SSDB Best Search Result

KEGG ID :hin:HI1393 (300 a.a.)
Definition:type II restriction endonuclease; K01155 type II restriction enzyme
Update status:T00001 (abaa,abau,abk,abw,axs,babo,bamy,bhm,bmal,bsui,bthe,ced,cem,cen,cft,cfx,cgj,cgq,echp,echv,echw,ecla,eclc,efq,kln,kom,kph,kpk,kpq,kpz,law,lsj,mak,mavr,may,maz,mbz,mcat,ngi,ocu,paea,paee,paef,paeh,paej,paen,paeq,pbd,pcp,pda,pfn,pgm,pmul,pod,prh,pste,pstu,psw,sagc,seps,sgu,smia,smub,sthe,synd,synk,synr,xfl,xfs,zmc : calculation not yet completed)
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Search Result : 156 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
hiu:HIB_15650 hypothetical protein                                 258     1628 (    -)     377    0.988    258     <-> 1
hpak:JT17_05995 restriction endonuclease HindIII                   303     1474 (    -)     342    0.753    299     <-> 1
oac:Oscil6304_4535 HindIII restriction endonuclease                304      476 (    -)     114    0.344    299     <-> 1
bbh:BN112_3111 restriction endonuclease                            329      434 (    -)     105    0.304    286     <-> 1
bbm:BN115_0292 restriction endonuclease                            327      434 (    -)     105    0.304    286     <-> 1
bbr:BB0306 restriction endonuclease                                329      434 (    -)     105    0.304    286     <-> 1
bpa:BPP0303 restriction endonuclease                               344      434 (    -)     105    0.304    286     <-> 1
bpc:BPTD_0202 putative restriction endonuclease                    333      434 (    -)     105    0.304    286     <-> 1
bpe:BP0204 restriction endonuclease                                333      434 (    -)     105    0.304    286     <-> 1
bper:BN118_0560 restriction endonuclease                           333      434 (    -)     105    0.304    286     <-> 1
bpar:BN117_0301 restriction endonuclease                           329      429 (    -)     104    0.301    286     <-> 1
gma:AciX8_0027 Restriction endonuclease, type II, HindI            304      404 (    -)      98    0.325    249     <-> 1
mcd:MCRO_0463 hypothetical protein                                1784      152 (    -)      40    0.260    292     <-> 1
hpys:HPSA20_1588 hypothetical protein                               95      131 (    -)      36    0.309    94      <-> 1
pub:SAR11_0443 phenylalanine-tRNA ligase (EC:6.1.1.20)  K01890     802      129 (    -)      35    0.301    123      -> 1
hes:HPSA_07245 hypothetical protein                                 95      128 (    -)      35    0.309    94      <-> 1
abt:ABED_0730 hypothetical protein                      K03826     141      126 (   20)      35    0.329    70      <-> 2
cic:CICLE_v10033890mg hypothetical protein                         172      124 (    -)      34    0.303    76      <-> 1
cbe:Cbei_1367 hypothetical protein                                 193      122 (    -)      34    0.306    108     <-> 1
gmx:100815419 mediator of RNA polymerase II transcripti            141      122 (   10)      34    0.356    87      <-> 3
pcb:PC001340.02.0 hypothetical protein                             345      122 (    -)      34    0.308    104     <-> 1
bhr:BH0632 exodeoxyribonuclease V alpha chain (EC:3.1.1 K03581     608      120 (    -)      33    0.310    126      -> 1
pyo:PY03578 hypothetical protein                                  1527      119 (    9)      33    0.300    120      -> 7
abl:A7H1H_0769 hypothetical protein                     K03826     141      118 (    -)      33    0.314    70      <-> 1
pfa:PF11_0342 conserved Plasmodium protein                        2072      116 (    7)      32    0.302    96      <-> 7
pfd:PFDG_00325 conserved hypothetical protein                     2045      116 (    7)      32    0.302    96       -> 5
pfh:PFHG_04326 conserved hypothetical protein                     2044      116 (    7)      32    0.302    96       -> 7
