SSDB Gene Cluster Search Result
KEGG ID :
rpd:RPD_3490
(930 a.a.)
Definition:
ATP-dependent DNA ligase (EC:6.5.1.1);
K01971
DNA ligase (ATP)
Include:
best hits
Gap size:
0
1
2
3
4
5
Sort by:
SW-score
KEGG-species
Search against:
All organisms
Selected organism group
Eukaryotes
Prokaryotes
Bacteria
Archaea
Cyanobacteria
Threshold:
100
150
200
400
rpd
RPD_3480
RPD_3481
(
K00705
)
RPD_3482
(
K16147
)
RPD_3483
(
K05343
)
RPD_3484
(
K00700
)
RPD_3485
(
K02438
)
RPD_3486
RPD_3487
(
K06044
)
RPD_3488
RPD_3489
RPD_3490
(
K01971
)
RPD_3491
RPD_3492
RPD_3493
(
K04085
)
RPD_3494
(
K03752
)
RPD_3495
(
K00001
)
RPD_3496
rpb
RPB_1886
RPB_1885
(
K00705
)
RPB_1884
(
K16147
)
RPB_1883
(
K05343
)
RPB_1882
(
K00700
)
RPB_1881
(
K02438
)
RPB_1880
RPB_1879
(
K06044
)
RPB_1878
RPB_1877
RPB_1876
(
K01971
)
RPB_1875
RPB_1874
RPB_1873
(
K04085
)
RPB_1872
(
K03752
)
RPB_1871
(
K13953
)
RPB_1870
rpx
Rpdx1_1711
Rpdx1_1710
(
K00705
)
Rpdx1_1709
(
K16147
)
Rpdx1_1708
(
K05343
)
Rpdx1_1707
(
K00700
)
Rpdx1_1706
(
K02438
)
Rpdx1_1705
(
K01236
)
Rpdx1_1704
(
K06044
)
Rpdx1_1703
Rpdx1_1702
Rpdx1_1701
(
K01971
)
Rpdx1_1700
Rpdx1_1698
Rpdx1_1697
(
K04085
)
Rpdx1_1696
(
K03752
)
Rpdx1_1695
Rpdx1_1694
rpa
RPA3640
RPA3641
(
K00705
)
RPA3642
(
K16147
)
RPA3643
(
K05343
)
RPA3644
(
K00700
)
RPA3645
(
K02438
)
RPA3646
(
K00700
)
RPA3647
(
K06044
)
RPA3648
RPA3649
RPA3650
(
K01971
)
RPA3651
RPA3652
RPA3653
(
K04085
)
RPA3654
(
K03752
)
RPA3655
(
K00001
)
RPA3656
rpt
Rpal_4161
Rpal_4162
(
K00705
)
Rpal_4163
(
K16147
)
Rpal_4164
(
K05343
)
Rpal_4165
(
K00700
)
Rpal_4166
(
K02438
)
Rpal_4167
(
K01236
)
Rpal_4168
(
K06044
)
Rpal_4169
Rpal_4170
Rpal_4171
(
K01971
)
Rpal_4172
Rpal_4173
Rpal_4174
(
K04085
)
Rpal_4175
(
K03752
)
Rpal_4176
(
K13953
)
Rpal_4177
rpc
RPC_3676
RPC_3677
(
K00705
)
RPC_3678
(
K16147
)
RPC_3679
(
K05343
)
RPC_3680
(
K00700
)
RPC_3681
(
K02438
)
RPC_1226
RPC_3682
(
K06044
)
RPC_3683
RPC_3684
RPC_3685
(
K01971
)
RPC_3686
RPC_3687
RPC_3688
(
K04085
)
RPC_3689
(
K03752
)
 
 
rpe
RPE_3714
RPE_3715
(
K00705
)
RPE_3716
(
K16147
)
RPE_3717
(
K05343
)
RPE_3718
(
K00700
)
RPE_3719
(
K02438
)
RPE_1273
(
K01236
)
RPE_3721
(
K06044
)
RPE_3722
RPE_3723
RPE_3724
(
K01971
)
RPE_3725
RPE_3726
RPE_3727
(
K04085
)
RPE_3728
(
K03752
)
 
