SSDB Best Search Result

KEGG ID :nmc:NMC0680 (351 a.a.)
Definition:type II restriction enzyme NmeDIP; K01155 type II restriction enzyme
Update status:T00458 (babb,babt,blz,brp,bsul,bsus,bsut,bthr,bww,ecle,ero,fpu,hia,hir,kpb,kpg,kpv,kpw,kpy,llx,mde,mgj,mus,nmx,nte,pacn,pant,ppud,psoj,pxb,sagt,spyo,tot,trm,vcy,vda,vtu,wic : calculation not yet completed)
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Search Result : 168 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
nmd:NMBG2136_0676 hypothetical protein                             341     2259 (    -)     521    0.997    341     <-> 1
pta:HPL003_26785 putative type II restriction enzyme Nm            362     1297 (    -)     301    0.567    356     <-> 1
ecr:ECIAI1_4499 putative type II restriction enzyme Nme K01155     358     1259 (    -)     293    0.521    359     <-> 1
sus:Acid_1688 type II site-specific deoxyribonuclease ( K01155     298     1137 (  951)     265    0.563    295     <-> 2
pat:Patl_0726 type II site-specific deoxyribonuclease   K01155     358      923 (    -)     216    0.420    357     <-> 1
dol:Dole_2715 hypothetical protein                                 478      307 (    -)      76    0.311    196     <-> 1
mch:Mchl_1009 hypothetical protein                                 430      286 (    -)      71    0.323    195     <-> 1
mdi:METDI1340 hypothetical protein                                 430      286 (    -)      71    0.323    195     <-> 1
mea:Mex_2p0101 hypothetical protein                                430      286 (    -)      71    0.323    195     <-> 1
ack:C380_05645 hypothetical protein                                420      272 (    6)      68    0.349    149     <-> 2
xau:Xaut_4599 hypothetical protein                                 438      256 (   13)      64    0.340    150     <-> 2
byi:BYI23_A025330 hypothetical protein                             419      255 (    -)      64    0.345    148     <-> 1
adk:Alide2_3383 hypothetical protein                               420      246 (   10)      62    0.322    149     <-> 2
pna:Pnap_4564 hypothetical protein                                 420      246 (    -)      62    0.305    197     <-> 1
ajs:Ajs_1486 hypothetical protein                                  420      244 (    8)      61    0.322    149     <-> 2
mpo:Mpop_2541 hypothetical protein                                 430      242 (    -)      61    0.324    145     <-> 1
bbt:BBta_p0135 hypothetical protein                                430      240 (    -)      61    0.309    149     <-> 1
fau:Fraau_1438 hypothetical protein                                425      238 (    -)      60    0.329    149     <-> 1
dge:Dgeo_2577 hypothetical protein                                 383      236 (    -)      60    0.322    152     <-> 1
apk:APA386B_1661 hypothetical protein                              425      233 (    -)      59    0.338    151     <-> 1
salv:SALWKB2_0455 hypothetical protein                             369      233 (    -)      59    0.274    226     <-> 1
ank:AnaeK_3271 hypothetical protein                                419      227 (    -)      58    0.317    167     <-> 1
gxl:H845_3472 putative type II restriction enzyme                  425      225 (    -)      57    0.322    149     <-> 1
ooe:OEOE_0742 hypothetical protein                                 407      222 (    -)      56    0.305    164     <-> 1
rme:Rmet_6120 type II site-specific deoxyribonuclease (            421      221 (    -)      56    0.309    149     <-> 1
goh:B932_3248 hypothetical protein                                 425      220 (    -)      56    0.314    156     <-> 1
sch:Sphch_4091 hypothetical protein                                431      218 (    -)      56    0.312    157     <-> 1
sjp:SJA_C1-05270 hypothetical protein                              431      218 (    -)      56    0.312    157     <-> 1
ssy:SLG_p_00490 hypothetical protein                               431      218 (    -)      56    0.312    157     <-> 1
gxy:GLX_30330 hypothetical protein                                 425      217 (    -)      55    0.315    149     <-> 1
plm:Plim_3239 hypothetical protein                                 363      217 (    -)      55    0.278    169     <-> 1
