| Motif id | From | To | Definition | E value | Score |
| pf:SET | 206 | 312 | SET domain
| 2.1e-22 | - |
| pf:Med26 | 457 | 505 | TFIIS helical bundle-like domain
| 0.013 | - |
| pf:WW | 598 | 625 | WW domain
| 0.00013 | - |
| pf:SRI | 691 | 775 | SRI (Set2 Rpb1 interacting) domain
| 1.8e-21 | - |
| pf:DUF3287 | 734 | 783 | Protein of unknown function (DUF3287)
| 0.01 | - |
| pf:CENP-X | 734 | 786 | CENP-S associating Centromere protein X
| 0.25 | - |