| Motif id | From | To | Definition | E value | Score |
| pf:CPSase_sm_chain | 4 | 138 | Carbamoyl-phosphate synthase small chain, CPSase domain
| 8.8e-47 | - |
| pf:GATase | 181 | 356 | Glutamine amidotransferase class-I
| 1.1e-50 | - |
| pf:Peptidase_C26 | 242 | 304 | Peptidase C26
| 0.001 | - |
| pf:CPSase_L_D2 | 514 | 716 | Carbamoyl-phosphate synthase L chain, ATP binding domain
| 1.6e-82 | - |
| pf:ATP-grasp | 525 | 686 | ATP-grasp domain
| 1.4e-05 | - |
| pf:Dala_Dala_lig_C | 539 | 685 | D-ala D-ala ligase C-terminus
| 9.2e-11 | - |
| pf:ATP-grasp_3 | 546 | 688 | ATP-grasp domain
| 0.058 | - |
| pf:ATPgrasp_Ter | 650 | 713 | ATP-grasp in the biosynthetic pathway with Ter operon
| 0.0022 | - |
| pf:CPSase_L_D3 | 802 | 880 | Carbamoyl-phosphate synthetase large chain, oligomerisation domain
| 5.9e-27 | - |
| pf:ATP-grasp_3 | 1049 | 1222 | ATP-grasp domain
| 0.15 | - |
| pf:GARS_A | 1056 | 1222 | Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
| 0.0097 | - |
| pf:ATP-grasp | 1060 | 1222 | ATP-grasp domain
| 6.8e-10 | - |
| pf:CPSase_L_D2 | 1069 | 1250 | Carbamoyl-phosphate synthase L chain, ATP binding domain
| 2e-25 | - |
| pf:Dala_Dala_lig_C | 1070 | 1220 | D-ala D-ala ligase C-terminus
| 5.1e-06 | - |
| pf:GSH-S_ATP | 1088 | 1201 | Prokaryotic glutathione synthetase, ATP-grasp domain
| 0.2 | - |
| pf:ATPgrasp_Ter | 1135 | 1251 | ATP-grasp in the biosynthetic pathway with Ter operon
| 9.4e-05 | - |
| pf:MGS | 1330 | 1433 | MGS-like domain
| 1.7e-17 | - |
| pf:Amidohydro_1 | 1470 | 1520 | Amidohydrolase family
| 1.3e-07 | - |
| pf:OTCace_N | 1954 | 2095 | Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
| 2.1e-43 | - |
| pf:OTCace | 2102 | 2250 | Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
| 3.5e-33 | - |