cga:Celgi_0121 hypothetical protein                                438      216 (    -)      55    0.322    143     <-> 1
cak:Caul_2312 hypothetical protein                                 426      214 (    -)      55    0.298    151     <-> 1
dsu:Dsui_1063 hypothetical protein                                 418      214 (    -)      55    0.284    190     <-> 1
aoe:Clos_1062 hypothetical protein                                 418      212 (    -)      54    0.239    234     <-> 1
zmp:Zymop_0098 hypothetical protein                                421      211 (    -)      54    0.313    150     <-> 1
rpi:Rpic_1835 hypothetical protein                                 440      210 (    4)      54    0.302    149     <-> 2
npp:PP1Y_AT24187 hypothetical protein                              427      209 (    -)      53    0.312    157     <-> 1
rpf:Rpic12D_5341 hypothetical protein                              421      206 (    5)      53    0.295    149     <-> 2
rcu:RCOM_2089160 hypothetical protein                              190      205 (    -)      53    0.293    188     <-> 1
psab:PSAB_12850 hypothetical protein                               419      202 (    -)      52    0.238    185     <-> 1
sal:Sala_2432 hypothetical protein                                 425      199 (    -)      51    0.299    157     <-> 1
baci:B1NLA3E_19510 hypothetical protein                            412      198 (    -)      51    0.255    165     <-> 1
tye:THEYE_A1956 hypothetical protein                               235      195 (    -)      50    0.272    191     <-> 1
geo:Geob_2517 hypothetical protein                                 417      194 (    -)      50    0.269    156     <-> 1
pbd:PBOR_17485 hypothetical protein                                420      193 (    -)      50    0.261    165     <-> 1
efm:M7W_23 hypothetical protein                                    421      192 (    -)      50    0.299    177     <-> 1
cla:Cla_0100 hypothetical protein                                  243      191 (    -)      49    0.283    159     <-> 1
hut:Huta_1708 hypothetical protein                                 348      191 (    -)      49    0.270    159     <-> 1
gba:J421_1015 hypothetical protein                                 418      190 (    -)      49    0.326    138     <-> 1
rfr:Rfer_4209 hypothetical protein                                 424      186 (    -)      48    0.283    159     <-> 1
can:Cyan10605_2429 hypothetical protein                            320      184 (    -)      48    0.300    180     <-> 1
mro:MROS_0750 hypothetical protein                                 237      181 (    -)      47    0.273    150     <-> 1
mar:MAE_32140 hypothetical protein                                 770      180 (   76)      47    0.253    293     <-> 2
sli:Slin_6905 hypothetical protein                                 418      180 (   15)      47    0.288    170     <-> 2
fae:FAES_pFAES01119 hypothetical protein                           413      179 (    -)      47    0.284    169     <-> 1
fjo:Fjoh_3075 hypothetical protein                                 414      176 (    -)      46    0.286    154     <-> 1
zpr:ZPR_4244 hypothetical protein                                  414      172 (   72)      45    0.274    157     <-> 2
cmp:Cha6605_1951 hypothetical protein                              417      169 (    -)      44    0.265    162     <-> 1
cha:CHAB381_0635 hypothetical protein                              242      166 (   14)      44    0.250    152     <-> 2
shn:Shewana3_4140 hypothetical protein                             411      164 (    -)      43    0.265    147     <-> 1
rsi:Runsl_5934 hypothetical protein                                416      163 (    -)      43    0.281    171     <-> 1
pru:PRU_1006 hypothetical protein                                  239      161 (    -)      43    0.291    151     <-> 1
bbd:Belba_2975 hypothetical protein                                416      155 (    -)      41    0.274    164     <-> 1
eol:Emtol_1122 hypothetical protein                                310      151 (   51)      40    0.309    152     <-> 2
