SSDB Motif Search Result


Organism : Calditerrivibrio nitroreducens
Gene : Calni_0428
Definition : type II site-specific deoxyribonuclease (EC:3.1.21.4); K01155 type II restriction enzyme [EC:3.1.21.4]
Motif idFromToDefinitionE valueScore
pf:DRP3256Dam-replacing family 2.7e-114-
pf:zinc-ribbons_63074 0.0033-
pf:DZR3267Double zinc ribbon 0.0067-
pf:zf-ribbon_33561 0.039-
pf:OrfB_Zn_ribbon3564Putative transposase DNA-binding domain 0.17-
pf:RNA_POL_M_15KD3666RNA polymerases M/15 Kd subunit 0.49-
pf:DUF21974969Uncharacterized protein conserved in bacteria (DUF2197) 0.24-
pf:SporV_AA167207Stage V sporulation protein AA 0.23-

cni:Calni_0428 pf:DRP pf:zinc-ribbons_6 pf:DZR pf:zf-ribbon_3 pf:OrfB_Zn_ribbon pf:RNA_POL_M_15KD pf:DUF2197 pf:SporV_AA

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