SSDB Motif Search Result


Organism : Ruminiclostridium thermocellum ATCC 27405
Gene : Cthe_1938
Definition : ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]
Motif idFromToDefinitionE valueScore
pf:Dala_Dala_lig_N6140D-ala D-ala ligase N-terminus 2.7e-34-
pf:ATP-grasp_4149331 7.1e-22-
pf:GARS_A150251Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 6.8e-05-
pf:Dala_Dala_lig_C158361D-ala D-ala ligase C-terminus 1.5e-83-
pf:ATP-grasp159330ATP-grasp domain 3.9e-11-
pf:RimK177341RimK-like ATP-grasp domain 3.4e-05-
pf:CPSase_L_D2186331Carbamoyl-phosphate synthase L chain, ATP binding domain 7.3e-12-
pf:ATP-grasp_3192331ATP-grasp domain 1.2e-06-
pf:MCR_beta_N235301Methyl-coenzyme M reductase beta subunit, N-terminal domain 0.11-
pf:FAD_binding_9284323Siderophore-interacting FAD-binding domain 0.49-

cth:Cthe_1938 pf:Dala_Dala_lig_N pf:ATP-grasp_4 pf:GARS_A pf:Dala_Dala_lig_C pf:ATP-grasp pf:RimK pf:CPSase_L_D2 pf:ATP-grasp_3 pf:MCR_beta_N pf:FAD_binding_9


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