SSDB Best Search Result

Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:
  

Search Result : 98 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
adl:AURDEDRAFT_56650 histone methyltransferase          K11422     153      853 (  577)     200    0.795    151     <-> 1605
aje:HCAG_04084 hypothetical protein                     K11422    1266      846 (  576)     199    0.272    1027     -> 818
act:ACLA_088100 SET domain protein                      K11422    1232      837 (  545)     197    0.266    1037     -> 914
abp:AGABI1DRAFT41599 hypothetical protein               K11422     163      836 (  543)     196    0.813    150     <-> 905
abv:AGABI2DRAFT209673 histone methyltransferase         K11422     163      836 (  545)     196    0.813    150     <-> 852
afm:AFUA_6G06335 SET domain protein                     K11422    1241      802 (  492)     189    0.260    1057     -> 929
aga:AgaP_AGAP002246 AGAP002246-PA                       K11422    2003      788 (  271)     185    0.263    1043     -> 989
abe:ARB_00972 hypothetical protein                      K11422    1363      764 (  481)     180    0.273    986      -> 981
aag:AaeL_AAEL010807 hypothetical protein                K11422    1670      740 (  169)     175    0.452    294      -> 1199
ago:AGOS_ABR136W ABR136Wp                               K11422     975      684 (  423)     162    0.295    747     <-> 254
afv:AFLA_037970 SET domain protein                      K11422    1024      655 (  351)     155    0.315    540     <-> 876
acs:100560745 lysine (K)-specific methyltransferase 2A  K09186    3930      518 (   17)     124    0.261    605     <-> 1282
acan:ACA1_142030 SET domain containing protein          K11423     981      416 (  188)     101    0.280    407      -> 1424
adk:Alide2_4540 nuclear protein SET                     K07117     183      345 (  208)      84    0.404    146     <-> 13
adn:Alide_4199 nuclear protein set                      K07117     183      345 (  208)      84    0.404    146     <-> 15
aaa:Acav_4557 nuclear protein SET                       K07117     184      341 (  206)      84    0.374    147     <-> 21
aav:Aave_4628 nuclear protein SET                       K07117     184      338 (  168)      83    0.367    147     <-> 24
ack:C380_23375 nuclear protein SET                      K07117     196      327 (  181)      80    0.374    147     <-> 14
aka:TKWG_01965 hypothetical protein                     K07117     169      251 (   78)      63    0.317    142     <-> 14
aca:ACP_0167 SET domain-containing protein              K07117     176      248 (  124)      62    0.373    134     <-> 14
aba:Acid345_2228 nuclear protein SET                    K07117     158      245 (   79)      62    0.322    143     <-> 32
acm:AciX9_1920 nuclear protein SET                      K07117     147      232 (   57)      59    0.321    134     <-> 25
abad:ABD1_03710 ribonuclease E (EC:3.1.26.12)           K08300    1110      220 (   39)      56    0.233    421      -> 14
actn:L083_1509 hypothetical protein                               1220      219 (   22)      56    0.212    600      -> 64
abaz:P795_15300 ribonuclease E                          K08300    1110      217 (   40)      55    0.233    421      -> 16
adi:B5T_02740 ribonuclease, Rne/Rng family protein      K08300    1126      217 (   78)      55    0.220    400      -> 14
abb:ABBFA_003135 ribonuclease E(RNase E)                K08300    1110      216 (   44)      55    0.230    421      -> 12
abn:AB57_0478 ribonuclease E (EC:3.1.4.-)               K08300    1110      216 (   92)      55    0.230    421      -> 13
aby:ABAYE3375 ribonuclease E (RNase E): endoribonucleas K08300    1110      216 (   44)      55    0.230    421      -> 13
abo:ABO_1060 phosphoric diester hydrolase (EC:3.1.4.-)  K08300    1074      214 (   87)      55    0.230    404      -> 13
abm:ABSDF3110 ribonuclease E (EC:3.1.4.-)               K08300    1110      213 (   40)      54    0.230    421      -> 15
abab:BJAB0715_00437 Ribonucleases G and E               K08300    1110      212 (   35)      54    0.230    421      -> 13