lla:L64445 hypothetical protein                         K04516      90      114 (    7)      32    0.342    76      <-> 2
lld:P620_12900 hypothetical protein                     K04516      90      114 (    -)      32    0.342    76      <-> 1
llk:LLKF_2442 chorismate mutase (EC:5.4.99.5)           K04516      90      114 (    -)      32    0.342    76      <-> 1
lls:lilo_2170 putative chorismate mutase                K04516      90      114 (    -)      32    0.342    76      <-> 1
llt:CVCAS_2225 chorismate mutase (EC:5.4.99.5)          K04516      90      114 (    -)      32    0.342    76      <-> 1
mpi:Mpet_1649 hypothetical protein                                 208      114 (    -)      32    0.306    98      <-> 1
tet:TTHERM_01180980 hypothetical protein                          2806      114 (    8)      32    0.352    122     <-> 5
lan:Lacal_1087 hypothetical protein                                541      113 (    8)      32    0.352    91      <-> 2
ptm:GSPATT00022664001 hypothetical protein                        1006      113 (    3)      32    0.300    160     <-> 6
pvu:PHAVU_002G266700g hypothetical protein                         141      113 (    -)      32    0.348    69      <-> 1
ccb:Clocel_2638 hypothetical protein                               145      112 (    1)      31    0.312    128     <-> 4
ehi:EHI_035820 hypothetical protein                                700      112 (    -)      31    0.343    105      -> 1
bpi:BPLAN_425 ferritin-like protein                     K02217     175      111 (    -)      31    0.309    97       -> 1
csb:CLSA_c03150 methyl-accepting chemotaxis protein     K03406     571      111 (    -)      31    0.314    102     <-> 1
btm:MC28_0500 Immune inhibitor A (EC:3.4.24.-)                     125      110 (    0)      31    0.303    89      <-> 2
cbt:CLH_1769 hypothetical protein                       K07007     406      110 (    -)      31    0.373    75       -> 1
cco:CCC13826_1090 hypothetical protein                             821      110 (    -)      31    0.344    64      <-> 1
mpz:Marpi_1207 molecular chaperone GrpE                 K03687     212      110 (    -)      31    0.308    120     <-> 1
mvn:Mevan_1310 N-6 DNA methylase                                  1041      110 (    -)      31    0.340    100     <-> 1
pel:SAR11G3_01035 UDP pyrophosphate synthetase (EC:2.5. K00806     217      110 (    -)      31    0.306    124      -> 1
ccp:CHC_T00009352001 diaminopimelate decarboxylase      K01586     480      109 (    -)      31    0.312    93       -> 1
cni:Calni_1337 tetratricopeptide tpr_1 repeat-containin            910      109 (    -)      31    0.331    124     <-> 1
ffo:FFONT_1222 N2,N2-dimethylguanosine tRNA methyltrans K00555     389      109 (    -)      31    0.314    86      <-> 1
chy:CHY_1752 ABC transporter ATP-binding protein        K02013     261      108 (    -)      30    0.313    99       -> 1
cin:101243503 uncharacterized LOC101243503                         224      108 (    -)      30    0.333    78      <-> 1
ddf:DEFDS_0757 hypothetical protein                                792      108 (    -)      30    0.305    95      <-> 1
mrr:Moror_6303 topoisomerase i                          K03163     879      108 (    -)      30    0.303    89      <-> 1
ppn:Palpr_1131 lyttr DNA-binding region                            284      108 (    -)      30    0.300    100     <-> 1
tau:Tola_2287 hypothetical protein                                 205      108 (    -)      30    0.301    143     <-> 1
ani:AN5028.2 hypothetical protein                       K17862    1117      107 (    -)      30    0.303    89      <-> 1
api:100570743 myb-like protein X                                   377      107 (    -)      30    0.311    106     <-> 1
bbj:BbuJD1_0287 flagellar protein                                  143      107 (    4)      30    0.303    89      <-> 3
