SSDB Motif Search Result
Organism :
Corallococcus coralloides
Gene :
COCOR_00956
Definition :
ligD; ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
Motif id
From
To
Definition
E value
Score
pf:LigD_N
42
149
5.8e-39
-
pf:DNA_ligase_A_M
232
410
ATP dependent DNA ligase domain
3.8e-31
-
pf:mRNA_cap_enzyme
253
355
mRNA capping enzyme, catalytic domain
0.042
-
pf:DNA_ligase_OB_2
429
519
0.0023
-
pf:DNA_ligase_A_C
431
522
ATP dependent DNA ligase C terminal region
1e-23
-
pf:DNA_primase_S
700
808
Eukaryotic and archaeal DNA primase small subunit
1.7e-05
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]