 
bja
bll6764
bll6765
(
K00705
)
blr6766
blr6767
(
K05343
)
blr6768
(
K00700
)
blr6769
(
K02438
)
blr6770
blr6771
(
K06044
)
 
blr6772
bll6773
(
K01971
)
blr6774
bsl2593
bsr2313
(
K04085
)
bll2309
(
K03752
)
blr2780
(
K00001
)
blr1330
brs
S23_15490
S23_15480
(
K00705
)
S23_15470
(
K16147
)
S23_15460
(
K05343
)
S23_15450
(
K00700
)
S23_15440
(
K02438
)
S23_15430
(
K01236
)
S23_15420
(
K06044
)
S23_15410
S23_15400
S23_15390
(
K01971
)
S23_15380
S23_53850
S23_57200
(
K04085
)
S23_57240
(
K03752
)
S23_52140
S23_64670
bju
BJ6T_26550
BJ6T_26540
(
K00705
)
BJ6T_26530
(
K16147
)
BJ6T_26520
(
K05343
)
BJ6T_26510
(
K00700
)
BJ6T_26500
(
K02438
)
BJ6T_26490
(
K01236
)
BJ6T_26480
(
K06044
)
BJ6T_26470
BJ6T_26460
BJ6T_26450
(
K01971
)
BJ6T_26440
BJ6T_72150
BJ6T_75260
(
K04085
)
BJ6T_75300
(
K03752
)
BJ6T_69890
BJ6T_13810
bra
BRADO5814
BRADO5815
(
K00705
)
 
BRADO5816
(
K05343
)
BRADO5817
(
K00700
)
BRADO5818
(
K02438
)
BRADO5819
(
K01236
)
BRADO5820
(
K06044
)
BRADO5821
BRADO5822
BRADO5823
(
K01971
)
BRADO5824
BRADO5825
BRADO5837
(
K04085
)
BRADO5839
(
K03752
)
BRADO2457
(
K00001
)
BRADO6562
aol
S58_18050
S58_18040
(
K00705
)
 
S58_18030
(
K05343
)
S58_18020
(
K00700
)
S58_18010
(
K02438
)
S58_18000
(
K01236
)
S58_17990
(
K06044
)
S58_17980
S58_17970
S58_17960
(
K01971
)
S58_59680
S58_59690
S58_59810
(
K04085
)
S58_59830
(
K03752
)
S58_51550
S58_10440
bbt
BBta_6320
BBta_6321
(
K00705
)
 
BBta_6322
(
K05343
)
BBta_6323
(
K00700
)
BBta_6324
(
K02438
)
BBta_6325
(
K01236
)
BBta_6326
(
K06044
)
BBta_6327
BBta_6328
BBta_6329
(
K01971
)
BBta_6331
BBta_6333
BBta_6347
(
K04085
)
BBta_6349
(
K03752
)
BBta_2803
(
K00001
)
BBta_0974
(
K00459
)
azc
 
AZC_4117
(
K00705
)
 
AZC_4115
(
K05343
)
AZC_4116
(
K00700
)
 
AZC_1403
(
K01236
)
AZC_1404
(
K06044
)
AZC_4347
 
AZC_1006
(
K01971
)
AZC_1007
(
K10979
)
 
AZC_2198
(
K04085
)
AZC_1711
(
K03752
)
AZC_0320
(
K13953
)
 
mam
 
 
 
 
Mesau_05003
(
K00700
)
 
 
 
 
Mesau_03265
Mesau_00823
(
K01971
)
Mesau_00824
(
K10979
)
 
Mesau_01562
(
K04085
)
Mesau_04098
(
K03752
)
Mesau_00313
 
mop
 
 
 
 
Mesop_5453
(
K00700
)
 
 
 
 
Mesop_3386
Mesop_0815
(
K01971
)
Mesop_0814
(
K10979
)
 
Mesop_1550
(
K04085
)
Mesop_4461
(
K03752
)
Mesop_0326
 
mci
 
 
 