bbz:BbuZS7_0293 flagellar protein                                  143      107 (    -)      30    0.303    89      <-> 1
cyc:PCC7424_4370 DNA polymerase beta domain-containing  K07075     132      107 (    -)      30    0.415    41      <-> 1
ddi:DDB_G0272112 hypothetical protein                             2245      107 (    4)      30    0.301    113      -> 2
dgr:Dgri_GH16072 GH16072 gene product from transcript G K10951    1162      107 (    0)      30    0.330    106     <-> 4
dmo:Dmoj_GI18926 GI18926 gene product from transcript G K04962    5175      107 (    7)      30    0.310    113     <-> 2
orh:Ornrh_0778 hypothetical protein                                713      107 (    -)      30    0.333    96      <-> 1
ori:Q785_04435 ATPase AAA                                          713      107 (    -)      30    0.333    96      <-> 1
psn:Pedsa_3712 hypothetical protein                                939      107 (    -)      30    0.310    126     <-> 1
rrs:RoseRS_2594 amine oxidase                           K00274     478      107 (    -)      30    0.305    82      <-> 1
sdi:SDIMI_v3c00050 seryl-tRNA synthetase                K01875     421      107 (    -)      30    0.310    100      -> 1
smh:DMIN_01310 protein translocase subunit secA         K03070    1020      107 (    -)      30    0.305    118      -> 1
sms:SMDSEM_004 valyl-tRNA synthetase                    K01873     857      107 (    -)      30    0.361    108      -> 1
bor:COCMIDRAFT_84948 hypothetical protein                          620      106 (    -)      30    0.344    61      <-> 1
cjc:100391280 coiled-coil domain-containing protein 14  K16541     904      106 (    -)      30    0.306    111     <-> 1
dha:DEHA2F23188g DEHA2F23188p                           K11681    1616      106 (    -)      30    0.315    143      -> 1
kaf:KAFR_0F03290 hypothetical protein                   K03869     770      106 (    -)      30    0.319    116     <-> 1
rae:G148_1810 hypothetical protein                                 546      106 (    -)      30    0.308    104     <-> 1
tbl:TBLA_0A04410 hypothetical protein                              732      106 (    5)      30    0.300    90       -> 2
bbu:BB_0287 flagellar protein FlbA                      K02382     143      105 (    1)      30    0.303    89      <-> 2
bbur:L144_01415 flagellar protein FlbA                             143      105 (    -)      30    0.303    89      <-> 1
csr:Cspa_c37280 pirin-like protein                      K06911     233      105 (    1)      30    0.312    109     <-> 2
ctp:CTRG_00182 similar to potential fungal zinc cluster           1108      105 (    3)      30    0.301    123     <-> 2
pbe:PB000157.00.0 hypothetical protein                             687      105 (    1)      30    0.323    96      <-> 2
pop:POPTR_0015s05920g hypothetical protein                        1062      105 (    -)      30    0.308    104     <-> 1
smg:SMGWSS_135 translocase                              K03070    1018      105 (    -)      30    0.305    118      -> 1
tru:101066597 apolipoprotein B-100-like                 K14462    3283      105 (    -)      30    0.323    99      <-> 1
bbn:BbuN40_Q32 hypothetical protein                                365      104 (    3)      30    0.317    101     <-> 2
der:Dere_GG22169 GG22169 gene product from transcript G K17550     326      104 (    -)      30    0.333    72       -> 1
dya:Dyak_GE10125 GE10125 gene product from transcript G K17550     326      104 (    -)      30    0.333    72      <-> 1
mcn:Mcup_1233 SMC domain-containing protein                        585      104 (    -)      30    0.318    107     <-> 1
mtr:MTR_8g092180 hypothetical protein                              115      104 (    -)      30    0.352    71      <-> 1
pml:ATP_00176 replicative DNA helicase (EC:3.6.1.-)     K02314     450      104 (    -)      30    0.301    83       -> 1
srb:P148_SR1C001G0847 hypothetical protein                         193      104 (    -)      30    0.301    73      <-> 1
