psoj,pxb,sagt,spyo,tot,trm,vcy,vda,vtu,wic : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:
  

Search Result : 134 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
cli:Clim_0645 type II site-specific deoxyribonuclease (            254     1587 (    -)     368    0.929    254     <-> 1
cpb:Cphamn1_1063 type II site-specific deoxyribonucleas            257     1326 (    -)     308    0.750    252     <-> 1
geo:Geob_0584 type II site-specific deoxyribonuclease (            249      763 (    -)     180    0.568    206     <-> 1
cyn:Cyan7425_4267 type II site-specific deoxyribonuclea            169      260 (    -)      65    0.365    167     <-> 1
dba:Dbac_0892 hypothetical protein                                 233      233 (    -)      59    0.265    215     <-> 1
ang:ANI_1_1952024 hypothetical protein                             494      120 (    -)      33    0.358    67      <-> 1
sia:M1425_0812 mandelate racemase/muconate lactonizing             370      118 (    -)      33    0.328    116     <-> 1
sid:M164_0842 mandelate racemase/muconate lactonizing p            370      118 (    -)      33    0.328    116     <-> 1
sim:M1627_0816 mandelate racemase/muconate lactonizing             370      118 (    -)      33    0.328    116     <-> 1
cfa:611850 zinc finger protein 75D                      K09229     522      117 (    -)      33    0.324    111     <-> 1
sii:LD85_1033 Mandelate racemase/muconate lactonizing d            370      114 (    -)      32    0.319    116     <-> 1
sis:LS215_0795 mandelate racemase/muconate lactonizing             370      114 (    -)      32    0.319    116     <-> 1
siy:YG5714_0823 mandelate racemase/muconate lactonizing            370      114 (    -)      32    0.319    116     <-> 1
sin:YN1551_2030 mandelate racemase/muconate lactonizing            370      112 (    -)      31    0.319    116      -> 1
hmg:101236946 uncharacterized LOC101236946                         781      110 (    -)      31    0.303    66       -> 1
mec:Q7C_597 DNA polymerase III subunit delta (EC:2.7.7. K02340     343      109 (    -)      31    0.301    103     <-> 1
syf:Synpcc7942_1008 formyltetrahydrofolate deformylase  K01433     284      109 (    -)      31    0.304    79       -> 1
mer:H729_00325 hypothetical protein                                281      108 (    -)      30    0.312    154     <-> 1
pgm:PGRAT_27535 hypothetical protein                               378      108 (    -)      30    0.393    61      <-> 1
pmum:103320607 uncharacterized LOC103320607                       1294      108 (    -)      30    0.310    84      <-> 1
syc:syc0537_d formyltetrahydrofolate deformylase (EC:3. K01433     284      108 (    -)      30    0.308    78       -> 1
vvi:100241894 dnaJ homolog subfamily C member 28-like              203      108 (    8)      30    0.346    130     <-> 2
dfe:Dfer_1551 hypothetical protein                                 329      107 (    -)      30    0.385    39      <-> 1
ent:Ent638_2355 trehalase (EC:3.2.1.28)                 K01194     568      107 (    -)      30    0.327    104     <-> 1
ere:EUBREC_3564 adenine-specific DNA methylase                    2560      107 (    -)      30    0.318    85       -> 1
tjr:TherJR_1309 cobyrinic acid a,c-diamide synthase     K02224     464      107 (    -)      30    0.345    87       -> 1
cal:CaO19.707 similar to S. cerevisiae ATG7 (YHR171W) p K08337     639      106 (    0)      30    0.311    103     <-> 2
mcz:BN45_70161 Conserved protein of unknown function, M K02067     357      106 (    -)      30    0.330    103     <-> 1
ppuu:PputUW4_01259 urea carboxylase-related aminomethyl K09967     241      106 (    -)      30    0.346    78      <-> 1
dgr:Dgri_GH10613 GH10613 gene product from transcript G            175      105 (    -)      30    0.309    55      <-> 1
fme:FOMMEDRAFT_168081 TPR-like protein                            1221      105 (    4)      30    0.312    112      -> 2
afi:Acife_1651 response regulator                                  128      104 (    -)      30    0.421    57      <-> 1
atr:s00105p00157180 hypothetical protein                           294      104 (    -)      30    0.351    77      <-> 1