 
Mesci_4942
(
K00700
)
 
 
 
 
Mesci_3760
Mesci_0783
(
K01971
)
Mesci_0782
(
K10979
)
 
Mesci_1502
(
K04085
)
Mesci_3921
(
K03752
)
Mesci_3451
(
K00001
)
 
bpy
Bphyt_1239
Bphyt_6826
(
K00705
)
Bphyt_6821
(
K16147
)
Bphyt_6822
(
K05343
)
Bphyt_6823
(
K00700
)
 
Bphyt_6825
(
K01236
)
Bphyt_6827
(
K06044
)
 
 
Bphyt_1858
(
K01971
)
Bphyt_1857
(
K10979
)
 
Bphyt_2801
Bphyt_2924
(
K03752
)
 
 
gma
AciX8_1171
AciX8_1580
(
K00705
)
AciX8_1170
(
K16147
)
AciX8_1169
(
K05343
)
 
 
AciX8_1173
(
K01236
)
AciX8_1172
(
K06044
)
 
AciX8_3070
AciX8_1368
(
K01971
)
AciX8_1369
(
K10979
)
AciX8_0443
 
AciX8_3648
(
K03752
)
AciX8_4283
(
K00060
)
 
rpf
Rpic12D_1405
Rpic12D_4047
(
K00705
)
Rpic12D_4052
(
K16147
)
Rpic12D_4051
(
K05343
)
Rpic12D_4050
(
K00700
)
 
Rpic12D_4048
(
K01236
)
Rpic12D_4046
(
K06044
)
 
 
Rpic12D_0488
(
K01971
)
Rpic12D_0489
(
K10979
)
 
Rpic12D_0826
(
K04085
)
Rpic12D_0968
(
K03752
)
 
 
byi
BYI23_A008110
BYI23_B011500
(
K00705
)
BYI23_B011440
(
K16147
)
BYI23_B011450
(
K05343
)
BYI23_B011460
(
K00700
)
 
BYI23_B011490
(
K01236
)
BYI23_B011510
(
K06044
)
 
 
BYI23_A015080
(
K01971
)
BYI23_A015090
(
K10979
)
BYI23_B003000
BYI23_A018150
BYI23_A019190
(
K03752
)
 
 
tsa
AciPR4_0336
AciPR4_2212
(
K00705
)
AciPR4_3488
(
K16147
)
AciPR4_3489
(
K05343
)
 
 
AciPR4_3486
(
K01236
)
AciPR4_3487
(
K06044
)
 
AciPR4_1544
AciPR4_1657
(
K01971
)
AciPR4_1658
(
K10979
)
AciPR4_0544
 
AciPR4_2555
(
K03752
)
AciPR4_1211
(
K13953
)
 
bxe
Bxe_A3307
Bxe_B2866
(
K00705
)
Bxe_B2861
(
K16147
)
Bxe_B2862
(
K05343
)
Bxe_B2863
(
K00700
)
 
Bxe_B2865
(
K01236
)
Bxe_B2867
(
K06044
)
 
 
Bxe_A2328
(
K01971
)
Bxe_A2329
(
K10979
)
Bxe_B0669
Bxe_A1333
Bxe_A1060
(
K03752
)
 
 
bge
BC1002_0867
BC1002_5225
(
K00705
)
BC1002_5230
(
K16147
)
BC1002_5229
(
K05343
)
BC1002_5228
(
K00700
)
 
BC1002_5226
(
K01236
)
BC1002_5224
(
K06044
)
 
 
BC1002_1425
(
K01971
)
BC1002_1424
(
K10979
)
 
BC1002_2040
BC1002_2156
(
K03752
)
 
 
daf
Desaf_0087
Desaf_0926
(
K00705
)
Desaf_2976
(
K16147
)
Desaf_2975
(
K05343
)
Desaf_2974
(
K00700
)
 
Desaf_2973
Desaf_3395
(
K06044
)
 
 
Desaf_0308
(
K01971
)
Desaf_0309
(
K10979
)
 
