| Motif id | From | To | Definition | E value | Score |
| pf:ATP-synt_ab_N | 29 | 95 | ATP synthase alpha/beta family, beta-barrel domain
| 5.2e-17 | - |
| pf:ATPase | 150 | 192 | KaiC
| 0.3 | - |
| pf:ATP-synt_ab | 152 | 375 | ATP synthase alpha/beta family, nucleotide-binding domain
| 3.8e-78 | - |
| pf:TniB | 153 | 214 | Bacterial TniB protein
| 0.5 | - |
| pf:ATP-synt_ab_C | 382 | 507 | ATP synthase alpha/beta chain, C terminal domain
| 1.2e-49 | - |