| Motif id | From | To | Definition | E value | Score |
| pf:DNA_ligase_A_N | 281 | 448 | DNA ligase N terminus
| 3.7e-22 | - |
| pf:DDR | 415 | 473 | Diol dehydratase reactivase ATPase-like domain
| 0.054 | - |
| pf:DNA_ligase_A_M | 526 | 730 | ATP dependent DNA ligase domain
| 1.8e-67 | - |
| pf:DNA_ligase_A_C | 755 | 866 | ATP dependent DNA ligase C terminal region
| 4.7e-24 | - |