cmp:Cha6605_2697 N-methylhydantoinase B/acetone carboxy K01469    1268      104 (    -)      30    0.324    71      <-> 1
dal:Dalk_0088 radical SAM domain-containing protein                494      104 (    -)      30    0.346    52       -> 1
mir:OCQ_05840 hypothetical protein                      K02067     354      104 (    -)      30    0.310    155     <-> 1
sbi:SORBI_06g017040 hypothetical protein                K15865     623      104 (    -)      30    0.305    141      -> 1
shg:Sph21_0203 multi-sensor hybrid histidine kinase               1203      104 (    -)      30    0.319    72       -> 1
cdu:CD36_32270 autophagy-related protein, putative      K08337     639      103 (    -)      29    0.301    103     <-> 1
csn:Cyast_1824 hypothetical protein                               1299      103 (    -)      29    0.317    104     <-> 1
cyp:PCC8801_3885 RTX cytolytic toxin protein A                    1394      103 (    -)      29    0.352    54       -> 1
dosa:Os12t0585300-01 Cyclin-like F-box domain containin            418      103 (    -)      29    0.324    71      <-> 1
maf:MAF_35100 MCE-family protein MCE4C                  K02067     357      103 (    -)      29    0.330    103     <-> 1
mbb:BCG_3561c Mce-family protein mce4C                  K02067     357      103 (    -)      29    0.330    103     <-> 1
mbk:K60_036320 MCE-family protein                       K02067     357      103 (    -)      29    0.330    103     <-> 1
mbm:BCGMEX_3559c MCE-family protein                     K02067     357      103 (    -)      29    0.330    103     <-> 1
mbo:Mb3527c MCE-family protein MCE4C                    K02067     357      103 (    -)      29    0.330    103     <-> 1
mbt:JTY_3561 MCE-family protein                         K02067     357      103 (    -)      29    0.330    103     <-> 1
mbz:LH58_18945 mammalian cell entry protein             K02067     357      103 (    -)      29    0.330    103     <-> 1
mce:MCAN_35111 MCE-family protein MCE4C                 K02067     357      103 (    -)      29    0.330    103     <-> 1
mcq:BN44_80173 Conserved protein of unknown function, M K02067     357      103 (    -)      29    0.330    103     <-> 1
mcv:BN43_70165 Conserved protein of unknown function, M K02067     357      103 (    -)      29    0.330    103     <-> 1
mra:MRA_3537 MCE-family protein Mce4C                   K02067     357      103 (    -)      29    0.330    103     <-> 1
mtb:TBMG_03542 MCE-family protein mce4C                 K02067     357      103 (    -)      29    0.330    103     <-> 1
mtc:MT3601 virulence factor mce family protein          K02067     357      103 (    -)      29    0.330    103     <-> 1
mtd:UDA_3497c hypothetical protein                      K02067     357      103 (    -)      29    0.330    103     <-> 1
mte:CCDC5079_3234 MCE-family protein mce4C              K02067     357      103 (    -)      29    0.330    103     <-> 1
mtf:TBFG_13531 MCE-family protein mce4C                 K02067     357      103 (    -)      29    0.330    103     <-> 1
mtg:MRGA327_21535 MCE-family protein MCE4C              K02067     357      103 (    -)      29    0.330    103     <-> 1
mti:MRGA423_22020 MCE-family protein MCE4C              K02067     357      103 (    -)      29    0.330    103     <-> 1
mtj:J112_18800 MCE-family protein mce4C                 K02067     357      103 (    -)      29    0.330    103     <-> 1
mtk:TBSG_03564 MCE-family protein mce4C                 K02067     357      103 (    -)      29    0.330    103     <-> 1
mtl:CCDC5180_3188 MCE-family protein mce4C              K02067     357      103 (    -)      29    0.330    103     <-> 1
mtn:ERDMAN_3838 MCE-family protein                      K02067     357      103 (    -)      29    0.330    103     <-> 1
mto:MTCTRI2_3563 MCE-family protein MCE4C               K02067     357      103 (    -)      29    0.330    103     <-> 1
mtq:HKBS1_3710 MCE-family protein Mce4C                 K02067     357      103 (    -)      29    0.330    103     <-> 1