 
Desaf_1796
(
K03752
)
 
 
rsl
RPSI07_1911
RPSI07_mp0198
(
K00705
)
RPSI07_mp0203
(
K16147
)
RPSI07_mp0202
(
K05343
)
RPSI07_mp0201
(
K00700
)
 
RPSI07_mp0199
(
K01236
)
RPSI07_mp0197
(
K06044
)
 
 
RPSI07_2772
(
K01971
)
RPSI07_2771
(
K10979
)
 
RPSI07_2533
(
K04085
)
RPSI07_2356
(
K03752
)
 
 
bgl
bglu_1g26650
bglu_2g15600
(
K00705
)
bglu_2g15550
(
K16147
)
bglu_2g15560
(
K05343
)
bglu_2g15570
(
K00700
)
 
bglu_2g15590
(
K01236
)
bglu_2g15610
(
K06044
)
 
 
bglu_1g10900
(
K01971
)
bglu_1g10890
(
K10979
)
 
bglu_1g21970
bglu_1g09380
(
K03752
)
bglu_2g20480
(
K13953
)
 
pfv
Psefu_3138
Psefu_2791
(
K00705
)
Psefu_2815
(
K16147
)
Psefu_2814
(
K05343
)
Psefu_2813
(
K00700
)
 
Psefu_2790
(
K01236
)
Psefu_2792
(
K06044
)
 
Psefu_2073
Psefu_2816
(
K01971
)
Psefu_2817
(
K10979
)
 
Psefu_1542
Psefu_2929
(
K03752
)
 
 
aca
ACP_3016
ACP_1061
(
K00705
)
ACP_0843
(
K16147
)
ACP_0842
(
K05343
)
 
 
ACP_2720
(
K01236
)
ACP_2719
(
K06044
)
 
ACP_3086
ACP_3506
(
K01971
)
ACP_3505
(
K10979
)
ACP_2856
 
ACP_3545
(
K03752
)
 
 
acm
AciX9_2882
AciX9_1204
(
K00705
)
AciX9_2883
(
K16147
)
AciX9_2884
(
K05343
)
 
 
AciX9_2880
(
K01236
)
AciX9_2881
(
K06044
)
 
AciX9_1043
AciX9_2128
(
K01971
)
AciX9_2127
(
K10979
)
AciX9_3598
 
AciX9_1727
(
K03752
)
AciX9_1798
(
K00060
)
 
phl
 
 
 
 
KKY_2047
(
K00700
)
 
 
 
 
 
KKY_1733
(
K01971
)
KKY_1734
(
K10979
)
 
KKY_3008
(
K04085
)
KKY_1305
(
K03752
)
 
 
hse
Hsero_0195
Hsero_2500
(
K00705
)
Hsero_2325
(
K16147
)
Hsero_2326
(
K05343
)
Hsero_2503
(
K00700
)
Hsero_2502
(
K02438
)
Hsero_2501
(
K01236
)
Hsero_2499
(
K06044
)
 
 
Hsero_2271
(
K01971
)
Hsero_2270
(
K10979
)
 
Hsero_3612
(
K04085
)
Hsero_1883
(
K03752
)
 
 
sch
Sphch_0399
 
 
 
Sphch_0585
(
K00700
)
 
 
 
 
 
Sphch_2999
(
K01971
)
Sphch_3000
(
K10979
)
 
Sphch_0054
Sphch_1716
(
K03752
)
Sphch_4197
(
K13953
)
 
bbm
 
BN115_2278
(
K00705
)
BN115_2283
(
K16147
)
BN115_2282
(
K05343
)
BN115_2281
(
K00700
)
 
BN115_2279
(
K01236
)
BN115_2277
(
K06044
)
 
 
BN115_2300
(
K01971
)
BN115_2301
(
K10979
)
 
BN115_1961
(
K04085
)
BN115_2921
(
K03752
)
 
 
bbr
 
BB2867
(
K00705
)
BB2862
(
K16147
)
BB2863
(
K05343
)
BB2864
(
K00700
)
BB2865
(
K02438
)
BB2866
(
K01236
)
BB2868
(
K06044
)
 
