SSDB Best Search Result

KEGG ID :cpo:COPRO5265_1446 (310 a.a.)
Definition:type II restriction enzyme R protein; K01155 type II restriction enzyme
Update status:T00773 (aeu,bka,bpso,bsup,bsuv,cmx,hyd,mabo,sox,thq,thz,vct : calculation not yet completed)
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Search Result : 187 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
cth:Cthe_1512 Type II site-specific deoxyribonuclease ( K01155     310     1479 (    -)     343    0.694    310     <-> 1
ctx:Clo1313_2274 type II site-specific deoxyribonucleas K01155     310     1471 (    -)     341    0.690    310     <-> 1
gst:HW35_01470 Type II restriction endonuclease BstXII  K01155     310     1064 (    -)     248    0.511    305     <-> 1
tli:Tlie_0307 type II site-specific deoxyribonuclease   K01155     300      920 (    -)     216    0.478    291     <-> 1
mja:MJ_0600 type II R/M system restriction enzyme 2     K01155     290      883 (    -)     207    0.483    292     <-> 1
mok:Metok_0256 type II site-specific deoxyribonuclease  K01155     290      859 (    -)     202    0.479    292     <-> 1
dte:Dester_0101 type II site-specific deoxyribonuclease K01155     300      833 (    -)     196    0.435    294     <-> 1
ssa:SSA_1716 restriction endonuclease SsuRB (EC:3.1.21. K01155     308      805 (    -)     189    0.421    309     <-> 1
ant:Arnit_2984 type II site-specific deoxyribonuclease  K01155     292      794 (    -)     187    0.459    294     <-> 1
ssk:SSUD12_0039 restriction endonuclease                K01155     301      794 (  232)     187    0.436    291     <-> 2
ssq:SSUD9_0037 type II site-specific deoxyribonuclease  K01155     301      786 (  226)     185    0.430    291     <-> 2
sst:SSUST3_0038 type II site-specific deoxyribonuclease K01155     301      786 (  226)     185    0.430    291     <-> 2
ssuy:YB51_0185 Type II restriction enzyme MjaIII (EC:3. K01155     301      786 (  226)     185    0.430    291     <-> 2
smb:smi_0526 type II restriction enzyme DPNII homolog ( K01155     302      739 (    -)     174    0.428    276     <-> 1
apal:BN85400320 Type II site-specific deoxyribonuclease K01155     288      737 (    -)     174    0.425    299     <-> 1
acl:ACL_1082 type II site-specific deoxyribonuclease (E K01155     283      686 (    -)     162    0.405    291     <-> 1
tit:Thit_0486 type II site-specific deoxyribonuclease ( K01155     307      652 (    -)     154    0.368    304     <-> 1
snm:SP70585_1903 type II restriction enzyme (EC:3.1.21. K01155     288      650 (    -)     154    0.364    294     <-> 1
spng:HMPREF1038_01817 type II restriction enzyme DpnII  K01155     288      650 (    -)     154    0.364    294     <-> 1
spp:SPP_1848 type II restriction enzyme (EC:3.1.21.4)   K01155     288      650 (    -)     154    0.364    294     <-> 1
spx:SPG_1733 DpnII endonuclease (EC:3.1.21.4)           K01155     288      650 (    -)     154    0.364    294     <-> 1
snb:SP670_1923 type II restriction enzyme DpnII (EC:3.1 K01155     288      647 (    -)     153    0.364    294     <-> 1
snp:SPAP_1844 hypothetical protein                      K01155     288      647 (    -)     153    0.364    294     <-> 1
spv:SPH_1964 type II restriction enzyme DpnII (EC:3.1.2 K01155     288      647 (    -)     153    0.364    294     <-> 1
tbo:Thebr_1821 type II site-specific deoxyribonuclease  K01155     307      646 (    -)     153    0.365    304     <-> 1
tex:Teth514_0459 type II site-specific deoxyribonucleas K01155     307      646 (    -)     153    0.365    304     <-> 1
thx:Thet_0507 Type II site-specific deoxyribonuclease ( K01155     307      646 (    -)     153    0.365    304     <-> 1
tpd:Teth39_1776 type II site-specific deoxyribonuclease K01155     307      646 (    -)     153    0.365    304     <-> 1
trm:JO41_08570 restriction endonuclease DpnII           K01155     286      646 (  546)     153    0.362    290     <-> 2