caa:Caka_0933 organic solvent tolerance protein         K04744     711      123 (    -)      34    0.306    134     <-> 1
mmar:MODMU_2483 Zinc D-Ala-D-Ala carboxypeptidase (EC:3            222      122 (    -)      34    0.355    62      <-> 1
cam:101497318 PGR5-like protein 1B, chloroplastic-like             329      118 (    -)      33    0.333    81      <-> 1
rbc:BN938_2033 GMP synthase, glutamine-hydrolyzing (EC: K01951     509      116 (    -)      32    0.306    124      -> 1
sanc:SANR_1380 prephenate dehydrogenase (EC:1.3.1.12)   K04517     368      115 (    -)      32    0.329    79       -> 1
cre:CHLREDRAFT_171212 hypothetical protein                         815      114 (    3)      32    0.300    110      -> 2
mfu:LILAB_01350 putative tRNA modifying protein         K14441     476      113 (    -)      32    0.310    116      -> 1
koe:A225_4434 protein acetyltransferase                 K09181     892      111 (    -)      31    0.380    50       -> 1
kok:KONIH1_21825 protein acetyltransferase              K09181     892      111 (    -)      31    0.380    50       -> 1
kom:HR38_25745 protein acetyltransferase                K09181     892      111 (    -)      31    0.380    50       -> 1
kox:KOX_27625 CoA binding domain/acetyltransferase doma K09181     892      111 (    -)      31    0.380    50       -> 1
koy:J415_09840 protein lysine acetyltransferase         K09181     892      111 (    -)      31    0.380    50       -> 1
ngr:NAEGRDRAFT_56634 small GTPase                                  644      111 (    -)      31    0.310    142      -> 1
olu:OSTLU_31041 hypothetical protein                               215      111 (    -)      31    0.338    71       -> 1
suh:SAMSHR1132_09700 putative methylase                            180      111 (    -)      31    0.303    119      -> 1
gob:Gobs_1225 peptidoglycan-binding domain 1 protein               234      110 (    -)      31    0.355    62      <-> 1
mop:Mesop_1177 NAD-glutamate dehydrogenase              K15371    1596      110 (    -)      31    0.316    76      <-> 1
dfd:Desfe_0982 hypothetical protein                                347      109 (    -)      31    0.314    121     <-> 1
xbo:XBJ1_2113 exported protein (pentapeptide repaet pro            864      109 (    -)      31    0.314    86      <-> 1
ztr:MYCGRDRAFT_37896 hypothetical protein                          223      109 (    -)      31    0.312    109     <-> 1
kpe:KPK_1214 CoA binding domain/acetyltransferase domai K09181     883      108 (    -)      30    0.380    50       -> 1
mlo:mll4104 hypothetical protein                        K15371    1612      108 (    -)      30    0.316    76      <-> 1
mrb:Mrub_0165 ADP-ribosylation/Crystallin J1                       306      108 (    -)      30    0.314    102     <-> 1
mre:K649_00430 ADP-ribosylation/Crystallin J1                      306      108 (    -)      30    0.314    102     <-> 1
mxa:MXAN_1476 tRNA modifying protein                    K14441     476      108 (    -)      30    0.302    116      -> 1
mci:Mesci_1149 NAD-glutamate dehydrogenase              K15371    1604      107 (    -)      30    0.316    76      <-> 1
bbre:B12L_0122 Haloacid dehalogenase-like hydrolase (HA            223      106 (    -)      30    0.337    101      -> 1
bbrj:B7017_0147 Haloacid dehalogenase-like hydrolase (H            223      106 (    -)      30    0.337    101      -> 1
bbrs:BS27_0145 Haloacid dehalogenase-like hydrolase (HA            223      106 (    -)      30    0.337    101      -> 1
bbru:Bbr_0130 Haloacid dehalogenase-like hydrolase (HAD            223      106 (    -)      30    0.337    101      -> 1
bbv:HMPREF9228_0133 HAD hydrolase, family IA, variant 3            223      106 (    -)      30    0.337    101      -> 1
mam:Mesau_01196 NAD-specific glutamate dehydrogenase    K15371    1595      106 (    -)      30    0.303    76      <-> 1
svi:Svir_31050 hypothetical protein                                243      106 (    -)      30    0.307    75      <-> 1
hms:HMU09950 oxygen-independent coproporphyrinogen III  K02495     457      105 (    -)      30    0.314    102      -> 1