vir:X953_18555 protease                                 K09607     792      104 (    -)      30    0.303    132     <-> 1
aal:EP13_02340 N-acetyl-gamma-glutamyl-phosphate reduct K00145     337      103 (    -)      29    0.360    86       -> 1
bba:Bd2653 5'-methylthioadenosine nucleosidase (EC:3.2. K01243     240      103 (    -)      29    0.308    133      -> 1
cbk:CLL_A1803 hypothetical protein                      K07007     406      103 (    -)      29    0.360    75       -> 1
crb:CARUB_v10004062mg hypothetical protein                         993      103 (    -)      29    0.357    84      <-> 1
dpp:DICPUDRAFT_20066 hypothetical protein                          296      103 (    -)      29    0.333    93      <-> 1
efa:EF3220 hypothetical protein                                   1210      103 (    -)      29    0.316    95      <-> 1
ncs:NCAS_0B04910 hypothetical protein                             1176      103 (    -)      29    0.303    142      -> 1
ndl:NASALF_145 aspartyl/glutamyl-tRNA(Asn/Gln) amidotra K02434     465      103 (    -)      29    0.308    182     <-> 1
pat:Patl_1460 metal dependent phosphohydrolase                     384      103 (    -)      29    0.301    73      <-> 1
pmw:B2K_01660 hypothetical protein                      K07093     552      103 (    -)      29    0.344    61      <-> 1
rlt:Rleg2_6121 citrate lyase subunit alpha (EC:2.8.3.10 K01643     508      103 (    -)      29    0.304    102      -> 1
smf:Smon_0939 hypothetical protein                                 685      103 (    -)      29    0.337    83      <-> 1
tup:102469053 RAB3 GTPase activating protein subunit 2            1392      103 (    -)      29    0.310    87      <-> 1
tva:TVAG_032740 hypothetical protein                               397      103 (    0)      29    0.333    84      <-> 2
wed:wNo_00290 Valyl-tRNA synthetase                     K01873     822      103 (    -)      29    0.305    95       -> 1
woo:wOo_05280 peptide chain release factor 1            K02835     373      103 (    -)      29    0.311    106      -> 1
wpi:WPa_0097 valyl-tRNA synthetase                      K01873     857      103 (    -)      29    0.305    95       -> 1
bbac:EP01_09380 5'-methylthioadenosine nucleosidase     K01243     240      102 (    -)      29    0.308    133      -> 1
dpo:Dpse_GA10593 GA10593 gene product from transcript G K04962    5131      102 (    -)      29    0.301    113     <-> 1
edi:EDI_330790 hypothetical protein                                154      102 (    -)      29    0.302    106     <-> 1
lgi:LOTGIDRAFT_202434 hypothetical protein              K03234     824      102 (    -)      29    0.321    84       -> 1
ola:101154938 EF-hand calcium-binding domain-containing            614      102 (    -)      29    0.337    86      <-> 1
pgu:PGUG_01245 hypothetical protein                     K15255     229      102 (    -)      29    0.333    114     <-> 1
pvx:PVX_114885 hypothetical protein                               1475      102 (    -)      29    0.325    80      <-> 1
ame:102655319 inner centromere protein A-like                      749      101 (    -)      29    0.300    80       -> 1
asb:RATSFB_0981 cellobiose phosphorylase                          1108      101 (    -)      29    0.434    53      <-> 1
bfi:CIY_05650 helicase, putative, RecD/TraA family (EC: K03581     724      101 (    -)      29    0.319    69       -> 1
clu:CLUG_03696 hypothetical protein                                285      101 (    -)      29    0.303    109     <-> 1
dme:Dmel_CG10844 Ryanodine receptor                     K04962    5115      101 (    -)      29    0.303    119     <-> 1
dvi:Dvir_GJ21297 GJ21297 gene product from transcript G K04962    5131      101 (    -)      29    0.301    113     <-> 1
fnu:FN0527 alanyl-tRNA synthetase (EC:6.1.1.7)          K07050     373      101 (    -)      29    0.315    165      -> 1