 
BB2845
(
K01971
)
BB2844
(
K10979
)
 
BB3190
(
K04085
)
BB2115
(
K03752
)
 
 
bbh
 
BN112_0669
(
K00705
)
BN112_0664
(
K16147
)
BN112_0665
(
K05343
)
BN112_0666
(
K00700
)
 
BN112_0668
(
K01236
)
BN112_0670
(
K06044
)
 
 
BN112_0647
(
K01971
)
BN112_0646
(
K10979
)
 
BN112_0992
(
K04085
)
BN112_1402
(
K03752
)
 
 
bpz
BP1026B_I2430
BP1026B_I2061
(
K00705
)
BP1026B_I2056
(
K16147
)
BP1026B_I2057
(
K05343
)
BP1026B_I2058
(
K00700
)
BP1026B_I2059
(
K02438
)
BP1026B_I2060
(
K01236
)
BP1026B_I2062
(
K06044
)
 
 
BP1026B_II2379
(
K01971
)
BP1026B_II2380
(
K10979
)
 
BP1026B_I1956
BP1026B_I0861
(
K03752
)
 
 
bpd
BURPS668_1181
BURPS668_1540
(
K00705
)
BURPS668_1545
(
K16147
)
BURPS668_1544
(
K05343
)
BURPS668_1543
(
K00700
)
BURPS668_1542
(
K02438
)
BURPS668_1541
(
K01236
)
BURPS668_1539
(
K06044
)
 
 
BURPS668_A3112
(
K01971
)
BURPS668_A3113
(
K10979
)
 
BURPS668_1662
BURPS668_2804
(
K03752
)
 
 
bps
BPSL1107
BPSL2079
(
K00705
)
BPSL2074
(
K16147
)
BPSL2075
(
K05343
)
BPSL2076
(
K00700
)
BPSL2077
(
K02438
)
BPSL2078
(
K01236
)
BPSL2080
(
K06044
)
 
 
BPSS2211
(
K01971
)
BPSS2212
(
K10979
)
 
BPSL1987
BPSL2454
(
K03752
)
 
 
bpl
BURPS1106A_1189
BURPS1106A_1563
(
K00705
)
BURPS1106A_1568
(
K16147
)
BURPS1106A_1567
(
K05343
)
BURPS1106A_1566
(
K00700
)
BURPS1106A_1565
(
K02438
)
BURPS1106A_1564
(
K01236
)
BURPS1106A_1562
(
K06044
)
 
 
BURPS1106A_A2988
(
K01971
)
BURPS1106A_A2989
(
K10979
)
 
BURPS1106A_1684
BURPS1106A_2865
(
K03752
)
 
 
bpq
BPC006_I1238
BPC006_I1610
(
K00705
)
BPC006_I1615
(
K16147
)
BPC006_I1614
(
K05343
)
BPC006_I1613
(
K00700
)
BPC006_I1612
(
K02438
)
BPC006_I1611
(
K01236
)
BPC006_I1609
(
K06044
)
 
 
BPC006_II2938
(
K01971
)
BPC006_II2939
(
K10979
)
 
BPC006_I1730
BPC006_I2904
(
K03752
)
 
 
tmo
 
TMO_a0211
(
K00705
)
TMO_a0215
(
K16147
)
TMO_a0214
(
K05343
)
TMO_a0213
(
K00700
)
 
 
TMO_a0107
(
K06044
)
 
 
TMO_a0311
(
K01971
)
TMO_a0312
(
K10979
)
 
TMO_2802
TMO_1199
(
K03752
)
TMO_b0416
 
afw
Anae109_2373
Anae109_0318
(
K00705
)
Anae109_3071
(
K16147
)
Anae109_2968
(
K05343
)
Anae109_3070
(
K00700
)
 
Anae109_3802
(
K01236
)
Anae109_0317
(
K06044
)
 
 
Anae109_0939
(
K01971
)
Anae109_0938
(
K10979
)
 
Anae109_2274
Anae109_3593
(
K03752
)
 
 
bbat
Bdt_3091
(
K07029
)
Bdt_0961
 
 
Bdt_1213
(
K01176
)
 
