SSDB Motif Search Result


Organism : Amycolicicoccus subflavus
Gene : AS9A_4180
Definition : ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Motif idFromToDefinitionE valueScore
pf:DNA_primase_S142217Eukaryotic and archaeal DNA primase small subunit 0.0063-
pf:LigD_N330430 3.9e-36-
pf:DNA_ligase_A_M459635ATP dependent DNA ligase domain 5e-29-
pf:mRNA_cap_enzyme465579mRNA capping enzyme, catalytic domain 0.012-
pf:RNA_ligase512608RNA ligase 0.049-
pf:DNA_ligase_OB_2649749 0.005-
pf:DNA_ligase_A_C655749ATP dependent DNA ligase C terminal region 1.7e-20-

asd:AS9A_4180 pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C


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