pfj:MYCFIDRAFT_80403 hypothetical protein                          482      105 (    -)      30    0.316    114     <-> 1
tru:101063979 KN motif and ankyrin repeat domain-contai           1344      105 (    -)      30    0.316    98      <-> 1
bbrn:B2258_0118 Haloacid dehalogenase-like hydrolase (H            223      104 (    -)      30    0.313    99       -> 1
bbrv:B689b_0119 Haloacid dehalogenase-like hydrolase (H            223      104 (    -)      30    0.313    99       -> 1
cnb:CNBD3680 hypothetical protein                                 1219      104 (    -)      30    0.368    57      <-> 1
cne:CND02670 endoplasmic reticulum protein                        1219      104 (    -)      30    0.368    57      <-> 1
hro:HELRODRAFT_185877 hypothetical protein              K03962     198      104 (    -)      30    0.308    91      <-> 1
pss:102449318 collagen, type XX, alpha 1                          1472      104 (    -)      30    0.347    72      <-> 1
rel:REMIM1_PF00388 alpha-mannosidase protein (EC:3.2.1. K01191    1008      104 (    -)      30    0.300    100     <-> 1
ret:RHE_PF00487 alpha-mannosidase (EC:3.2.1.24)         K01191     956      104 (    -)      30    0.300    100     <-> 1
sgn:SGRA_1422 glycerophosphoryl diester phosphodiestera K01126     324      104 (    -)      30    0.353    68      <-> 1
ame:725193 G patch domain-containing protein 2-like     K17569     473      103 (    -)      29    0.312    80      <-> 1
bbrc:B7019_0131 Haloacid dehalogenase-like hydrolase (H            223      103 (    -)      29    0.313    99       -> 1
cin:100177866 sodium channel protein type 4 subunit alp           1966      103 (    -)      29    0.308    78      <-> 1
dha:DEHA2F10274g DEHA2F10274p                                      970      103 (    -)      29    0.379    58      <-> 1
gym:GYMC10_3025 ABC transporter-like protein            K10112     374      103 (    -)      29    0.300    60       -> 1
kpa:KPNJ1_01371 Acetyl-CoA synthetase (EC:6.2.1.13)     K09181     886      103 (    -)      29    0.360    50       -> 1
kph:KPNIH24_08785 protein acetyltransferase             K09181     886      103 (    -)      29    0.360    50       -> 1
kpj:N559_1346 putative NAD(P)-binding and ATP-binding a K09181     883      103 (    -)      29    0.360    50       -> 1
kpm:KPHS_39790 putative NAD(P)-binding and ATP-binding  K09181     883      103 (    -)      29    0.360    50       -> 1
kpn:KPN_02907 putative acyl-CoA synthetase, NAD(P)-bind K09181     883      103 (    -)      29    0.360    50       -> 1
kpo:KPN2242_17605 putative acyl-CoA synthetase, NAD(P)- K09181     883      103 (    -)      29    0.360    50       -> 1
kpp:A79E_1195 protein acetyltransferase                 K09181     883      103 (    -)      29    0.360    50       -> 1
kpq:KPR0928_19435 protein acetyltransferase             K09181     886      103 (    -)      29    0.360    50       -> 1
kpr:KPR_1366 hypothetical protein                       K09181     883      103 (    -)      29    0.360    50       -> 1
kps:KPNJ2_01395 Acetyl-CoA synthetase (EC:6.2.1.13)     K09181     886      103 (    -)      29    0.360    50       -> 1
kpt:VK055_4594 acetyltransferase family protein         K09181     883      103 (    -)      29    0.360    50       -> 1
kpu:KP1_4164 putative NAD(P)-binding and ATP-binding ac K09181     883      103 (    -)      29    0.360    50       -> 1
kpx:PMK1_00404 Acetyltransferase Pat (EC:2.3.1.-)       K09181     883      103 (    -)      29    0.360    50       -> 1
kpz:KPNIH27_19325 protein acetyltransferase             K09181     883      103 (    -)      29    0.360    50       -> 1
tcr:510737.110 replication factor C, subunit 3          K10756     355      103 (    -)      29    0.307    75       -> 1
bct:GEM_4335 heavy metal sensor signal transduction his K07644     482      102 (    -)      29    0.415    41       -> 1
brs:S23_12280 hypothetical protein                      K07289     626      102 (    -)      29    0.304    171      -> 1
kvl:KVU_2439 pyruvate dehydrogenase complex repressor   K05799     255      102 (    -)      29    0.322    121      -> 1
kvu:EIO_0097 pyruvate dehydrogenase complex repressor   K05799     255      102 (    -)      29    0.322    121      -> 1
