SSDB Motif Search Result
Organism :
Dinoroseobacter shibae
Gene :
Dshi_2471
Definition :
K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] | (GenBank) murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
Motif id
From
To
Definition
E value
Score
pf:Mur_ligase
22
102
Mur ligase family, catalytic domain
5.3e-10
-
pf:LpxD
49
100
0.042
-
pf:Mur_ligase_M
112
314
Mur ligase middle domain
5.6e-51
-
pf:Mur_ligase_C
335
420
Mur ligase family, glutamate ligase domain
2.6e-24
-
pf:ADH_zinc_N
338
380
Zinc-binding dehydrogenase
0.39
-
pf:DUF2249
435
457
Uncharacterized conserved protein (DUF2249)
0.79
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]