 
 
 
 
Bdt_2206
(
K01971
)
Bdt_2207
(
K10979
)
 
 
 
 
 
cpi
Cpin_2805
 
 
Cpin_5642
(
K05343
)
Cpin_3094
(
K00700
)
 
Cpin_2574
(
K01236
)
Cpin_2573
(
K06044
)
 
 
Cpin_0998
(
K01971
)
Cpin_0997
(
K10979
)
Cpin_6405
 
Cpin_0203
(
K03752
)
Cpin_5967
 
bba
Bd3162
(
K07029
)
 
 
 
 
 
 
 
 
 
Bd2252
(
K01971
)
Bd2254
(
K10979
)
 
 
 
Bd2813
(
K13953
)
 
fjo
 
 
Fjoh_1210
Fjoh_1399
Fjoh_2745
(
K00700
)
 
 
 
 
 
Fjoh_3303
(
K01971
)
Fjoh_3304
(
K10979
)
 
 
Fjoh_4642
(
K03752
)
Fjoh_4167
(
K13953
)
 
hoh
Hoch_2631
Hoch_1931
(
K00705
)
Hoch_4097
(
K16147
)
Hoch_4096
(
K05343
)
Hoch_4095
(
K00700
)
 
Hoch_4560
(
K01236
)
Hoch_4561
(
K06044
)
 
 
Hoch_3330
(
K01971
)
Hoch_3329
(
K10979
)
 
 
Hoch_6006
(
K03752
)
 
 
asl
 
Aeqsu_2678
 
Aeqsu_2293
Aeqsu_0677
 
 
 
 
 
Aeqsu_3115
(
K01971
)
Aeqsu_3116
(
K10979
)
 
 
 
 
 
gfo
GFO_1042
(
K01238
)
GFO_0699
(
K01804
)
GFO_2132
(
K01238
)
 
GFO_2997
(
K00700
)
 
 
 
 
 
GFO_0300
(
K01971
)
GFO_0299
(
K10979
)
 
 
 
GFO_2086
(
K13953
)
 
aza
 
 
 
 
 
 
AZKH_2631
(
K01236
)
AZKH_2630
 
AZKH_2001
AZKH_2968
(
K01971
)
AZKH_2967
(
K10979
)
 
AZKH_1641
(
K04085
)
AZKH_0068
(
K03752
)
AZKH_3406
(
K13953
)
 
bcv
Bcav_0183
Bcav_2633
(
K00705
)
Bcav_1337
(
K16147
)
Bcav_1336
(
K05343
)
Bcav_1334
(
K00700
)
 
Bcav_1971
(
K01236
)
Bcav_1972
(
K06044
)
 
 
Bcav_0653
(
K01971
)
Bcav_0652
(
K10979
)
 
 
 
 
 
art
Arth_3442
Arth_2153
(
K00705
)
Arth_0737
(
K16147
)
Arth_0738
(
K05343
)
Arth_0739
(
K00700
)
 
Arth_2907
(
K01236
)
Arth_2908
(
K06044
)
 
 
Arth_0294
(
K01971
)
Arth_0295
(
K10979
)
 
 
 
Arth_3087
(
K13953
)
 
tpr
Tpau_2783
 
Tpau_1279
(
K16147
)
 
Tpau_1278
(
K00700
)
 
 
 
 
 
Tpau_0201
(
K01971
)
Tpau_0202
(
K10979
)
 
 
 
Tpau_2018
(
K13979
)
 
bcl
 
 
 
 
 
 
 
 
 
 
ABC1601
(
K01971
)
ABC1602
(
K10979
)
 
 
ABC0892
(
K03752
)
ABC0046
(
K13953
)
 
pmq
PM3016_1852
 
 
 
PM3016_3096
(
K00700
)
 
 
 
 
 
PM3016_4943
(
K01971
)
PM3016_4944
(
K10979
)
 
PM3016_1656
PM3016_938
(
K03752
)
PM3016_3973
(
K13979
)
 
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