sni:INV104_15870 Type II restriction enzyme             K01155     275      643 (    -)     152    0.369    287     <-> 1
ert:EUR_02470 DpnII restriction endonuclease. (EC:3.1.2 K01155     285      637 (    -)     151    0.363    295     <-> 1
ssg:Selsp_0626 Type II site-specific deoxyribonuclease  K01155     328      626 (    -)     149    0.342    292     <-> 1
tki:TKV_c04880 type-2 restriction enzyme MjaIII (EC:3.1 K01155     306      625 (    -)     148    0.343    303     <-> 1
ral:Rumal_0668 type II site-specific deoxyribonuclease  K01155     285      623 (    -)     148    0.354    291     <-> 1
tsu:Tresu_1694 type II site-specific deoxyribonuclease  K01155     286      620 (    -)     147    0.341    290     <-> 1
mss:MSU_0849 type II restriction enzyme DpnII (EC:3.1.2 K01155     286      616 (    -)     146    0.370    289     <-> 1
mcu:HMPREF0573_11642 type II site-specific deoxyribonuc K01155     296      613 (    -)     146    0.351    299     <-> 1
eel:EUBELI_01767 type II restriction enzyme             K01155     287      612 (    -)     145    0.347    291     <-> 1
esu:EUS_22060 DpnII restriction endonuclease. (EC:3.1.2 K01155     286      606 (    -)     144    0.346    292     <-> 1
csr:Cspa_c40500 type-2 restriction enzyme DpnII (EC:3.1 K01155     283      593 (    -)     141    0.341    287     <-> 1
bsa:Bacsa_2065 type II site-specific deoxyribonuclease  K01155     292      585 (    -)     139    0.325    292     <-> 1
fnc:HMPREF0946_02035 hypothetical protein               K01155     285      575 (    -)     137    0.336    292     <-> 1
mmo:MMOB3440 type II restriction enzyme DpnII (EC:3.1.2 K01155     297      575 (    -)     137    0.366    295     <-> 1
tme:Tmel_0307 Type II site-specific deoxyribonuclease ( K01155     272      573 (    -)     136    0.370    281     <-> 1
bvs:BARVI_06925 type II restriction endonuclease        K01155     285      566 (    -)     135    0.322    292     <-> 1
fpe:Ferpe_1710 DpnII restriction endonuclease           K01155     312      566 (    -)     135    0.336    304     <-> 1
scc:Spico_0553 type II site-specific deoxyribonuclease  K01155     285      565 (    -)     135    0.339    292     <-> 1
tat:KUM_0834 Type II restriction endonuclease           K01155     293      565 (    -)     135    0.357    294     <-> 1
meth:MBMB1_0502 type II restriction-modification system            292      559 (   19)     133    0.374    289     <-> 2
med:MELS_0976 type II site-specific deoxyribonuclease   K01155     284      557 (    -)     133    0.316    294     <-> 1
rae:G148_1739 hypothetical protein                      K01155     279      546 (    -)     130    0.356    295     <-> 1
rag:B739_0012 hypothetical protein                      K01155     279      546 (    -)     130    0.356    295     <-> 1
rai:RA0C_0017 type ii site-specific deoxyribonuclease   K01155     279      546 (    -)     130    0.356    295     <-> 1
ran:Riean_1818 type ii site-specific deoxyribonuclease  K01155     279      546 (    -)     130    0.356    295     <-> 1
rar:RIA_0344 DpmII restriction endonuclease             K01155     279      546 (    -)     130    0.356    295     <-> 1
rat:M949_0441 type ii site-specific deoxyribonuclease   K01155     279      546 (    -)     130    0.356    295     <-> 1
cha:CHAB381_1228 restriction endonuclease R.IB          K01155     273      541 (    -)     129    0.376    279     <-> 1
hes:HPSA_00475 type II restriction enzyme R protein (hs K01155     296      540 (    -)     129    0.387    287     <-> 1
hpe:HPELS_00475 type II restriction enzyme R protein (h K01155     276      540 (    -)     129    0.383    287     <-> 1
dth:DICTH_1799 type II restriction enzyme DpnII (EC:3.1 K01155     296      536 (    -)     128    0.327    294     <-> 1