msl:Msil_1908 hypothetical protein                                 345      102 (    -)      29    0.356    90       -> 1
pop:POPTR_0002s11360g hypothetical protein                         422      102 (    -)      29    0.320    97      <-> 1
sgr:SGR_6785 type-I PKS                                           6889      102 (    -)      29    0.318    88       -> 1
azl:AZL_019180 trigger factor                           K03545     443      101 (    -)      29    0.315    124      -> 1
cgi:CGB_D5220W endoplasmic reticulum protein                      1268      101 (    -)      29    0.386    57      <-> 1
cthe:Chro_3942 serine/threonine protein kinase                     692      101 (    -)      29    0.314    118     <-> 1
fgr:FG08184.1 hypothetical protein                                1200      101 (    -)      29    0.305    82      <-> 1
kpk:A593_04765 protein acetyltransferase                K09181     883      101 (    -)      29    0.360    50       -> 1
kva:Kvar_1156 GCN5-like N-acetyltransferase             K09181     883      101 (    -)      29    0.360    50       -> 1
msd:MYSTI_01494 putative tRNA modifying protein         K14441     466      101 (    -)      29    0.302    116      -> 1
pan:PODANS72p167 hypothetical protein                              330      101 (    -)      29    0.301    136     <-> 1
pbi:103060736 zinc finger protein RFP-like                         500      101 (    -)      29    0.312    96      <-> 1
tpy:CQ11_09320 transcriptional regulator                           243      101 (    -)      29    0.306    85      <-> 1
abq:ABAZ39_26630 multidrug transporter                  K07788    1033      100 (    -)      29    0.311    132      -> 1
atr:s00001p00229750 hypothetical protein                           349      100 (    -)      29    0.330    91      <-> 1
blb:BBMN68_1244 pgmb2                                              223      100 (    -)      29    0.313    99       -> 1
blf:BLIF_0118 hypothetical protein                                 223      100 (    -)      29    0.313    99       -> 1
blg:BIL_18170 haloacid dehalogenase superfamily, subfam            243      100 (    -)      29    0.313    99       -> 1
blj:BLD_1305 beta-phosphoglucomutase                               223      100 (    -)      29    0.313    99       -> 1
blk:BLNIAS_02633 HAD-superfamily hydrolase                         223      100 (    -)      29    0.313    99       -> 1
blm:BLLJ_0129 hypothetical protein                                 223      100 (    -)      29    0.313    99       -> 1
blo:BL0511 hypothetical protein                                    223      100 (    -)      29    0.313    99       -> 1
bmor:101744544 uncharacterized LOC101744544                       2233      100 (    -)      29    0.311    148     <-> 1
cpe:CPE2208 CTP synthetase (EC:6.3.4.2)                 K01937     535      100 (    -)      29    0.321    81       -> 1
cpf:CPF_2472 CTP synthetase (EC:6.3.4.2)                K01937     535      100 (    -)      29    0.321    81       -> 1
cpr:CPR_2182 CTP synthetase (EC:6.3.4.2)                K01937     535      100 (    -)      29    0.321    81       -> 1
esc:Entcl_1162 N-acetyltransferase GCN5                 K09181     882      100 (    -)      29    0.340    50       -> 1
fve:101306100 endoglucanase 3-like                                 486      100 (    0)      29    0.316    79      <-> 2
ica:Intca_3623 inositol 1-phosphate synthase            K01858     363      100 (    -)      29    0.320    75      <-> 1
lmd:METH_12555 cell division protein FtsI               K03587     594      100 (    -)      29    0.318    85       -> 1
pbl:PAAG_04953 reduced viability upon starvation protei            261      100 (    -)      29    0.308    78      <-> 1
pge:LG71_10635 protein acetyltransferase                K09181     880      100 (    -)      29    0.459    37       -> 1
ppa:PAS_chr1-4_0051 RNA-dependent ATPase RNA helicase ( K12854    2147      100 (    -)      29    0.333    63      <-> 1
saq:Sare_2737 IucA/IucC family protein                             596      100 (    -)      29    0.311    103     <-> 1

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