mtu:Rv3497c Mce family protein Mce4C                    K02067     357      103 (    -)      29    0.330    103     <-> 1
mtub:MT7199_3558 MCE-FAMILY protein MCE4C               K02067     357      103 (    -)      29    0.330    103     <-> 1
mtuc:J113_24410 MCE-family protein                      K02067     357      103 (    -)      29    0.330    103     <-> 1
mtue:J114_18700 MCE-family protein                      K02067     357      103 (    -)      29    0.330    103     <-> 1
mtuh:I917_24530 hypothetical protein                    K02067     357      103 (    -)      29    0.330    103     <-> 1
mtul:TBHG_03441 MCE-family protein Mce4C                K02067     357      103 (    -)      29    0.330    103     <-> 1
mtur:CFBS_3713 MCE-family protein Mce4C                 K02067     357      103 (    -)      29    0.330    103     <-> 1
mtut:HKBT1_3699 MCE-family protein Mce4C                K02067     357      103 (    -)      29    0.330    103     <-> 1
mtuu:HKBT2_3707 MCE-family protein Mce4C                K02067     357      103 (    -)      29    0.330    103     <-> 1
mtv:RVBD_3497c MCE-family protein Mce4C                 K02067     357      103 (    -)      29    0.330    103     <-> 1
mtx:M943_17985 mammalian cell entry protein             K02067     357      103 (    -)      29    0.330    103     <-> 1
mtz:TBXG_003513 MCE-family protein mce4C                K02067     357      103 (    -)      29    0.330    103     <-> 1
nla:NLA_17090 hexosaminidase (EC:3.2.1.52)              K01207     361      103 (    -)      29    0.330    88       -> 1
osa:9269040 Os12g0585200                                           418      103 (    -)      29    0.324    71      <-> 1
rsl:RPSI07_3136 isocitrate dehydrogenase kinase/phospha K00906     608      103 (    -)      29    0.369    65      <-> 1
sita:101768459 threonylcarbamoyladenosine tRNA methylth K15865     624      103 (    -)      29    0.305    141      -> 1
sta:STHERM_c15750 group 1 glycosyl transferase                     451      103 (    -)      29    0.338    80       -> 1
edi:EDI_228250 cyclin-dependent kinase C-1 (EC:2.7.11.2            335      102 (    -)      29    0.312    80      <-> 1
pfo:Pfl01_1340 hypothetical protein                     K09967     241      102 (    -)      29    0.333    78      <-> 1
hxa:Halxa_0461 WD40-like beta Propeller containing prot K01730     402      101 (    -)      29    0.308    104     <-> 1
nal:B005_1000 uvrD/REP helicase N-terminal domain prote           1038      101 (    -)      29    0.306    98       -> 1
sbg:SBG_1655 periplasmic trehalase                      K01194     569      101 (    -)      29    0.330    103     <-> 1
sbz:A464_1896 Trehalase                                 K01194     569      101 (    -)      29    0.330    103     <-> 1
bacu:103004262 NK2 homeobox 6                           K09346     287      100 (    -)      29    0.352    71      <-> 1
cfr:102517501 developmental pluripotency associated 3              135      100 (    -)      29    0.320    50      <-> 1
cmo:103503607 probably inactive leucine-rich repeat rec            950      100 (    -)      29    0.319    113     <-> 1
gya:GYMC52_3624 5-oxoprolinase (ATP-hydrolyzing) (EC:3. K01474     597      100 (    -)      29    0.338    68      <-> 1
gyc:GYMC61_3602 5-oxoprolinase (ATP-hydrolyzing) (EC:3. K01474     597      100 (    -)      29    0.338    68      <-> 1
hwa:HQ1780A gas-vesicle operon protein gvpN                        358      100 (    -)      29    0.317    101      -> 1
nmi:NMO_0412 beta-hexosaminidase (EC:3.2.1.52)          K01207     361      100 (    -)      29    0.330    88       -> 1
nmw:NMAA_0373 beta-hexosaminidase(N-acetyl-beta-glucosa K01207     361      100 (    -)      29    0.330    88       -> 1
pmj:P9211_15311 hypothetical protein                               503      100 (    -)      29    0.319    72      <-> 1
rto:RTO_11420 hypothetical protein                                 756      100 (    -)      29    0.306    85       -> 1
sbv:N643_08025 trehalase (EC:3.2.1.28)                  K01194     569      100 (    -)      29    0.320    100     <-> 1
