| Motif id | From | To | Definition | E value | Score |
| pf:zf-PARP | 16 | 101 | Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
| 4.9e-24 | - |
| pf:DNA_ligase_A_N | 176 | 348 | DNA ligase N terminus
| 1.2e-44 | - |
| pf:DNA_ligase_A_M | 392 | 586 | ATP dependent DNA ligase domain
| 1.1e-57 | - |
| pf:mRNA_cap_enzyme | 462 | 533 | mRNA capping enzyme, catalytic domain
| 0.0049 | - |
| pf:DNA_ligase_A_C | 617 | 723 | ATP dependent DNA ligase C terminal region
| 6.5e-17 | - |
| pf:zf-CCHH | 811 | 834 | Zinc-finger (CX5CX6HX5H) motif
| 3.3e-08 | - |
| pf:BRCT | 870 | 920 | BRCA1 C Terminus (BRCT) domain
| 0.047 | - |