gag:Glaag_3555 cytochrome c oxidase accessory protein C            475      101 (    -)      29    0.307    114      -> 1
gfo:GFO_2694 cell division protease FtsH (EC:3.4.24.-)  K03798     686      101 (    -)      29    0.358    81       -> 1
hlr:HALLA_03240 hypothetical protein                               455      101 (    -)      29    0.309    94      <-> 1
mae:Maeo_1493 peptidase U62 modulator of DNA gyrase     K03592     420      101 (    -)      29    0.320    103      -> 1
ngr:NAEGRDRAFT_88158 kinesin                                      1090      101 (    -)      29    0.377    53      <-> 1
rai:RA0C_2071 hypothetical protein                                 546      101 (    -)      29    0.317    104     <-> 1
ran:Riean_1774 hypothetical protein                                562      101 (    -)      29    0.317    104     <-> 1
rar:RIA_0398 hypothetical protein                                  232      101 (    -)      29    0.317    104     <-> 1
rlg:Rleg_5572 thiamine pyrophosphate protein domain pro K00156     600      101 (    -)      29    0.333    99       -> 1
slr:L21SP2_1103 putative ATP-dependent endonuclease, OL            579      101 (    -)      29    0.340    103     <-> 1
tcc:TCM_030368 E3 ubiquitin-protein ligase UPL5         K10591     899      101 (    -)      29    0.309    81      <-> 1
tpf:TPHA_0B01020 hypothetical protein                              501      101 (    -)      29    0.323    130     <-> 1
tpx:Turpa_1445 alkyl hydroperoxide reductase/Thiol spec            264      101 (    -)      29    0.377    53       -> 1
zro:ZYRO0D03828g hypothetical protein                   K17970     726      101 (    -)      29    0.305    167     <-> 1
arc:ABLL_1692 hypothetical protein                                1288      100 (    -)      29    0.315    130     <-> 1
cam:101509964 mediator of RNA polymerase II transcripti            143      100 (    -)      29    0.300    70      <-> 1
cbl:CLK_3752 xaa-pro aminopeptidase (EC:3.4.11.9)       K01262     411      100 (    -)      29    0.301    83       -> 1
cby:CLM_0999 hypothetical protein                       K06911     233      100 (    -)      29    0.300    130     <-> 1
cdg:CDBI1_19863 Transcriptional regulator, XRE family p            400      100 (    -)      29    0.319    72      <-> 1
cjer:H730_00810 hypothetical protein                               312      100 (    -)      29    0.301    136     <-> 1
ckn:Calkro_1724 regulator of chromosome condensation rc            743      100 (    -)      29    0.302    106     <-> 1
cpv:cgd1_3070 multidomain protein with a conserved euka K14772    3779      100 (    -)      29    0.366    82       -> 1
csv:101210394 mediator of RNA polymerase II transcripti            141      100 (    -)      29    0.314    70       -> 1
ctes:O987_02395 flagellar motor switch protein FliG     K02410     333      100 (    -)      29    0.315    92      <-> 1
cthr:CTHT_0036070 putative integral membrane protein               371      100 (    -)      29    0.310    100     <-> 1
ctt:CtCNB1_0459 flagellar motor switch protein FliG     K02410     333      100 (    -)      29    0.315    92      <-> 1
dan:Dana_GF18144 GF18144 gene product from transcript G K17550     327      100 (    -)      29    0.333    72      <-> 1
dwi:Dwil_GK20853 GK20853 gene product from transcript G            567      100 (    -)      29    0.324    68       -> 1
gur:Gura_1781 metal dependent phosphohydrolase          K07037     798      100 (    -)      29    0.333    93      <-> 1
hgl:101727098 probable G-protein coupled receptor 19-li K04316     335      100 (    -)      29    0.307    101     <-> 1
mbc:MYB_01185 hypothetical protein                                 322      100 (    -)      29    0.301    103     <-> 1
rbr:RBR_18160 DNA ligase, NAD-dependent (EC:6.5.1.2)    K01972     661      100 (    -)      29    0.328    119      -> 1

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