sea:SeAg_B1337 trehalase (EC:3.2.1.28)                  K01194     570      100 (    -)      29    0.320    100     <-> 1
seb:STM474_1817 trehalase                               K01194     570      100 (    -)      29    0.320    100     <-> 1
sec:SC1789 trehalase (EC:3.2.1.28)                      K01194     570      100 (    -)      29    0.320    100     <-> 1
sed:SeD_A1522 trehalase (EC:3.2.1.28)                   K01194     570      100 (    -)      29    0.320    100     <-> 1
seeb:SEEB0189_10510 trehalase (EC:3.2.1.28)             K01194     570      100 (    -)      29    0.320    100     <-> 1
seec:CFSAN002050_15455 trehalase (EC:3.2.1.28)          K01194     570      100 (    -)      29    0.320    100     <-> 1
seeh:SEEH1578_18240 trehalase (EC:3.2.1.28)             K01194     570      100 (    -)      29    0.320    100     <-> 1
seen:SE451236_14920 trehalase (EC:3.2.1.28)             K01194     570      100 (    -)      29    0.320    100     <-> 1
seep:I137_07285 trehalase (EC:3.2.1.28)                 K01194     570      100 (    -)      29    0.320    100     <-> 1
sef:UMN798_1890 Periplasmic trehalase precursor         K01194     570      100 (    -)      29    0.320    100     <-> 1
seg:SG1320 trehalase (EC:3.2.1.28)                      K01194     570      100 (    -)      29    0.320    100     <-> 1
sega:SPUCDC_1612 Periplasmic trehalase                  K01194     570      100 (    -)      29    0.320    100     <-> 1
seh:SeHA_C1994 trehalase (EC:3.2.1.28)                  K01194     569      100 (    -)      29    0.320    100     <-> 1
sej:STMUK_1768 trehalase                                K01194     570      100 (    -)      29    0.320    100     <-> 1
sek:SSPA1005 trehalase                                  K01194     570      100 (    -)      29    0.320    100     <-> 1
sel:SPUL_1612 Periplasmic trehalase                     K01194     570      100 (    -)      29    0.320    100     <-> 1
sem:STMDT12_C18170 trehalase (EC:3.2.1.28)              K01194     570      100 (    -)      29    0.320    100     <-> 1
senb:BN855_18530 trehalase, periplasmic                 K01194     570      100 (    -)      29    0.320    100     <-> 1
sene:IA1_08915 trehalase (EC:3.2.1.28)                  K01194     570      100 (    -)      29    0.320    100     <-> 1
senh:CFSAN002069_22855 trehalase (EC:3.2.1.28)          K01194     570      100 (    -)      29    0.320    100     <-> 1
senr:STMDT2_17161 Periplasmic trehalase precursor (EC:3 K01194     570      100 (    -)      29    0.320    100     <-> 1
sens:Q786_06205 trehalase (EC:3.2.1.28)                 K01194     570      100 (    -)      29    0.320    100     <-> 1
seo:STM14_2172 trehalase                                K01194     570      100 (    -)      29    0.320    100     <-> 1
set:SEN1241 trehalase (EC:3.2.1.28)                     K01194     570      100 (    -)      29    0.320    100     <-> 1
setc:CFSAN001921_08105 trehalase (EC:3.2.1.28)          K01194     570      100 (    -)      29    0.320    100     <-> 1
setu:STU288_05345 trehalase (EC:3.2.1.28)               K01194     570      100 (    -)      29    0.320    100     <-> 1
sev:STMMW_17881 Alpha,alpha-trehalase                   K01194     570      100 (    -)      29    0.320    100     <-> 1
sey:SL1344_1724 Periplasmic trehalase (EC:3.2.1.28)     K01194     570      100 (    -)      29    0.320    100     <-> 1
shb:SU5_02400 Trehalase (EC:3.2.1.28)                   K01194     570      100 (    -)      29    0.320    100     <-> 1
sno:Snov_1851 proton-translocating NADH-quinone oxidore K00342     504      100 (    -)      29    0.373    83       -> 1
spq:SPAB_01423 trehalase                                K01194     570      100 (    -)      29    0.320    100     <-> 1
spt:SPA1077 trehalase, periplasmic                      K01194     570      100 (    -)      29    0.320    100     <-> 1
stm:STM1796 trehalase (EC:3.2.1.28)                     K01194     570      100 (    -)      29    0.320    100     <-> 1
ter:Tery_1835 peptidyl-Asp metallopeptidase (EC:3.4.24.           2062      100 (    -)      29    0.301    73       -> 1

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]