SSDB Motif Search Result


Organism : Dinoroseobacter shibae
Gene : Dshi_2471
Definition : K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] | (GenBank) murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
Motif idFromToDefinitionE valueScore
pf:Mur_ligase22102Mur ligase family, catalytic domain 5.3e-10-
pf:LpxD49100 0.042-
pf:Mur_ligase_M112314Mur ligase middle domain 5.6e-51-
pf:Mur_ligase_C335420Mur ligase family, glutamate ligase domain 2.6e-24-
pf:ADH_zinc_N338380Zinc-binding dehydrogenase 0.39-
pf:DUF2249435457Uncharacterized conserved protein (DUF2249) 0.79-

dsh:Dshi_2471 pf:Mur_ligase pf:LpxD pf:Mur_ligase_M pf:Mur_ligase_C pf:ADH_zinc_N pf:DUF2249


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