abaj:BJAB0868_00458 Ribonucleases G and E               K08300    1110      211 (   32)      54    0.228    421      -> 15
abc:ACICU_00410 ribonuclease G and E                    K08300    1110      211 (   32)      54    0.228    421      -> 12
abd:ABTW07_0440 ribonuclease G and E                    K08300    1110      211 (   32)      54    0.228    421      -> 15
abh:M3Q_654 Ribonuclease E RNase E                      K08300    1110      211 (   32)      54    0.228    421      -> 16
abj:BJAB07104_00454 Ribonucleases G and E               K08300    1110      211 (   32)      54    0.228    421      -> 14
abr:ABTJ_03375 ribonuclease, Rne/Rng family             K08300    1110      211 (   32)      54    0.228    421      -> 16
abx:ABK1_0439 Ribonuclease E RNase E                    K08300    1110      211 (   83)      54    0.228    421      -> 15
abz:ABZJ_00438 ribonuclease G and E                     K08300    1110      211 (   32)      54    0.228    421      -> 14
agr:AGROH133_07019 outer membrane protein, OmpA family             771      211 (   49)      54    0.210    443      -> 20
acb:A1S_0403 ribonuclease E                             K08300    1041      207 (   39)      53    0.228    421      -> 9
alt:ambt_10030 RNase E                                  K08300    1100      205 (   40)      53    0.205    541      -> 15
aci:ACIAD0438 ribonuclease E (RNase E): endoribonucleas K08300    1138      198 (   87)      51    0.206    418      -> 9
acn:ACIS_00832 hypothetical protein                                951      193 (   26)      50    0.198    703      -> 13
aal:EP13_08510 ribonuclease                             K08300    1100      191 (   26)      49    0.213    483      -> 13
acc:BDGL_003310 ribonuclease E (RNase E): endoribonucle K08300    1107      191 (   36)      49    0.209    383      -> 10
acy:Anacy_2852 translation initiation factor IF-2       K02519    1044      188 (   45)      49    0.254    335      -> 29
aad:TC41_2418 hypothetical protein                                1097      186 (   66)      48    0.197    589      -> 6
aas:Aasi_1714 hypothetical protein                                 891      183 (   44)      48    0.187    787      -> 19
afs:AFR_25590 hypothetical protein                                1998      183 (    1)      48    0.222    514      -> 73
ade:Adeh_1102 translation initiation factor IF-2        K02519     950      173 (   33)      45    0.221    344      -> 25
acd:AOLE_04360 group A colicins tolerance protein       K03646     487      172 (    4)      45    0.171    438      -> 16
alv:Alvin_0954 protein TolA                             K03646     457      165 (   11)      43    0.222    347      -> 31
acr:Acry_0536 hypothetical protein                                 505      164 (    3)      43    0.199    478      -> 15
aex:Astex_0207 hypothetical protein                                545      162 (   11)      43    0.216    436      -> 12
abs:AZOBR_170006 ribonuclease E                         K08300    1057      161 (    3)      43    0.223    391      -> 35
aai:AARI_07740 hypothetical protein                                865      159 (   17)      42    0.206    597      -> 27
aha:AHA_2239 ribonuclease E (EC:3.1.4.-)                K08300    1039      159 (    3)      42    0.271    155      -> 13
afd:Alfi_3192 transcription termination factor Rho      K03628     576      157 (   28)      42    0.234    244      -> 8
ahp:V429_12105 ribonuclease                             K08300    1043      156 (   13)      41    0.265    155      -> 15
ahr:V428_12090 ribonuclease                             K08300    1043      156 (   13)      41    0.265    155      -> 16
ahy:AHML_11745 ribonuclease E                           K08300    1030      156 (   13)      41    0.265    155      -> 15
aeh:Mlg_1430 ribonuclease E (EC:3.1.4.-)                K08300    1073      155 (   44)      41    0.220    486      -> 7
aat:D11S_1488 autotransporter adhesin                              836      154 (   23)      41    0.189    380      -> 5
