| Motif id | From | To | Definition | E value | Score |
| pf:SET | 192 | 298 | SET domain
| 2.2e-22 | - |
| pf:Med26 | 454 | 487 | TFIIS helical bundle-like domain
| 0.021 | - |
| pf:DUF1675 | 591 | 746 | Protein of unknown function (DUF1675)
| 0.66 | - |
| pf:SRI | 636 | 724 | SRI (Set2 Rpb1 interacting) domain
| 1.3e-21 | - |