SSDB Motif Search Result
Organism :
Corallococcus coralloides
Gene :
COCOR_00956
Definition :
no KO assigned | (GenBank) ligD; ATP dependent DNA ligase
Motif id
From
To
Definition
E value
Score
pf:LigD_N
42
148
DNA polymerase Ligase (LigD)
8.7e-37
-
pf:DNA_ligase_A_M
232
410
ATP dependent DNA ligase domain
2.2e-30
-
pf:RNA_ligase
251
410
RNA ligase
3.2e-06
-
pf:mRNA_cap_enzyme
317
357
mRNA capping enzyme, catalytic domain
0.14
-
pf:DNA_ligase_OB_2
429
519
DNA ligase OB-like domain
0.029
-
pf:DNA_ligase_A_C
432
522
ATP dependent DNA ligase C terminal region
4.3e-22
-
pf:DNA_primase_S
700
738
DNA primase small subunit
0.18
-
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GENES
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KEGG2
|
KEGG
|
GenomeNet
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