| Motif id | From | To | Definition | E value | Score |
| pf:LigD_N | 50 | 159 | | 1.7e-44 | - |
| pf:HC2 | 215 | 261 | Histone H1-like nucleoprotein HC2
| 0.36 | - |
| pf:DNA_ligase_A_M | 273 | 460 | ATP dependent DNA ligase domain
| 2e-27 | - |
| pf:DNA_ligase_A_C | 479 | 574 | ATP dependent DNA ligase C terminal region
| 4e-30 | - |
| pf:DNA_primase_S | 729 | 849 | Eukaryotic and archaeal DNA primase small subunit
| 1.3e-10 | - |