hpyk:HPAKL86_01620 type II restriction enzyme R protein K01155     277      536 (    -)     128    0.379    285     <-> 1
hei:C730_00445 type II restriction enzyme R protein (hs K01155     277      535 (    -)     128    0.378    286     <-> 1
heo:C694_00445 type II restriction enzyme R protein (hs K01155     277      535 (    -)     128    0.378    286     <-> 1
her:C695_00445 type II restriction enzyme R protein (hs K01155     277      535 (    -)     128    0.378    286     <-> 1
hpy:HP0091 type II restriction enzyme R protein HsdR    K01155     277      535 (    -)     128    0.378    286     <-> 1
meb:Abm4_1017 type II restriction endonuclease          K01155     295      535 (    -)     128    0.360    297     <-> 1
hcn:HPB14_00445 type II restriction enzyme R protein (h K01155     276      532 (    -)     127    0.380    287     <-> 1
hpt:HPSAT_00425 type II restriction enzyme R protein (h K01155     277      531 (    -)     127    0.378    286     <-> 1
heu:HPPN135_00465 type II restriction enzyme R protein  K01155     277      529 (    -)     126    0.376    282     <-> 1
hpz:HPKB_0104 type II restriction enzyme R protein (hsd K01155     277      529 (    -)     126    0.380    287     <-> 1
hhr:HPSH417_00435 type II restriction enzyme R protein  K01155     277      528 (    -)     126    0.379    282     <-> 1
hpyu:K751_07180 type II restriction endonuclease MboI   K01155     277      528 (    -)     126    0.376    287     <-> 1
hhq:HPSH169_00435 type II restriction enzyme R protein  K01155     277      526 (    -)     126    0.371    286     <-> 1
hey:MWE_0183 type II restriction enzyme R protein (HsdR K01155     277      525 (    -)     126    0.373    287     <-> 1
hpf:HPF30_1170 Type II restriction enzyme protein       K01155     277      525 (    -)     126    0.375    288     <-> 1
hpyl:HPOK310_0104 Type II restriction enzyme protein    K01155     276      525 (    -)     126    0.374    286     <-> 1
mfm:MfeM64YM_0146 type ii restriction enzyme dpnii      K01155     285      525 (    -)     126    0.337    291     <-> 1
cft:CFF04554_0318 type II restriction endonuclease, Mbo K01155     262      523 (    -)     125    0.369    274     <-> 1
hem:K748_03515 type II restriction endonuclease MboI    K01155     277      523 (    -)     125    0.369    287     <-> 1
hpym:K749_05095 type II restriction endonuclease MboI   K01155     277      523 (    -)     125    0.369    287     <-> 1
chy:CHY_2211 type II restriction endonuclease           K01155     315      521 (    -)     125    0.322    307     <-> 1
mfp:MBIO_0191 hypothetical protein                      K01155     292      518 (    -)     124    0.331    302     <-> 1
hpn:HPIN_00435 type II restriction enzyme R protein (hs K01155     277      517 (    -)     124    0.382    285     <-> 1
hef:HPF16_0104 Type II restriction enzyme protein       K01155     277      516 (    -)     123    0.367    286     <-> 1
pdt:Prede_2009 DpnII restriction endonuclease           K01155     277      514 (    -)     123    0.330    276     <-> 1
hpyo:HPOK113_0103 Type II restriction enzyme protein    K01155     275      509 (    -)     122    0.368    291     <-> 1
hhm:BN341_p1478 Type II restriction enzyme MjaIII (EC:3 K01155     284      503 (    -)     121    0.353    286     <-> 1
hpu:HPCU_00425 type II restriction enzyme R protein (hs K01155     277      502 (    -)     120    0.367    286     <-> 1
hhp:HPSH112_00440 type II restriction enzyme R protein  K01155     277      501 (    -)     120    0.367    286     <-> 1
heb:U063_0435 Type II restriction enzyme MjaIII (EC:3.1 K01155     252      497 (    -)     119    0.379    269     <-> 1
hez:U064_0436 Type II restriction enzyme MjaIII (EC:3.1 K01155     252      497 (    -)     119    0.379    269     <-> 1
mst:Msp_0144 type II restriction-modification system, r K01155     286      497 (    -)     119    0.330    306     <-> 1
