SSDB Motif Search Result


Organism : Pseudarthrobacter phenanthrenivorans
Gene : Asphe3_04250
Definition : ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD ligase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Motif idFromToDefinitionE valueScore
pf:DNA_primase_S141205Eukaryotic and archaeal DNA primase small subunit 0.076-
pf:LigD_N333424 7.8e-31-
pf:DNA_ligase_A_M540720ATP dependent DNA ligase domain 4.3e-33-
pf:DNA_ligase_OB_2734830 0.033-
pf:DNA_ligase_A_C740833ATP dependent DNA ligase C terminal region 2.1e-26-

apn:Asphe3_04250 pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C


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