acp:A2cp1_1230 translation initiation factor IF-2       K02519     951      154 (   13)      41    0.216    348      -> 26
ach:Achl_2147 ribonuclease, Rne/Rng family              K08300    1151      150 (   28)      40    0.237    334      -> 22
ahd:AI20_08220 ribonuclease                             K08300    1053      149 (    9)      40    0.224    434      -> 15
afw:Anae109_0762 RNA polymerase sigma-70 subunit RpoD   K03086     819      148 (   10)      40    0.220    313      -> 33
aap:NT05HA_1115 electron transport complex protein RnfC K03615     843      144 (   31)      39    0.266    207      -> 5
aau:AAur_2360 hypothetical protein                                 400      141 (    7)      38    0.222    405      -> 23
ahe:Arch_1646 DNA polymerase III subunits gamma/tau     K02343     848      140 (    5)      38    0.207    430      -> 9
adg:Adeg_1662 translation initiation factor IF-2        K02519     822      139 (   34)      38    0.215    340      -> 3
aac:Aaci_1168 hypothetical protein                                 985      138 (   18)      37    0.214    449      -> 10
aan:D7S_01991 opacity-associated protein OapA           K07268     440      137 (    2)      37    0.188    415      -> 6
afe:Lferr_1874 Rne/Rng family ribonuclease              K08300     782      137 (   34)      37    0.366    82       -> 3
afl:Aflv_2592 metal-dependent peptidase                           1586      137 (   23)      37    0.205    528      -> 4
afr:AFE_2220 ribonuclease, Rne/Rng family               K08300     782      137 (   15)      37    0.366    82       -> 4
afi:Acife_2980 metal-dependent phosphohydrolase HD regi            804      136 (   14)      37    0.217    543      -> 6
afo:Afer_0924 hypothetical protein                                 554      133 (   21)      36    0.205    390      -> 7
aao:ANH9381_0120 opacity-associated protein OapA        K07268     437      131 (   21)      36    0.188    415      -> 5
aah:CF65_02964 opacity associated protein, putative                437      129 (    8)      35    0.192    417      -> 5
aeq:AEQU_0014 hypothetical protein                                1042      127 (    2)      35    0.208    544      -> 9
aar:Acear_1466 TonB family protein                                 375      126 (   10)      35    0.179    363      -> 5
acu:Atc_1431 ribonuclease E                             K08300     803      126 (    5)      35    0.233    365      -> 10
ace:Acel_0064 hypothetical protein                                 898      125 (   11)      34    0.218    363      -> 13
acl:ACL_0524 hypothetical protein                                  202      118 (   12)      33    0.250    108      -> 2
afn:Acfer_1018 hypothetical protein                                503      114 (    9)      32    0.222    216      -> 2
abt:ABED_0599 N-acetylmuramoyl-L-alanine amidase        K01448     486      111 (    5)      31    0.188    336      -> 3
aae:aq_1894 hypothetical protein                                   237      109 (    -)      31    0.266    139      -> 1
abu:Abu_0270 hypothetical protein                                  401      109 (    3)      31    0.243    140      -> 3
acj:ACAM_1500 predicted P-loop ATPase                   K06957     844      109 (    -)      31    0.219    210      -> 1
abl:A7H1H_0689 TonB-dependent receptor protein          K03832     227      108 (    2)      30    0.224    174      -> 3
aho:Ahos_1554 ParB domain-containing protein, nuclease             440      106 (    4)      30    0.235    247      -> 2
aco:Amico_1277 hypothetical protein                                232      105 (    1)      30    0.278    97       -> 2
ain:Acin_1014 transcriptional regulator                 K01448     323      103 (    1)      29    0.232    271      -> 4
abra:BN85315060 hypothetical protein                               195      102 (    2)      29    0.242    132      -> 2
acf:AciM339_0909 putative archaeal flagellar protein D/            339      102 (    2)      29    0.228    197      -> 2

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]