mcd:MCRO_0752 type II restriction endonuclease (EC:3.1. K01155     310      494 (    -)     118    0.358    310     <-> 1
mgj:MGM1_5010 type II restriction enzyme DpnII                     285      492 (    -)     118    0.334    293     <-> 1
sapi:SAPIS_v1c04340 type II restriction enzyme          K01155     282      485 (    -)     116    0.316    294     <-> 1
hpp:HPP12_0094 type II R-M system restriction endonucle K01155     258      470 (    -)     113    0.375    272     <-> 1
thb:N186_01200 hypothetical protein                     K01155     302      469 (    -)     113    0.312    292     <-> 1
hbi:HBZC1_18460 type II restriction enzyme MjaIII (EC:3 K01155     278      468 (    -)     113    0.345    284     <-> 1
hfe:HFELIS_11740 Type II restriction enzyme R protein ( K01155     272      462 (    -)     111    0.360    283     <-> 1
lge:C269_06475 putative type II restriction endonucleas K01155     306      451 (    -)     109    0.302    291     <-> 1
hpg:HPG27_84 type II restriction enzyme protein         K01155     237      422 (    -)     102    0.363    256     <-> 1
smu:SMU_506 type II restriction endonuclease            K01155     312      418 (    -)     101    0.314    315     <-> 1
smc:SmuNN2025_1466 type II restriction endonuclease     K01155     312      413 (    -)     100    0.311    315     <-> 1
smj:SMULJ23_1485 putative type II restriction endonucle K01155     312      413 (    -)     100    0.311    315     <-> 1
smut:SMUGS5_02195 type II restriction endonuclease      K01155     312      413 (    -)     100    0.311    315     <-> 1
seps:DP17_55 dpnII restriction endonuclease family prot K01155     300      403 (    -)      98    0.308    318     <-> 1
hpd:KHP_0095 type II restriction endonuclease                      221      400 (    -)      97    0.362    235     <-> 1
mfr:MFE_01240 type II restriction enzyme (EC:3.1.21.4)  K01155     217      400 (    -)      97    0.339    227     <-> 1
mbv:MBOVPG45_0560 type II restriction endonuclease                 308      399 (    -)      97    0.287    300     <-> 1
sad:SAAV_0819 DNA adenine methylase                     K01155     322      392 (    -)      95    0.294    279     <-> 1
saua:SAAG_02518 DNA adenine methylase                   K06223     553      391 (    -)      95    0.294    279      -> 1
mal:MAGa2710 type II restriction endonuclease           K01155     309      386 (    -)      94    0.293    300     <-> 1
mhp:MHP7448_0622 DNA adenine methylase (EC:2.1.1.72)    K06223     549      366 (    -)      89    0.312    282      -> 1
mhyo:MHL_2964 DNA adenine methylase                     K06223     549      366 (    -)      89    0.312    282      -> 1
mhj:MHJ_0623 DNA adenine methylase (EC:2.1.1.72)        K06223     549      364 (    -)      89    0.316    282      -> 1
mhn:MHP168_630 DNA adenine methylase                    K06223     549      364 (    -)      89    0.316    282      -> 1
mhyl:MHP168L_630 DNA adenine methylase                  K06223     549      364 (    -)      89    0.316    282      -> 1
mhy:mhp641 DNA adenine methylase                        K06223     549      363 (    -)      89    0.316    282      -> 1
heq:HPF32_0102 Type II restriction enzyme protein                  199      352 (  175)      86    0.357    213     <-> 2
mpv:PRV_00245 hypothetical protein                                 165      335 (    -)      82    0.365    159     <-> 1
hpo:HMPREF4655_20363 type II site-specific deoxyribonuc            180      329 (    -)      81    0.405    158     <-> 1
hcp:HCN_1176 hypothetical protein                                  143      249 (    -)      63    0.360    139     <-> 1
hcb:HCBAA847_0792 hypothetical protein                             143      248 (   78)      62    0.390    141     <-> 2
hce:HCW_01250 type II site-specific deoxyribonuclease               73      239 (    -)      60    0.527    74      <-> 1
