SSDB Motif Search Result


Organism : Herbaspirillum seropedicae
Gene : Hsero_2271
Definition : ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Motif idFromToDefinitionE valueScore
pf:LigD_N42146 2.4e-38-
pf:DNA_ligase_A_M210403ATP dependent DNA ligase domain 2e-29-
pf:RNA_ligase273403RNA ligase 4.3e-05-
pf:DNA_ligase_A_C422517ATP dependent DNA ligase C terminal region 2.7e-25-
pf:DNA_primase_S682729Eukaryotic and archaeal DNA primase small subunit 0.018-

hse:Hsero_2271 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_primase_S


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