maa:MAG_2580 hypothetical protein                                  149      220 (    -)      56    0.324    139     <-> 1
amt:Amet_1692 integral membrane sensor signal transduct            467      131 (    -)      36    0.335    176      -> 1
tet:TTHERM_00344200 hypothetical protein                          1102      120 (    -)      33    0.365    63      <-> 1
caw:Q783_10495 deoxyribose-phosphate aldolase           K01619     230      119 (    -)      33    0.351    74       -> 1
cyt:cce_2326 hypothetical protein                                   40      115 (    -)      32    0.517    29      <-> 1
crn:CAR_c23090 deoxyribose-phosphate aldolase (EC:4.1.2 K01619     211      112 (    -)      31    0.329    82       -> 1
ccl:Clocl_1088 aspartate-ammonia ligase (EC:6.3.1.1)    K01914     337      111 (    -)      31    0.338    74       -> 1
pho:PH1015 hypothetical protein                                    272      110 (    -)      31    0.301    93      <-> 1
nte:NEUTE1DRAFT130177 hypothetical protein                        2327      109 (    -)      31    0.321    140      -> 1
bmx:BMS_0494 hypothetical protein                                  873      108 (    -)      30    0.353    116      -> 1
kvl:KVU_1849 TonB-dependent heme/hemoglobin receptor fa K16087    1121      108 (    -)      30    0.333    78      <-> 1
kvu:EIO_2309 TonB-dependent heme/hemoglobin receptor fa K16087    1121      108 (    -)      30    0.333    78      <-> 1
mtr:MTR_5g061300 TNP1                                              590      108 (    -)      30    0.314    86      <-> 1
smo:SELMODRAFT_99426 hypothetical protein                          581      107 (    -)      30    0.311    103     <-> 1
fve:101304082 insulin-degrading enzyme-like             K01411     953      106 (    -)      30    0.302    96      <-> 1
lby:Lbys_2008 tonb-dependent receptor plug                        1054      106 (    -)      30    0.331    130     <-> 1
pop:POPTR_0001s36250g hypothetical protein                         804      105 (    -)      30    0.300    100     <-> 1
dosa:Os06t0716700-01 Similar to Heat shock protein 90.  K09487     498      104 (    -)      30    0.303    119     <-> 1
efau:EFAU085_p3030 hypothetical protein                            170      104 (    -)      30    0.321    81      <-> 1
efu:HMPREF0351_12731 hypothetical protein                          170      104 (    -)      30    0.321    81      <-> 1
opr:Ocepr_1075 ribose-5-phosphate isomerase             K01807     227      104 (    -)      30    0.304    125     <-> 1
osa:4342077 Os06g0716700                                K09487     810      104 (    -)      30    0.303    119     <-> 1
pyo:PY04525 hypothetical protein                                   306      104 (    -)      30    0.300    90      <-> 1
tva:TVAG_210520 hypothetical protein                               440      104 (    -)      30    0.306    121     <-> 1
bpg:Bathy13g00070 hypothetical protein                            2112      103 (    -)      29    0.316    79      <-> 1
btu:BT0633 exodeoxyribonuclease V beta chain (EC:3.1.11 K03582    1147      103 (    -)      29    0.312    80       -> 1
gxl:H845_2733 lipopolysaccharide biosynthesis protein   K10107     315      103 (    -)      29    0.306    124     <-> 1
mjh:JH146_0185 Radical SAM domain protein               K06936     295      103 (    -)      29    0.307    140     <-> 1
alt:ambt_19645 50S ribosomal protein L10                K02864     172      102 (    -)      29    0.321    106     <-> 1
bama:RBAU_2118 hypothetical protein                                300      102 (    -)      29    0.333    117     <-> 1
bjs:MY9_1203 integral inner membrane protein                       309      102 (    -)      29    0.321    56      <-> 1
cbk:CLL_A0746 hypothetical protein                                 320      102 (    -)      29    0.306    98      <-> 1
cci:CC1G_03746 transporter particle subunit trs31                  243      102 (    -)      29    0.316    79      <-> 1
cja:CJA_2502 hypothetical protein                                 2160      102 (    -)      29    0.348    69      <-> 1
cle:Clole_2811 pectinesterase (EC:3.1.1.11)             K01051     729      102 (    -)      29    0.301    93       -> 1
mlo:mll6686 short-chain dehydrogenase                   K07124     276      102 (    -)      29    0.304    112      -> 1
mno:Mnod_6107 hypothetical protein                                 146      102 (    2)      29    0.314    86      <-> 2
phu:Phum_PHUM216870 hypothetical protein                           133      102 (    -)      29    0.323    127     <-> 1
pper:PRUPE_ppa001487mg hypothetical protein             K09487     815      102 (    -)      29    0.348    89      <-> 1
pra:PALO_02290 basic membrane lipoprotein               K07335     373      102 (    -)      29    0.313    147      -> 1
psoj:PHYSODRAFT_316363 hypothetical protein                        408      102 (    -)      29    0.301    73       -> 1
sbb:Sbal175_2329 exodeoxyribonuclease V subunit beta    K03582    1273      102 (    -)      29    0.321    78       -> 1
sol:Ssol_1797 RNase P subunit p30                       K03539     186      102 (    -)      29    0.324    108     <-> 1
sso:SSO0740 hypothetical protein                        K03539     186      102 (    -)      29    0.324    108     <-> 1
ccb:Clocel_2693 3-dehydroquinate synthase (EC:4.2.3.4)  K01735     378      101 (    -)      29    0.312    93      <-> 1
clh:IX49_12225 hypothetical protein                                937      101 (    -)      29    0.322    87      <-> 1
cly:Celly_2441 Two component regulator three Y domain-c            937      101 (    -)      29    0.322    87      <-> 1
pcy:PCYB_061980 hypothetical protein                              1534      101 (    -)      29    0.330    88      <-> 1
pmos:O165_021785 DNA-binding protein                               306      101 (    -)      29    0.341    91      <-> 1
pmum:103321235 endoplasmin homolog                      K09487     815      101 (    -)      29    0.348    89      <-> 1
sla:SERLADRAFT_416494 hypothetical protein                         553      101 (    -)      29    0.307    88       -> 1
sphm:G432_16215 polyhydroxyalkanoate depolymerase       K05973     408      101 (    -)      29    0.433    60       -> 1
ape:APE_0960 hypothetical protein                                  384      100 (    -)      29    0.344    96       -> 1
bbg:BGIGA_017 hypothetical protein                                 547      100 (    -)      29    0.309    110     <-> 1
bmy:Bm1_49805 Solo                                                 472      100 (    -)      29    0.338    65      <-> 1
cgi:CGB_E3480C hypothetical protein                                378      100 (    -)      29    0.323    124     <-> 1
cpe:CPE1978 asparagine synthetase AsnA (EC:6.3.1.1)     K01914     336      100 (    -)      29    0.311    74       -> 1
fma:FMG_1294 ATP dependent helicase                                748      100 (    -)      29    0.352    108     <-> 1
sbl:Sbal_2279 exodeoxyribonuclease V subunit beta       K03582    1273      100 (    0)      29    0.321    78       -> 2
sbm:Shew185_2047 exodeoxyribonuclease V subunit beta    K03582    1273      100 (    -)      29    0.321    78       -> 1
sbs:Sbal117_2403 exodeoxyribonuclease V subunit beta    K03582    1273      100 (    -)      29    0.321    78       -> 1
tcc:TCM_015018 Cytochrome P450, putative isoform 1                 326      100 (    -)      29    0.312    80      <-> 1
tpf:TPHA_0A02910 hypothetical protein                   K16912     501      100 (    -)      29    0.333    69      <-> 1

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